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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010080G11.5
        

               
Conread position:
               
1-147
               

               
Cow position:
               
chr3:68503011-68503159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr3:68504524-68504672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr3:61466295-61466498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 161
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr3:40978922-40978717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr3:26567256-26567050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
115, 80
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr3:15184611-15184407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr3:53158845-53158604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr3:33254381-33254637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr3:49388131-49387873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
78, 119
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr3:64654149-64653893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr3:23944440-23944181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 60
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr3:17056585-17056853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 158
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr3:51458376-51458106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr3:16868925-16869219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr3:72006580-72006896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
38, 161
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr3:9591571-9591880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
125, 165
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr3:22948317-22948618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr3:70249929-70250234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
209, 63
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr3:43419124-43418800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 78
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr3:9422014-9422343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
209, 125
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr3:25997622-25997951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr3:77548283-77547962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr3:322384-322725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
129, 30
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr3:26787481-26787159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
127, 92
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr3:56101732-56101396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
105, 78
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr3:72376706-72376382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr3:7739943-7740292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr3:29802291-29801946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr3:41582872-41582532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr3:63138790-63139128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
113, 63
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr3:68401974-68402305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr3:76709656-76709312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 78
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr3:16716356-16716692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 79
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr3:55190393-55190714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 62
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr3:65581711-65582059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
78, 167
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr3:55129832-55129485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 63
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr3:27090716-27091072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
124, 66
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr3:80582332-80582157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
2-206
               

               
Cow position:
               
chr3:58025557-58025758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr3:20141402-20141161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr3:27299066-27299303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 62
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr3:9290083-9289789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr3:58064672-58065003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr3:45863455-45863784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
2-333
               

               
Cow position:
               
chr3:74403406-74403067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr3:47697279-47696945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
119, 63
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr3:63273629-63273276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr3:57531614-57531266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr3:51539794-51539419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
123, 166
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr3:43232543-43232345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr3:52149805-52150061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr3:16897030-16897294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 61
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr3:16789325-16789053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr3:40069862-40070199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 164
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr3:11278882-11278558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr3:8563598-8563925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr3:24909265-24908917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
122, 53
               

               
Conread position:
               
4-156
               

               
Cow position:
               
chr3:61611205-61611361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 147
               

               
Conread position:
               
6-205
               

               
Cow position:
               
chr3:63198789-63198592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr3:18253019-18252812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr3:73305650-73305324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr3:4691284-4690947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
7-338
               

               
Cow position:
               
chr3:19109038-19108695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 154
               

               
Conread position:
               
10-333
               

               
Cow position:
               
chr3:53924203-53924533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
11-183
               

               
Cow position:
               
chr3:7948619-7948784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
11-337
               

               
Cow position:
               
chr3:42982788-42983110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
113, 61
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr3:6689300-6689103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr3:73811555-73811349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
56, 153
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr3:21100274-21100042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr3:83699437-83699666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
113, 55
               

               
Conread position:
               
12-251
               

               
Cow position:
               
chr3:49541737-49541982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
12-255
               

               
Cow position:
               
chr3:52651484-52651731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
12-257
               

               
Cow position:
               
chr3:83912032-83911788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
12-272
               

               
Cow position:
               
chr3:62754873-62754609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
200, 114
               

               
Conread position:
               
12-273
               

               
Cow position:
               
chr3:76926880-76926636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
114, 63
               

               
Conread position:
               
12-292
               

               
Cow position:
               
chr3:38003695-38003409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
12-301
               

               
Cow position:
               
chr3:47691441-47691150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 52
               

               
Conread position:
               
12-327
               

               
Cow position:
               
chr3:56153756-56153444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
112, 39
               

               
Conread position:
               
12-328
               

               
Cow position:
               
chr3:36121646-36121322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
12-329
               

               
Cow position:
               
chr3:42993408-42993731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
114, 52
               

               
Conread position:
               
12-331
               

               
Cow position:
               
chr3:22512772-22512456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
12-331
               

               
Cow position:
               
chr3:47209619-47209949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
12-332
               

               
Cow position:
               
chr3:20578364-20578692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
117, 55
               

               
Conread position:
               
12-333
               

               
Cow position:
               
chr3:11659924-11659594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
12-333
               

               
Cow position:
               
chr3:15988408-15988081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
12-333
               

               
Cow position:
               
chr3:37982895-37983224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
12-337
               

               
Cow position:
               
chr3:7476449-7476782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
12-337
               

               
Cow position:
               
chr3:16883854-16884166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
112, 52
               

               
Conread position:
               
12-337
               

               
Cow position:
               
chr3:21178786-21179121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
12-337
               

               
Cow position:
               
chr3:22044701-22045023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
12-337
               

               
Cow position:
               
chr3:70519829-70520149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
114, 82
               

               
Conread position:
               
12-337
               

               
Cow position:
               
chr3:72863578-72863907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
111, 253
               

               
Conread position:
               
12-337
               

               
Cow position:
               
chr3:75038371-75038704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
113, 141
               

               
Conread position:
               
12-338
               

               
Cow position:
               
chr3:65961350-65961025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
112, 33
               

               
Conread position:
               
12-340
               

               
Cow position:
               
chr3:3845508-3845830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
114, 83
               

               
Conread position:
               
12-345
               

               
Cow position:
               
chr3:33469195-33469528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
112, 147
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr3:44365487-44365154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
13-306
               

               
Cow position:
               
chr3:6828655-6828361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
13-336
               

               
Cow position:
               
chr3:38255105-38254784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
14-331
               

               
Cow position:
               
chr3:51314546-51314221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 50
               

               
Conread position:
               
14-333
               

               
Cow position:
               
chr3:26660502-26660818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
112, 50
               

               
Conread position:
               
14-337
               

               
Cow position:
               
chr3:21061266-21061598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 142
               

               
Conread position:
               
15-331
               

               
Cow position:
               
chr3:57968605-57968289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
17-268
               

               
Cow position:
               
chr3:56494213-56494463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
17-300
               

               
Cow position:
               
chr3:60279124-60279409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
106, 47
               

               
Conread position:
               
21-206
               

               
Cow position:
               
chr3:82513481-82513298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
104, 43
               

               
Conread position:
               
21-294
               

               
Cow position:
               
chr3:54863161-54863440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
21-328
               

               
Cow position:
               
chr3:52513920-52513616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr3:15570891-15570580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
92, 138
               

               
Conread position:
               
21-331
               

               
Cow position:
               
chr3:39214838-39214516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
84, 142
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr3:40101398-40101713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr3:15998748-15998432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
21-338
               

               
Cow position:
               
chr3:12254500-12254182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
21-358
               

               
Cow position:
               
chr3:43671159-43671492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
22-333
               

               
Cow position:
               
chr3:49336652-49336337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
22-338
               

               
Cow position:
               
chr3:69299515-69299206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
22-359
               

               
Cow position:
               
chr3:49297199-49296863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
23-333
               

               
Cow position:
               
chr3:31933878-31934197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 136
               

               
Conread position:
               
24-267
               

               
Cow position:
               
chr3:56103198-56102953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 136
               

               
Conread position:
               
24-272
               

               
Cow position:
               
chr3:15747116-15747366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
24-328
               

               
Cow position:
               
chr3:5420582-5420899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 145
               

               
Conread position:
               
24-333
               

               
Cow position:
               
chr3:57590788-57590489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
24-338
               

               
Cow position:
               
chr3:16114864-16114543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
25-300
               

               
Cow position:
               
chr3:57977095-57977377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
26-345
               

               
Cow position:
               
chr3:43662701-43662381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 73
               

               
Conread position:
               
27-251
               

               
Cow position:
               
chr3:8451462-8451684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
27-332
               

               
Cow position:
               
chr3:43316790-43317107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
27-333
               

               
Cow position:
               
chr3:27515711-27515420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
179, 10
               

               
Conread position:
               
27-338
               

               
Cow position:
               
chr3:10625000-10625306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
32-207
               

               
Cow position:
               
chr3:76354902-76354726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 127
               

               
Conread position:
               
35-331
               

               
Cow position:
               
chr3:23012652-23012349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
35-331
               

               
Cow position:
               
chr3:27223483-27223182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 130
               

               
Conread position:
               
35-337
               

               
Cow position:
               
chr3:56699205-56699509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 122
               

               
Conread position:
               
36-333
               

               
Cow position:
               
chr3:24276018-24275711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
89, 123
               

               
Conread position:
               
37-333
               

               
Cow position:
               
chr3:71143659-71143957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
177, 26
               

               
Conread position:
               
37-337
               

               
Cow position:
               
chr3:64426853-64427162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 132
               

               
Conread position:
               
38-337
               

               
Cow position:
               
chr3:27454494-27454795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
40-331
               

               
Cow position:
               
chr3:21025968-21026264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 119
               

               
Conread position:
               
47-304
               

               
Cow position:
               
chr3:76610207-76609950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
159, 29
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr3:77623507-77623319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
48-273
               

               
Cow position:
               
chr3:4780039-4779815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
81, 67
               

               
Conread position:
               
50-231
               

               
Cow position:
               
chr3:14748399-14748584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
51-255
               

               
Cow position:
               
chr3:61554345-61554545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
53-337
               

               
Cow position:
               
chr3:22867539-22867830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
54-344
               

               
Cow position:
               
chr3:15725205-15724913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
58-337
               

               
Cow position:
               
chr3:27674296-27674579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
59-333
               

               
Cow position:
               
chr3:75164654-75164926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
61-206
               

               
Cow position:
               
chr3:14546585-14546436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
65-331
               

               
Cow position:
               
chr3:45615745-45615477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
67-357
               

               
Cow position:
               
chr3:66281647-66281934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
72-207
               

               
Cow position:
               
chr3:18996628-18996492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
53, 95
               

               
Conread position:
               
77-338
               

               
Cow position:
               
chr3:35509252-35508990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
81-328
               

               
Cow position:
               
chr3:26532604-26532860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
81-335
               

               
Cow position:
               
chr3:10038605-10038334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 252
               

               
Conread position:
               
81-336
               

               
Cow position:
               
chr3:31321723-31321472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
81-337
               

               
Cow position:
               
chr3:50532771-50533021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
82-335
               

               
Cow position:
               
chr3:55895352-55895095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
82-338
               

               
Cow position:
               
chr3:41654940-41654678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
125, 243
               

               
Conread position:
               
105-333
               

               
Cow position:
               
chr3:29428853-29429070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
107-337
               

               
Cow position:
               
chr3:39233965-39233725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
125-332
               

               
Cow position:
               
chr3:74132598-74132811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
128-333
               

               
Cow position:
               
chr3:73638624-73638413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
131-338
               

               
Cow position:
               
chr3:56963089-56963301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
134-336
               

               
Cow position:
               
chr3:66043355-66043566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
155-334
               

               
Cow position:
               
chr3:80580360-80580183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
335-551
               

               
Cow position:
               
chr3:18729137-18728911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
336-721
               

               
Cow position:
               
chr3:49601931-49601556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 19
               

               
Conread position:
               
338-721
               

               
Cow position:
               
chr3:21305174-21304790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
345-799
               

               
Cow position:
               
chr3:64821623-64822056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
357-796
               

               
Cow position:
               
chr3:12680395-12679955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
554-785
               

               
Cow position:
               
chr3:37624529-37624747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
140, 29
               

               
Conread position:
               
610-799
               

               
Cow position:
               
chr3:31415423-31415614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               
Show alignments to all cow chromosomes.