Cow genome map
| Conread name: | Ss1.1-Thy1-THY010080G11.5 |
| Conread position: | 1-207 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 1-207 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 124, 24 |
| Conread position: | 1-222 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 80, 68 |
| Conread position: | 1-225 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 171 |
| Conread position: | 1-246 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 124, 99 |
| Conread position: | 1-251 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 127, 49 |
| Conread position: | 1-267 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 66 |
| Conread position: | 1-329 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 1-331 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 156 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 123, 9 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 1-338 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 10 |
| Conread position: | 2-250 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 139, 73 |
| Conread position: | 2-327 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 2-333 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 2-333 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 2-336 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 123, 70 |
| Conread position: | 3-189 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 82, 160 |
| Conread position: | 3-251 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 123, 62 |
| Conread position: | 3-255 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 83, 175 |
| Conread position: | 3-255 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 157 |
| Conread position: | 3-264 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 108, 7 |
| Conread position: | 3-316 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 35 |
| Conread position: | 3-326 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 3-335 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 90 |
| Conread position: | 3-337 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 129, 14 |
| Conread position: | 4-333 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 121, 34 |
| Conread position: | 4-338 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 60 |
| Conread position: | 6-333 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 35, 67 |
| Conread position: | 7-333 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 120 |
| Conread position: | 11-296 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 16 |
| Conread position: | 11-332 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 12-201 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 12-205 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 113, 54 |
| Conread position: | 12-250 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 114, 33 |
| Conread position: | 12-273 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 12-321 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 12-323 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 10, 93 |
| Conread position: | 12-329 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 107 |
| Conread position: | 12-333 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 12-336 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 149, 132 |
| Conread position: | 12-338 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 111, 55 |
| Conread position: | 13-322 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 112, 54 |
| Conread position: | 13-336 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 68 |
| Conread position: | 13-337 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 112, 51 |
| Conread position: | 14-188 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 14-225 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 111, 49 |
| Conread position: | 14-337 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 154 |
| Conread position: | 14-344 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 142, 67 |
| Conread position: | 15-187 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 52 |
| Conread position: | 15-256 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 117, 108 |
| Conread position: | 15-331 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 17-250 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 183, 62 |
| Conread position: | 21-292 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 145 |
| Conread position: | 21-336 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 189, 94 |
| Conread position: | 22-238 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 104, 45 |
| Conread position: | 23-155 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 62, 46 |
| Conread position: | 23-207 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 23-317 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 102, 41 |
| Conread position: | 23-333 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 102, 133 |
| Conread position: | 24-331 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 173, 74 |
| Conread position: | 26-346 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 56, 135 |
| Conread position: | 30-337 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 47-331 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 33 |
| Conread position: | 47-337 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 48-332 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 32 |
| Conread position: | 50-263 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 75, 109 |
| Conread position: | 51-313 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 90 |
| Conread position: | 51-323 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 57-338 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 7 |
| Conread position: | 71-336 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 56, 86 |
| Conread position: | 72-337 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 87 |
| Conread position: | 76-330 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 80-333 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 48, 21 |
| Conread position: | 82-338 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 74 |
| Conread position: | 82-338 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 83-337 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 85-311 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 90-333 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 101-337 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 113-334 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 99, 22 |
| Conread position: | 122-337 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 44 |
| Conread position: | 158-327 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 206-370 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 338-800 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 544-804 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 10, 54 |
| Conread position: | 545-798 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 35, 20 |
Show alignments to all cow chromosomes.