Cow genome map
Conread name: | Ss1.1-Thy1-THY010080G11.5 |
Conread position: | 1-182 |
Cow position: | chr18:12666777-12666957 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 131 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 82, 59 |
Conread position: | 1-198 |
Cow position: | chr18:23044122-23043923 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 139 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 78, 46 |
Conread position: | 1-206 |
Cow position: | chr18:254509-254303 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 151 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 80, 148 |
Conread position: | 1-250 |
Cow position: | chr18:51032067-51032318 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 173 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 54, 43 |
Conread position: | 1-266 |
Cow position: | chr18:43464119-43464389 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 184 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 53, 47 |
Conread position: | 1-274 |
Cow position: | chr18:35883773-35884044 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 188 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 127, 50 |
Conread position: | 1-282 |
Cow position: | chr18:46881727-46882007 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 204 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 15, 9 |
Conread position: | 1-288 |
Cow position: | chr18:28530803-28531096 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 212 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 29, 80 |
Conread position: | 1-297 |
Cow position: | chr18:17752807-17753124 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 221 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 125, 63 |
Conread position: | 1-306 |
Cow position: | chr18:23880015-23879707 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 228 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 10, 50 |
Conread position: | 1-306 |
Cow position: | chr18:35478471-35478167 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 212 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 125, 63 |
Conread position: | 1-327 |
Cow position: | chr18:51251319-51250987 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 222 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 127, 63 |
Conread position: | 1-331 |
Cow position: | chr18:19271144-19270812 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 233 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 128, 63 |
Conread position: | 1-331 |
Cow position: | chr18:25200409-25200082 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 223 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 127, 176 |
Conread position: | 1-331 |
Cow position: | chr18:51309549-51309214 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 57 |
Conread position: | 1-333 |
Cow position: | chr18:41958170-41957827 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 234 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 127, 35 |
Conread position: | 1-336 |
Cow position: | chr18:51331480-51331153 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 244 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 129, 63 |
Conread position: | 1-337 |
Cow position: | chr18:902674-902336 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 239 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 29, 21 |
Conread position: | 1-337 |
Cow position: | chr18:14816865-14816520 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 249 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 99, 76 |
Conread position: | 1-337 |
Cow position: | chr18:30846416-30846757 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 233 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 127, 85 |
Conread position: | 1-337 |
Cow position: | chr18:37874127-37874462 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 244 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 124, 28 |
Conread position: | 1-338 |
Cow position: | chr18:37678347-37678009 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 230 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 12, 8 |
Conread position: | 1-338 |
Cow position: | chr18:40342196-40342541 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 226 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 85, 65 |
Conread position: | 1-343 |
Cow position: | chr18:7445181-7444820 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 246 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 63, 164 |
Conread position: | 1-355 |
Cow position: | chr18:39412460-39412112 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 239 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 39, 52 |
Conread position: | 1-369 |
Cow position: | chr18:19401567-19401936 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 251 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 124, 63 |
Conread position: | 2-299 |
Cow position: | chr18:17355016-17354713 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 217 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 49, 66 |
Conread position: | 3-228 |
Cow position: | chr18:41498507-41498289 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 161 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 125, 64 |
Conread position: | 3-251 |
Cow position: | chr18:26305922-26305668 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 170 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 83, 157 |
Conread position: | 3-306 |
Cow position: | chr18:37862143-37862462 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 225 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 79, 16 |
Conread position: | 3-333 |
Cow position: | chr18:12249325-12248996 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 229 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 122, 61 |
Conread position: | 3-333 |
Cow position: | chr18:21797738-21797403 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 231 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 15, 62 |
Conread position: | 3-337 |
Cow position: | chr18:40078527-40078862 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 237 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 70, 52 |
Conread position: | 4-306 |
Cow position: | chr18:6377190-6376876 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 215 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 69, 6 |
Conread position: | 6-331 |
Cow position: | chr18:15485561-15485887 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 215 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 119, 69 |
Conread position: | 11-255 |
Cow position: | chr18:19683495-19683741 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 184 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 114, 101 |
Conread position: | 11-330 |
Cow position: | chr18:48798350-48798013 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 234 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 98, 106 |
Conread position: | 12-205 |
Cow position: | chr18:41156841-41156653 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 137 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 113, 147 |
Conread position: | 12-250 |
Cow position: | chr18:17335101-17335343 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 166 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 113, 147 |
Conread position: | 12-251 |
Cow position: | chr18:21236783-21237026 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 166 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 31, 53 |
Conread position: | 12-255 |
Cow position: | chr18:51580145-51580391 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 167 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 74, 52 |
Conread position: | 12-334 |
Cow position: | chr18:17454382-17454703 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 225 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 25, 69 |
Conread position: | 12-337 |
Cow position: | chr18:13025493-13025166 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 228 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 61, 51 |
Conread position: | 12-337 |
Cow position: | chr18:29797444-29797778 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 221 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 48, 148 |
Conread position: | 12-348 |
Cow position: | chr18:21455721-21455376 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 239 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 77, 24 |
Conread position: | 13-207 |
Cow position: | chr18:4369708-4369903 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 138 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 72, 51 |
Conread position: | 13-251 |
Cow position: | chr18:32117348-32117113 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 175 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 112, 51 |
Conread position: | 13-329 |
Cow position: | chr18:54629517-54629841 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 223 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 71, 55 |
Conread position: | 14-331 |
Cow position: | chr18:24502378-24502067 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 208 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 23, 66 |
Conread position: | 14-333 |
Cow position: | chr18:1658934-1659254 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 234 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 113, 61 |
Conread position: | 14-336 |
Cow position: | chr18:24712344-24712675 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 238 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 23, 49 |
Conread position: | 15-333 |
Cow position: | chr18:35852951-35853275 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 215 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 113, 29 |
Conread position: | 15-337 |
Cow position: | chr18:17735788-17736126 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 232 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 63, 84 |
Conread position: | 17-328 |
Cow position: | chr18:12275736-12275425 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 213 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 94, 8 |
Conread position: | 19-207 |
Cow position: | chr18:17324008-17323819 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 131 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 106, 140 |
Conread position: | 20-243 |
Cow position: | chr18:10802260-10802475 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 159 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 5, 47 |
Conread position: | 21-278 |
Cow position: | chr18:51234442-51234711 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 183 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 43, 155 |
Conread position: | 21-333 |
Cow position: | chr18:17670341-17670659 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 216 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 107, 23 |
Conread position: | 21-336 |
Cow position: | chr18:36208758-36209065 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 217 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 104, 51 |
Conread position: | 23-267 |
Cow position: | chr18:43129706-43129471 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 179 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 103, 15 |
Conread position: | 24-337 |
Cow position: | chr18:5977575-5977879 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 211 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 236, 39 |
Conread position: | 26-328 |
Cow position: | chr18:14406592-14406904 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 213 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 99, 54 |
Conread position: | 26-333 |
Cow position: | chr18:12997192-12996879 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 204 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 100, 129 |
Conread position: | 27-206 |
Cow position: | chr18:32323555-32323373 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 132 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 87, 17 |
Conread position: | 27-327 |
Cow position: | chr18:48300841-48301149 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 24 |
Conread position: | 27-337 |
Cow position: | chr18:183402-183091 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 213 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 58, 48 |
Conread position: | 48-333 |
Cow position: | chr18:34574923-34575207 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 191 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 43, 61 |
Conread position: | 49-268 |
Cow position: | chr18:28679304-28679083 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 159 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 72, 15 |
Conread position: | 50-338 |
Cow position: | chr18:9104841-9105146 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 208 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 35, 20 |
Conread position: | 61-338 |
Cow position: | chr18:28084638-28084354 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 190 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 63, 98 |
Conread position: | 64-338 |
Cow position: | chr18:37561568-37561298 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 202 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 62, 5 |
Conread position: | 65-327 |
Cow position: | chr18:17995537-17995808 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 183 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 65-329 |
Cow position: | chr18:15859959-15859701 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 185 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 60, 13 |
Conread position: | 82-337 |
Cow position: | chr18:18854995-18854733 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 186 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 44, 69 |
Conread position: | 82-337 |
Cow position: | chr18:36606143-36605890 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 192 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 18, 84 |
Conread position: | 87-337 |
Cow position: | chr18:44404399-44404137 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 190 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 39, 102 |
Conread position: | 88-337 |
Cow position: | chr18:39812076-39812330 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 195 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 7, 82 |
Conread position: | 131-337 |
Cow position: | chr18:14761670-14761465 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 154 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 116, 27 |
Conread position: | 140-345 |
Cow position: | chr18:30110906-30111112 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 153 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 67, 25 |
Conread position: | 339-790 |
Cow position: | chr18:9186595-9186160 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 34 |
Conread position: | 341-694 |
Cow position: | chr18:46877831-46877462 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 254 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 103, 5 |
Conread position: | 389-799 |
Cow position: | chr18:4885352-4884942 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 300 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 50, 23 |
Show alignments to all cow chromosomes.