Cow genome map

Conread name: Ss1.1-Thy1-THY010080G11.5

Conread position: 1-124
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 1-192
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 11

Conread position: 1-206
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 124, 79

Conread position: 1-207
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 66, 129

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 63

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 63

Conread position: 1-207
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 21

Conread position: 1-208
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 125, 63

Conread position: 1-225
Cow position:
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 124, 144

Conread position: 1-228
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 126, 58

Conread position: 1-243
Cow position:
Alignm length: 248
Alignm identity: 165
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 91, 75

Conread position: 1-251
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 120, 66

Conread position: 1-255
Cow position:
Alignm length: 258
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 125, 159

Conread position: 1-255
Cow position:
Alignm length: 261
Alignm identity: 173
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 71, 59

Conread position: 1-274
Cow position:
Alignm length: 279
Alignm identity: 188
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 127, 77

Conread position: 1-288
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 124, 8

Conread position: 1-293
Cow position:
Alignm length: 304
Alignm identity: 197
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 1-299
Cow position:
Alignm length: 310
Alignm identity: 208
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 87, 40

Conread position: 1-300
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 161

Conread position: 1-306
Cow position:
Alignm length: 313
Alignm identity: 216
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 71, 25

Conread position: 1-316
Cow position:
Alignm length: 321
Alignm identity: 219
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 127, 59

Conread position: 1-328
Cow position:
Alignm length: 336
Alignm identity: 229
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 27

Conread position: 1-332
Cow position:
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 86

Conread position: 1-332
Cow position:
Alignm length: 337
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 209, 63

Conread position: 1-333
Cow position:
Alignm length: 340
Alignm identity: 221
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 208, 63

Conread position: 1-333
Cow position:
Alignm length: 339
Alignm identity: 223
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 124, 63

Conread position: 1-333
Cow position:
Alignm length: 342
Alignm identity: 217
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 124, 63

Conread position: 1-333
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 125, 47

Conread position: 1-336
Cow position:
Alignm length: 347
Alignm identity: 238
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 83, 74

Conread position: 1-337
Cow position:
Alignm length: 347
Alignm identity: 243
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 127, 74

Conread position: 1-337
Cow position:
Alignm length: 344
Alignm identity: 237
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 125, 66

Conread position: 1-337
Cow position:
Alignm length: 350
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 92, 168

Conread position: 1-338
Cow position:
Alignm length: 349
Alignm identity: 229
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 63

Conread position: 1-339
Cow position:
Alignm length: 344
Alignm identity: 226
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 211, 62

Conread position: 2-242
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 122, 62

Conread position: 2-333
Cow position:
Alignm length: 339
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 208, 62

Conread position: 2-338
Cow position:
Alignm length: 345
Alignm identity: 225
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 62

Conread position: 2-340
Cow position:
Alignm length: 348
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 160

Conread position: 2-344
Cow position:
Alignm length: 345
Alignm identity: 237
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 245, 62

Conread position: 2-345
Cow position:
Alignm length: 350
Alignm identity: 234
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 124, 62

Conread position: 3-255
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 122, 61

Conread position: 3-283
Cow position:
Alignm length: 287
Alignm identity: 187
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 83, 61

Conread position: 3-292
Cow position:
Alignm length: 296
Alignm identity: 205
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 68, 158

Conread position: 3-312
Cow position:
Alignm length: 319
Alignm identity: 214
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 159, 123

Conread position: 3-328
Cow position:
Alignm length: 337
Alignm identity: 213
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 65

Conread position: 3-336
Cow position:
Alignm length: 357
Alignm identity: 239
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 70, 163

Conread position: 4-180
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 5-207
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 59

Conread position: 5-355
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 39

Conread position: 6-250
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 119, 58

Conread position: 6-328
Cow position:
Alignm length: 338
Alignm identity: 229
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 104, 58

Conread position: 6-333
Cow position:
Alignm length: 339
Alignm identity: 228
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 120, 21

Conread position: 6-337
Cow position:
Alignm length: 340
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 34

Conread position: 7-206
Cow position:
Alignm length: 203
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 7-333
Cow position:
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 37

Conread position: 11-250
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 197, 53

Conread position: 11-255
Cow position:
Alignm length: 249
Alignm identity: 168
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 67, 150

Conread position: 11-330
Cow position:
Alignm length: 329
Alignm identity: 222
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 31

Conread position: 11-333
Cow position:
Alignm length: 333
Alignm identity: 223
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 114, 53

Conread position: 11-336
Cow position:
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 148

Conread position: 12-204
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 52

Conread position: 12-207
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 113, 155

Conread position: 12-207
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 184

Conread position: 12-219
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 61

Conread position: 12-227
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 150

Conread position: 12-255
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 114, 52

Conread position: 12-255
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 74, 52

Conread position: 12-269
Cow position:
Alignm length: 261
Alignm identity: 171
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 15

Conread position: 12-302
Cow position:
Alignm length: 303
Alignm identity: 197
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 119, 106

Conread position: 12-306
Cow position:
Alignm length: 304
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 96

Conread position: 12-333
Cow position:
Alignm length: 328
Alignm identity: 215
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 113, 52

Conread position: 12-333
Cow position:
Alignm length: 331
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 68

Conread position: 12-333
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 111, 55

Conread position: 12-333
Cow position:
Alignm length: 341
Alignm identity: 223
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 55

Conread position: 12-334
Cow position:
Alignm length: 334
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 52

Conread position: 12-337
Cow position:
Alignm length: 337
Alignm identity: 235
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 113, 147

Conread position: 12-337
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 117, 63

Conread position: 12-337
Cow position:
Alignm length: 330
Alignm identity: 218
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 191, 52

Conread position: 12-337
Cow position:
Alignm length: 340
Alignm identity: 229
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 145

Conread position: 12-355
Cow position:
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 56

Conread position: 13-333
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 112, 145

Conread position: 13-345
Cow position:
Alignm length: 341
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 145

Conread position: 14-328
Cow position:
Alignm length: 323
Alignm identity: 216
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 57

Conread position: 15-255
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 52

Conread position: 15-338
Cow position:
Alignm length: 331
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 36

Conread position: 17-301
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 109, 47

Conread position: 17-345
Cow position:
Alignm length: 338
Alignm identity: 225
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 50

Conread position: 18-266
Cow position:
Alignm length: 252
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 191, 7

Conread position: 20-249
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 74

Conread position: 20-274
Cow position:
Alignm length: 262
Alignm identity: 179
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 105, 140

Conread position: 21-207
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 105, 45

Conread position: 21-210
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 49, 141

Conread position: 21-220
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 138

Conread position: 21-267
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 26

Conread position: 21-330
Cow position:
Alignm length: 323
Alignm identity: 228
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 108, 43

Conread position: 21-335
Cow position:
Alignm length: 319
Alignm identity: 209
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 104, 46

Conread position: 24-251
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 104, 27

Conread position: 24-268
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 104, 43

Conread position: 24-359
Cow position:
Alignm length: 343
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 104, 72

Conread position: 26-251
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 42

Conread position: 27-252
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 37

Conread position: 27-327
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 37

Conread position: 30-337
Cow position:
Alignm length: 314
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 33

Conread position: 42-330
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 83, 28

Conread position: 43-289
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 83, 116

Conread position: 43-310
Cow position:
Alignm length: 282
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 165, 44

Conread position: 43-331
Cow position:
Alignm length: 294
Alignm identity: 196
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 83, 21

Conread position: 45-323
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 45, 115

Conread position: 48-192
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 77, 16

Conread position: 53-267
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 89

Conread position: 59-337
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 45

Conread position: 71-331
Cow position:
Alignm length: 269
Alignm identity: 178
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 88

Conread position: 75-336
Cow position:
Alignm length: 271
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 94

Conread position: 76-333
Cow position:
Alignm length: 261
Alignm identity: 171
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 29

Conread position: 77-315
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 31

Conread position: 80-335
Cow position:
Alignm length: 261
Alignm identity: 190
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 64

Conread position: 81-334
Cow position:
Alignm length: 264
Alignm identity: 174
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 86-333
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 26

Conread position: 98-337
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 31, 90

Conread position: 141-330
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 67, 17

Conread position: 334-799
Cow position:
Alignm length: 483
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 14

Conread position: 334-799
Cow position:
Alignm length: 478
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 12

Conread position: 335-721
Cow position:
Alignm length: 411
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 80

Conread position: 337-708
Cow position:
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 9

Conread position: 338-460
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 71

Conread position: 361-785
Cow position:
Alignm length: 461
Alignm identity: 314
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 78, 51

Conread position: 379-804
Cow position:
Alignm length: 439
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 135

Show alignments to all cow chromosomes.