Cow genome map

Conread name: Ss1.1-Thy1-THY010080G11.5

Conread position: 1-160
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 62

Conread position: 1-183
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 11

Conread position: 1-185
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 127, 63

Conread position: 1-192
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 63

Conread position: 1-207
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 41

Conread position: 1-232
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 84, 61

Conread position: 1-249
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 63

Conread position: 1-255
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 72

Conread position: 1-255
Cow position:
Alignm length: 261
Alignm identity: 180
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 124, 63

Conread position: 1-255
Cow position:
Alignm length: 260
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 158

Conread position: 1-298
Cow position:
Alignm length: 307
Alignm identity: 206
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 144, 115

Conread position: 1-310
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 131, 21

Conread position: 1-331
Cow position:
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 63

Conread position: 1-332
Cow position:
Alignm length: 348
Alignm identity: 231
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 124, 74

Conread position: 1-333
Cow position:
Alignm length: 340
Alignm identity: 221
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 124, 36

Conread position: 1-333
Cow position:
Alignm length: 343
Alignm identity: 237
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 69, 168

Conread position: 1-334
Cow position:
Alignm length: 338
Alignm identity: 219
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 64

Conread position: 1-334
Cow position:
Alignm length: 349
Alignm identity: 229
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 9

Conread position: 1-337
Cow position:
Alignm length: 345
Alignm identity: 225
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 159

Conread position: 1-337
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 128, 63

Conread position: 1-337
Cow position:
Alignm length: 349
Alignm identity: 248
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 126, 59

Conread position: 1-337
Cow position:
Alignm length: 341
Alignm identity: 221
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 71, 93

Conread position: 1-337
Cow position:
Alignm length: 351
Alignm identity: 225
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 119, 61

Conread position: 1-344
Cow position:
Alignm length: 355
Alignm identity: 239
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 25

Conread position: 1-355
Cow position:
Alignm length: 364
Alignm identity: 232
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 67

Conread position: 1-356
Cow position:
Alignm length: 370
Alignm identity: 248
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 126, 67

Conread position: 2-249
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 58, 79

Conread position: 2-257
Cow position:
Alignm length: 268
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 163

Conread position: 2-332
Cow position:
Alignm length: 334
Alignm identity: 222
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 207, 73

Conread position: 2-337
Cow position:
Alignm length: 342
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 123, 63

Conread position: 3-124
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 61

Conread position: 3-192
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 156

Conread position: 3-306
Cow position:
Alignm length: 316
Alignm identity: 212
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 157

Conread position: 3-328
Cow position:
Alignm length: 335
Alignm identity: 212
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 156

Conread position: 3-328
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 125, 323

Conread position: 3-337
Cow position:
Alignm length: 347
Alignm identity: 225
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 23

Conread position: 3-338
Cow position:
Alignm length: 348
Alignm identity: 236
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 121, 14

Conread position: 3-338
Cow position:
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 156

Conread position: 3-344
Cow position:
Alignm length: 348
Alignm identity: 233
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 80, 57

Conread position: 3-353
Cow position:
Alignm length: 366
Alignm identity: 249
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 51

Conread position: 4-225
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 65

Conread position: 4-275
Cow position:
Alignm length: 278
Alignm identity: 191
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 57, 157

Conread position: 4-327
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 125, 67

Conread position: 4-333
Cow position:
Alignm length: 340
Alignm identity: 237
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 52, 79

Conread position: 5-250
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 39

Conread position: 5-333
Cow position:
Alignm length: 336
Alignm identity: 214
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 44

Conread position: 6-193
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 77, 61

Conread position: 6-322
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 75, 61

Conread position: 6-326
Cow position:
Alignm length: 326
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 57

Conread position: 6-338
Cow position:
Alignm length: 337
Alignm identity: 226
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 122, 25

Conread position: 7-250
Cow position:
Alignm length: 250
Alignm identity: 164
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 78

Conread position: 9-306
Cow position:
Alignm length: 305
Alignm identity: 205
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 116, 29

Conread position: 11-337
Cow position:
Alignm length: 336
Alignm identity: 219
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 67, 148

Conread position: 12-151
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 12-162
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 114, 146

Conread position: 12-192
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 152

Conread position: 12-207
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 77, 127

Conread position: 12-208
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 152

Conread position: 12-255
Cow position:
Alignm length: 246
Alignm identity: 162
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 113, 147

Conread position: 12-256
Cow position:
Alignm length: 250
Alignm identity: 172
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 113, 39

Conread position: 12-265
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 113, 68

Conread position: 12-270
Cow position:
Alignm length: 266
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 68

Conread position: 12-288
Cow position:
Alignm length: 280
Alignm identity: 185
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 117, 147

Conread position: 12-306
Cow position:
Alignm length: 301
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 183, 113

Conread position: 12-332
Cow position:
Alignm length: 325
Alignm identity: 231
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 113, 51

Conread position: 12-332
Cow position:
Alignm length: 330
Alignm identity: 222
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 151

Conread position: 12-333
Cow position:
Alignm length: 337
Alignm identity: 220
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 63, 105

Conread position: 12-337
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 116, 51

Conread position: 12-345
Cow position:
Alignm length: 339
Alignm identity: 214
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 55

Conread position: 12-348
Cow position:
Alignm length: 344
Alignm identity: 215
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 69

Conread position: 12-351
Cow position:
Alignm length: 348
Alignm identity: 225
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 197, 54

Conread position: 13-336
Cow position:
Alignm length: 337
Alignm identity: 232
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 97, 41

Conread position: 13-345
Cow position:
Alignm length: 345
Alignm identity: 219
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 101

Conread position: 15-337
Cow position:
Alignm length: 328
Alignm identity: 228
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 113, 50

Conread position: 16-338
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 63, 144

Conread position: 17-332
Cow position:
Alignm length: 335
Alignm identity: 219
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 142

Conread position: 17-333
Cow position:
Alignm length: 330
Alignm identity: 220
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 97

Conread position: 19-193
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 148

Conread position: 21-255
Cow position:
Alignm length: 241
Alignm identity: 164
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 24

Conread position: 21-255
Cow position:
Alignm length: 242
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 140

Conread position: 21-331
Cow position:
Alignm length: 320
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 18

Conread position: 21-339
Cow position:
Alignm length: 329
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 43

Conread position: 23-173
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 55, 138

Conread position: 23-328
Cow position:
Alignm length: 313
Alignm identity: 204
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 103, 43

Conread position: 24-306
Cow position:
Alignm length: 293
Alignm identity: 193
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 104, 55

Conread position: 24-333
Cow position:
Alignm length: 318
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 185, 109

Conread position: 24-337
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 102, 40

Conread position: 24-344
Cow position:
Alignm length: 329
Alignm identity: 224
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 101, 27

Conread position: 26-259
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 53, 96

Conread position: 34-339
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 103, 47

Conread position: 37-335
Cow position:
Alignm length: 306
Alignm identity: 216
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 88, 27

Conread position: 37-337
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 108, 55

Conread position: 40-229
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 51

Conread position: 40-324
Cow position:
Alignm length: 290
Alignm identity: 192
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 68

Conread position: 42-268
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 83, 111

Conread position: 45-333
Cow position:
Alignm length: 296
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 82

Conread position: 48-306
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 17

Conread position: 53-328
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 73, 28

Conread position: 54-255
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 105

Conread position: 54-333
Cow position:
Alignm length: 287
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 10

Conread position: 59-336
Cow position:
Alignm length: 283
Alignm identity: 192
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 69, 44

Conread position: 60-328
Cow position:
Alignm length: 275
Alignm identity: 182
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 71, 19

Conread position: 60-328
Cow position:
Alignm length: 271
Alignm identity: 179
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 100

Conread position: 72-329
Cow position:
Alignm length: 263
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 70

Conread position: 77-303
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 82

Conread position: 82-333
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 43, 30

Conread position: 85-355
Cow position:
Alignm length: 280
Alignm identity: 194
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 41, 74

Conread position: 90-333
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 67

Conread position: 100-337
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 60

Conread position: 140-333
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 18

Conread position: 177-345
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 14

Conread position: 335-798
Cow position:
Alignm length: 485
Alignm identity: 324
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 12, 118

Conread position: 346-695
Cow position:
Alignm length: 360
Alignm identity: 242
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 32

Show alignments to all cow chromosomes.