Cow genome map
Conread name: | Ss1.1-Thy1-THY010080G11.5 |
Conread position: | 1-155 |
Cow position: | chr29:18528373-18528526 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 116 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 71, 63 |
Conread position: | 1-251 |
Cow position: | chr29:4480826-4481076 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 169 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 124, 63 |
Conread position: | 1-286 |
Cow position: | chr29:30517508-30517799 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 202 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 124, 57 |
Conread position: | 1-289 |
Cow position: | chr29:20642047-20641760 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 202 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 126, 40 |
Conread position: | 1-328 |
Cow position: | chr29:39553231-39553567 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 241 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 34, 69 |
Conread position: | 1-331 |
Cow position: | chr29:22634460-22634123 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 222 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 82, 11 |
Conread position: | 1-332 |
Cow position: | chr29:1004437-1004106 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 223 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 82, 50 |
Conread position: | 1-333 |
Cow position: | chr29:11786572-11786231 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 224 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 84, 71 |
Conread position: | 1-333 |
Cow position: | chr29:30432627-30432964 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 212 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 142, 158 |
Conread position: | 1-336 |
Cow position: | chr29:22269146-22268818 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 247 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 127, 62 |
Conread position: | 1-337 |
Cow position: | chr29:18399821-18399493 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 227 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 194, 66 |
Conread position: | 1-337 |
Cow position: | chr29:19565334-19565674 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 239 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 32, 178 |
Conread position: | 1-337 |
Cow position: | chr29:34120947-34121283 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 64 |
Conread position: | 1-338 |
Cow position: | chr29:36409636-36409318 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 238 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-340 |
Cow position: | chr29:30357723-30358065 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 225 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 128, 57 |
Conread position: | 1-355 |
Cow position: | chr29:4490061-4489709 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 245 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 108, 35 |
Conread position: | 2-219 |
Cow position: | chr29:34390565-34390777 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 160 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 123, 30 |
Conread position: | 2-331 |
Cow position: | chr29:20466918-20466604 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 227 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 242, 68 |
Conread position: | 2-337 |
Cow position: | chr29:6199717-6200039 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 232 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 125, 24 |
Conread position: | 3-210 |
Cow position: | chr29:23385197-23384996 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 152 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 99, 43 |
Conread position: | 3-249 |
Cow position: | chr29:32807925-32807677 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 173 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 83, 61 |
Conread position: | 3-255 |
Cow position: | chr29:32942211-32941956 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 174 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 98, 44 |
Conread position: | 3-306 |
Cow position: | chr29:34332850-34333156 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 209 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 161, 29 |
Conread position: | 3-326 |
Cow position: | chr29:33009113-33008793 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 213 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 67, 157 |
Conread position: | 3-326 |
Cow position: | chr29:45523077-45523406 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 233 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 77, 49 |
Conread position: | 3-336 |
Cow position: | chr29:31748239-31748578 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 229 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 81, 159 |
Conread position: | 3-338 |
Cow position: | chr29:7330890-7331237 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 244 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 122, 155 |
Conread position: | 5-206 |
Cow position: | chr29:26216493-26216303 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 142 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 12-251 |
Cow position: | chr29:22285625-22285391 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 178 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 114, 55 |
Conread position: | 12-327 |
Cow position: | chr29:36614787-36615105 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 238 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 114, 52 |
Conread position: | 12-328 |
Cow position: | chr29:5635878-5635571 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 230 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 114, 31 |
Conread position: | 12-328 |
Cow position: | chr29:40610066-40610377 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 216 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 113, 55 |
Conread position: | 12-333 |
Cow position: | chr29:33559459-33559793 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 227 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 129, 110 |
Conread position: | 12-335 |
Cow position: | chr29:36323582-36323251 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 66 |
Conread position: | 12-337 |
Cow position: | chr29:137917-137582 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 219 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 110, 148 |
Conread position: | 13-286 |
Cow position: | chr29:22949351-22949626 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 191 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 47, 55 |
Conread position: | 13-306 |
Cow position: | chr29:43405018-43405303 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 195 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 113, 67 |
Conread position: | 14-260 |
Cow position: | chr29:20615241-20614994 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 177 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 72, 44 |
Conread position: | 14-298 |
Cow position: | chr29:35261422-35261148 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 198 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 111, 45 |
Conread position: | 15-207 |
Cow position: | chr29:41183627-41183820 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 134 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 110, 144 |
Conread position: | 15-250 |
Cow position: | chr29:799115-799348 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 171 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 110, 23 |
Conread position: | 15-291 |
Cow position: | chr29:19761612-19761330 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 190 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 110, 143 |
Conread position: | 15-346 |
Cow position: | chr29:3106842-3106522 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 220 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 113, 50 |
Conread position: | 21-192 |
Cow position: | chr29:22935595-22935423 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 122 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 104, 138 |
Conread position: | 21-233 |
Cow position: | chr29:38247438-38247652 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 155 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 58, 89 |
Conread position: | 21-261 |
Cow position: | chr29:37451628-37451378 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 170 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 71, 34 |
Conread position: | 21-331 |
Cow position: | chr29:43626079-43626382 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 209 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 106, 57 |
Conread position: | 21-337 |
Cow position: | chr29:23907564-23907257 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 216 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 52, 113 |
Conread position: | 22-274 |
Cow position: | chr29:8512023-8511777 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 175 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 57, 89 |
Conread position: | 22-328 |
Cow position: | chr29:40463437-40463135 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 213 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 103, 42 |
Conread position: | 24-317 |
Cow position: | chr29:38485312-38485021 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 208 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 101, 23 |
Conread position: | 24-337 |
Cow position: | chr29:4082957-4083281 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 220 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 100, 148 |
Conread position: | 24-338 |
Cow position: | chr29:39326200-39325896 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 216 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 5, 42 |
Conread position: | 26-338 |
Cow position: | chr29:36405362-36405054 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 214 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 102, 23 |
Conread position: | 37-207 |
Cow position: | chr29:13077236-13077058 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 131 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 29, 129 |
Conread position: | 43-295 |
Cow position: | chr29:7748184-7748430 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 180 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 27, 21 |
Conread position: | 69-327 |
Cow position: | chr29:6536885-6536624 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 182 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 16, 74 |
Conread position: | 76-337 |
Cow position: | chr29:5799603-5799341 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 184 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 13, 51 |
Conread position: | 76-338 |
Cow position: | chr29:17342301-17342567 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 183 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 48, 84 |
Conread position: | 80-337 |
Cow position: | chr29:9512441-9512700 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 182 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 48, 102 |
Conread position: | 83-333 |
Cow position: | chr29:30106360-30106617 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 183 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 43, 15 |
Conread position: | 110-334 |
Cow position: | chr29:39371836-39371614 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 155 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 15, 58 |
Conread position: | 124-337 |
Cow position: | chr29:36594433-36594642 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 152 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 9, 43 |
Conread position: | 341-799 |
Cow position: | chr29:16017056-16016592 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 56 |
Show alignments to all cow chromosomes.