Cow genome map
| Conread name: | Ss1.1-Thy1-THY010080G11.5 |
| Conread position: | 1-206 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 76 |
| Conread position: | 1-207 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 1-217 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 124, 62 |
| Conread position: | 1-227 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 74 |
| Conread position: | 1-243 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 123, 50 |
| Conread position: | 1-248 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 1-274 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 211, 65 |
| Conread position: | 1-278 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 127, 63 |
| Conread position: | 1-299 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 69, 160 |
| Conread position: | 1-320 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 1-333 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 1-333 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 55 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 124, 158 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 55 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 207, 25 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 2-175 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 125, 154 |
| Conread position: | 2-206 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 123, 97 |
| Conread position: | 2-224 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 2-331 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 2-332 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 124, 38 |
| Conread position: | 3-256 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 125, 28 |
| Conread position: | 3-266 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 3-337 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 126, 138 |
| Conread position: | 3-344 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 29, 76 |
| Conread position: | 3-367 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 163 |
| Conread position: | 4-267 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 101, 163 |
| Conread position: | 6-155 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 67, 58 |
| Conread position: | 6-306 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 6-335 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 154 |
| Conread position: | 6-337 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 120, 30 |
| Conread position: | 7-326 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 119, 78 |
| Conread position: | 8-357 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 10-265 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 11-333 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 114, 52 |
| Conread position: | 12-193 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 149 |
| Conread position: | 12-207 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 151 |
| Conread position: | 12-255 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 12-275 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 52 |
| Conread position: | 12-333 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 113, 63 |
| Conread position: | 12-333 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 113, 147 |
| Conread position: | 12-337 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 54 |
| Conread position: | 12-338 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 104 |
| Conread position: | 12-338 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 114, 67 |
| Conread position: | 12-369 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 225, 52 |
| Conread position: | 13-154 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 68 |
| Conread position: | 13-206 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 14-261 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 86, 147 |
| Conread position: | 15-206 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 111, 65 |
| Conread position: | 15-254 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 146 |
| Conread position: | 15-338 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 17-292 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 148 |
| Conread position: | 21-266 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 109, 59 |
| Conread position: | 21-328 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 60, 144 |
| Conread position: | 21-338 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 108, 43 |
| Conread position: | 23-262 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 130, 69 |
| Conread position: | 23-333 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 47, 137 |
| Conread position: | 24-278 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 24-323 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 49, 142 |
| Conread position: | 24-329 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 116, 62 |
| Conread position: | 24-333 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 102, 40 |
| Conread position: | 25-338 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 27-330 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 60, 133 |
| Conread position: | 32-337 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 176, 6 |
| Conread position: | 43-255 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 43-326 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 45-278 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 9 |
| Conread position: | 53-251 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 62-311 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 70-332 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 70-336 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 94 |
| Conread position: | 71-337 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 74-311 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 92 |
| Conread position: | 75-315 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 81-331 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 87-316 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 129, 44 |
| Conread position: | 109-333 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 51 |
| Conread position: | 114-331 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 131-337 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 335-695 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 147, 17 |
| Conread position: | 336-501 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 77 |
| Conread position: | 338-515 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 338-762 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 338-796 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 500-781 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 530-799 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 45 |
Show alignments to all cow chromosomes.