Cow genome map
| Conread name: | Ss1.1-Thy1-THY010080G11.5 |
| Conread position: | 1-182 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 1-198 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 1-206 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 80, 148 |
| Conread position: | 1-250 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 1-266 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 1-274 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 127, 50 |
| Conread position: | 1-282 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 1-297 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 125, 63 |
| Conread position: | 1-306 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 1-306 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 125, 63 |
| Conread position: | 1-327 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 127, 63 |
| Conread position: | 1-331 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 128, 63 |
| Conread position: | 1-331 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 127, 176 |
| Conread position: | 1-331 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 57 |
| Conread position: | 1-333 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 127, 35 |
| Conread position: | 1-336 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 99, 76 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 127, 85 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 124, 28 |
| Conread position: | 1-338 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 8 |
| Conread position: | 1-338 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 65 |
| Conread position: | 1-343 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 63, 164 |
| Conread position: | 1-355 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 1-369 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 2-299 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 3-228 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 125, 64 |
| Conread position: | 3-251 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 83, 157 |
| Conread position: | 3-306 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 79, 16 |
| Conread position: | 3-333 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 122, 61 |
| Conread position: | 3-333 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 3-337 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 70, 52 |
| Conread position: | 4-306 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 69, 6 |
| Conread position: | 6-331 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 119, 69 |
| Conread position: | 11-255 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 114, 101 |
| Conread position: | 11-330 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 106 |
| Conread position: | 12-205 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 113, 147 |
| Conread position: | 12-250 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 113, 147 |
| Conread position: | 12-251 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 12-255 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 74, 52 |
| Conread position: | 12-334 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 12-337 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 12-337 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 48, 148 |
| Conread position: | 12-348 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 77, 24 |
| Conread position: | 13-207 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 13-251 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 112, 51 |
| Conread position: | 13-329 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 55 |
| Conread position: | 14-331 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 14-333 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 113, 61 |
| Conread position: | 14-336 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 15-333 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 113, 29 |
| Conread position: | 15-337 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 17-328 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 94, 8 |
| Conread position: | 19-207 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 140 |
| Conread position: | 20-243 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 47 |
| Conread position: | 21-278 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 155 |
| Conread position: | 21-333 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 107, 23 |
| Conread position: | 21-336 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 104, 51 |
| Conread position: | 23-267 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 103, 15 |
| Conread position: | 24-337 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 236, 39 |
| Conread position: | 26-328 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 99, 54 |
| Conread position: | 26-333 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 100, 129 |
| Conread position: | 27-206 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 27-327 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 24 |
| Conread position: | 27-337 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 48-333 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 49-268 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 15 |
| Conread position: | 50-338 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 61-338 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 98 |
| Conread position: | 64-338 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 62, 5 |
| Conread position: | 65-327 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 65-329 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 82-337 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 44, 69 |
| Conread position: | 82-337 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 87-337 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 102 |
| Conread position: | 88-337 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 7, 82 |
| Conread position: | 131-337 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 116, 27 |
| Conread position: | 140-345 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 339-790 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 34 |
| Conread position: | 341-694 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 103, 5 |
| Conread position: | 389-799 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 23 |
Show alignments to all cow chromosomes.