Cow genome map
| Conread name: | Ss1.1-Thy1-THY010080G11.5 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 151, 85 |
| Conread position: | 1-207 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 63 |
| Conread position: | 1-212 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 209, 63 |
| Conread position: | 1-248 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 1-250 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 160 |
| Conread position: | 1-269 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 8 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 1-281 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 69, 50 |
| Conread position: | 1-295 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 1-305 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 125, 74 |
| Conread position: | 1-330 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 122, 106 |
| Conread position: | 1-330 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 1-336 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 124, 66 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 63 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 1-339 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 1-344 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 122, 55 |
| Conread position: | 1-359 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 260 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 1-370 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 124, 64 |
| Conread position: | 2-258 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 12, 86 |
| Conread position: | 2-333 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 62 |
| Conread position: | 2-337 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 122, 79 |
| Conread position: | 3-328 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 123, 153 |
| Conread position: | 3-336 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 4-207 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 156 |
| Conread position: | 4-255 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 122, 35 |
| Conread position: | 4-333 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 62 |
| Conread position: | 6-183 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 78, 58 |
| Conread position: | 6-259 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 120, 61 |
| Conread position: | 6-266 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 58 |
| Conread position: | 11-268 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 148 |
| Conread position: | 11-338 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 12-155 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 69, 52 |
| Conread position: | 12-163 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 12-173 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 113, 67 |
| Conread position: | 12-193 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 116, 147 |
| Conread position: | 12-194 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 120, 147 |
| Conread position: | 12-206 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 53 |
| Conread position: | 12-207 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 12-251 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 116, 52 |
| Conread position: | 12-252 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 12-262 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 52 |
| Conread position: | 12-266 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 55 |
| Conread position: | 12-288 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 155 |
| Conread position: | 12-306 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 116, 147 |
| Conread position: | 12-306 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 57, 154 |
| Conread position: | 12-326 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 61, 46 |
| Conread position: | 12-327 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 12-331 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 12-337 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 55 |
| Conread position: | 12-337 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 68, 46 |
| Conread position: | 12-337 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 72, 150 |
| Conread position: | 12-357 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 114, 15 |
| Conread position: | 12-359 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 110, 52 |
| Conread position: | 13-147 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 13-337 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 5, 63 |
| Conread position: | 13-338 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 105, 67 |
| Conread position: | 15-336 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 126 |
| Conread position: | 17-334 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 108, 50 |
| Conread position: | 19-207 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 19-337 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 106, 63 |
| Conread position: | 20-205 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 87 |
| Conread position: | 21-192 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 21 |
| Conread position: | 21-265 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 44 |
| Conread position: | 21-275 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 54, 140 |
| Conread position: | 21-333 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 139 |
| Conread position: | 24-315 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 102, 43 |
| Conread position: | 27-296 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 6, 141 |
| Conread position: | 27-303 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 28-300 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 85 |
| Conread position: | 36-333 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 98 |
| Conread position: | 37-339 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 42-337 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 48-274 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 78, 111 |
| Conread position: | 48-315 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 49-297 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 79, 91 |
| Conread position: | 53-337 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 105 |
| Conread position: | 56-306 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 88 |
| Conread position: | 60-284 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 99 |
| Conread position: | 72-370 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 76-328 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 5, 26 |
| Conread position: | 80-323 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 28 |
| Conread position: | 80-333 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 128, 52 |
| Conread position: | 81-308 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 81-328 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 80 |
| Conread position: | 81-333 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 84-331 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 87-333 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 95-337 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 65 |
| Conread position: | 109-337 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 333-594 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 12, 8 |
| Conread position: | 338-804 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 346-798 |
| Cow position: | |
| Alignm length: | 468 |
| Alignm identity: | 313 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 21, 67 |
Show alignments to all cow chromosomes.