Cow genome map

Conread name: Ss1.1-Thy1-THY010080G11.5

Conread position: 1-176
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 1-181
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 160

Conread position: 1-192
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 44

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 78

Conread position: 1-207
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 63

Conread position: 1-218
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 47

Conread position: 1-222
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 111

Conread position: 1-239
Cow position:
Alignm length: 240
Alignm identity: 162
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 228, 72

Conread position: 1-247
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 211, 137

Conread position: 1-249
Cow position:
Alignm length: 258
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 125, 46

Conread position: 1-249
Cow position:
Alignm length: 259
Alignm identity: 175
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 88, 171

Conread position: 1-250
Cow position:
Alignm length: 252
Alignm identity: 170
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 124, 80

Conread position: 1-254
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 172

Conread position: 1-270
Cow position:
Alignm length: 278
Alignm identity: 191
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 66

Conread position: 1-272
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 127, 94

Conread position: 1-305
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 12, 112

Conread position: 1-326
Cow position:
Alignm length: 340
Alignm identity: 219
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 100, 161

Conread position: 1-326
Cow position:
Alignm length: 334
Alignm identity: 209
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 65

Conread position: 1-332
Cow position:
Alignm length: 345
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 124, 79

Conread position: 1-333
Cow position:
Alignm length: 342
Alignm identity: 213
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 158

Conread position: 1-333
Cow position:
Alignm length: 340
Alignm identity: 217
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 159

Conread position: 1-333
Cow position:
Alignm length: 339
Alignm identity: 215
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 208, 156

Conread position: 1-333
Cow position:
Alignm length: 339
Alignm identity: 219
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 26

Conread position: 1-336
Cow position:
Alignm length: 343
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 8

Conread position: 1-337
Cow position:
Alignm length: 348
Alignm identity: 248
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 9

Conread position: 1-337
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 69, 166

Conread position: 1-337
Cow position:
Alignm length: 346
Alignm identity: 220
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 63

Conread position: 1-337
Cow position:
Alignm length: 340
Alignm identity: 231
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 206, 41

Conread position: 1-338
Cow position:
Alignm length: 345
Alignm identity: 226
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 124, 63

Conread position: 2-251
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 159

Conread position: 2-268
Cow position:
Alignm length: 275
Alignm identity: 183
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 127, 62

Conread position: 2-285
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 124, 73

Conread position: 2-336
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 118, 56

Conread position: 2-338
Cow position:
Alignm length: 347
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 168

Conread position: 3-254
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 204, 109

Conread position: 3-255
Cow position:
Alignm length: 259
Alignm identity: 173
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 64

Conread position: 3-319
Cow position:
Alignm length: 323
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 204, 40

Conread position: 3-333
Cow position:
Alignm length: 336
Alignm identity: 186
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 61

Conread position: 3-337
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 19, 73

Conread position: 3-338
Cow position:
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 98

Conread position: 4-201
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 49

Conread position: 4-255
Cow position:
Alignm length: 263
Alignm identity: 179
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 44

Conread position: 4-332
Cow position:
Alignm length: 334
Alignm identity: 220
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 182, 60

Conread position: 4-333
Cow position:
Alignm length: 344
Alignm identity: 229
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 9, 157

Conread position: 5-207
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 59

Conread position: 5-313
Cow position:
Alignm length: 326
Alignm identity: 220
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 31

Conread position: 5-336
Cow position:
Alignm length: 339
Alignm identity: 221
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 70, 90

Conread position: 6-292
Cow position:
Alignm length: 294
Alignm identity: 195
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 19

Conread position: 6-332
Cow position:
Alignm length: 336
Alignm identity: 222
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 82, 100

Conread position: 6-338
Cow position:
Alignm length: 335
Alignm identity: 225
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 119, 128

Conread position: 11-337
Cow position:
Alignm length: 341
Alignm identity: 226
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 99, 12

Conread position: 11-337
Cow position:
Alignm length: 337
Alignm identity: 222
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 115, 15

Conread position: 12-237
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 52

Conread position: 12-254
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 113, 31

Conread position: 12-254
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 12-279
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 55

Conread position: 12-306
Cow position:
Alignm length: 300
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 32

Conread position: 12-315
Cow position:
Alignm length: 312
Alignm identity: 209
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 69, 42

Conread position: 12-329
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 200, 58

Conread position: 12-333
Cow position:
Alignm length: 331
Alignm identity: 219
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 36

Conread position: 12-333
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 129

Conread position: 12-337
Cow position:
Alignm length: 341
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 155

Conread position: 12-340
Cow position:
Alignm length: 338
Alignm identity: 218
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 55

Conread position: 13-333
Cow position:
Alignm length: 334
Alignm identity: 220
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 72, 88

Conread position: 13-338
Cow position:
Alignm length: 338
Alignm identity: 239
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 115, 34

Conread position: 14-251
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 192, 45

Conread position: 14-338
Cow position:
Alignm length: 336
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 59

Conread position: 15-251
Cow position:
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 103

Conread position: 15-276
Cow position:
Alignm length: 266
Alignm identity: 175
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 230, 51

Conread position: 15-289
Cow position:
Alignm length: 287
Alignm identity: 203
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 113, 85

Conread position: 15-306
Cow position:
Alignm length: 308
Alignm identity: 203
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 84

Conread position: 15-364
Cow position:
Alignm length: 360
Alignm identity: 227
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 49

Conread position: 17-307
Cow position:
Alignm length: 301
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 123

Conread position: 20-333
Cow position:
Alignm length: 323
Alignm identity: 226
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 138

Conread position: 21-243
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 46

Conread position: 21-338
Cow position:
Alignm length: 327
Alignm identity: 220
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 90, 27

Conread position: 21-369
Cow position:
Alignm length: 370
Alignm identity: 246
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 152

Conread position: 23-255
Cow position:
Alignm length: 235
Alignm identity: 157
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 101, 41

Conread position: 24-249
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 62, 139

Conread position: 24-265
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 138

Conread position: 24-337
Cow position:
Alignm length: 320
Alignm identity: 211
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 43

Conread position: 26-337
Cow position:
Alignm length: 321
Alignm identity: 220
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 100, 54

Conread position: 26-347
Cow position:
Alignm length: 328
Alignm identity: 215
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 38

Conread position: 27-335
Cow position:
Alignm length: 317
Alignm identity: 209
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 101, 40

Conread position: 28-205
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 38

Conread position: 30-332
Cow position:
Alignm length: 309
Alignm identity: 205
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 37

Conread position: 30-336
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 51, 37

Conread position: 40-336
Cow position:
Alignm length: 311
Alignm identity: 213
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 127

Conread position: 43-319
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 85, 116

Conread position: 43-333
Cow position:
Alignm length: 302
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 23

Conread position: 45-337
Cow position:
Alignm length: 302
Alignm identity: 205
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 163, 68

Conread position: 49-274
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 79, 18

Conread position: 51-300
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 18

Conread position: 51-339
Cow position:
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 15

Conread position: 53-319
Cow position:
Alignm length: 281
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 14

Conread position: 56-243
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 11

Conread position: 57-200
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 104

Conread position: 68-326
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 92

Conread position: 71-332
Cow position:
Alignm length: 273
Alignm identity: 187
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 90

Conread position: 80-331
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 79

Conread position: 81-206
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 86

Conread position: 81-322
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 79

Conread position: 82-267
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 77

Conread position: 90-329
Cow position:
Alignm length: 245
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 69

Conread position: 101-333
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 58

Conread position: 131-328
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 79, 27

Conread position: 131-345
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 35

Conread position: 132-336
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 78, 34

Conread position: 337-799
Cow position:
Alignm length: 478
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 341-803
Cow position:
Alignm length: 476
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 5

Conread position: 346-537
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 47

Conread position: 554-804
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.