Cow genome map
| Conread name: | Ss1.1-Thy1-THY010080G11.5 |
| Conread position: | 1-185 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 123, 63 |
| Conread position: | 1-255 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 85, 63 |
| Conread position: | 1-260 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 124, 25 |
| Conread position: | 1-266 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 160 |
| Conread position: | 1-268 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 1-284 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 124, 68 |
| Conread position: | 1-311 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 109 |
| Conread position: | 1-333 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 125, 62 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 124, 65 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 159 |
| Conread position: | 1-338 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 79, 161 |
| Conread position: | 1-344 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 85, 66 |
| Conread position: | 1-345 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 124, 44 |
| Conread position: | 1-370 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 45, 66 |
| Conread position: | 2-333 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 58, 307 |
| Conread position: | 2-333 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 124, 41 |
| Conread position: | 3-258 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 125, 61 |
| Conread position: | 3-261 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 122, 64 |
| Conread position: | 3-274 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 3-327 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 41 |
| Conread position: | 3-328 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 123, 61 |
| Conread position: | 3-333 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 3-333 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 204, 35 |
| Conread position: | 3-337 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 62 |
| Conread position: | 3-337 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 61 |
| Conread position: | 3-339 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 122, 61 |
| Conread position: | 4-333 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 75, 165 |
| Conread position: | 5-333 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 92, 54 |
| Conread position: | 6-207 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 63, 58 |
| Conread position: | 7-328 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 118, 31 |
| Conread position: | 11-227 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 150 |
| Conread position: | 11-337 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 12-173 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 156 |
| Conread position: | 12-192 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 12-192 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 113, 52 |
| Conread position: | 12-198 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 73, 148 |
| Conread position: | 12-205 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 111, 52 |
| Conread position: | 12-207 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 12-207 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 20, 154 |
| Conread position: | 12-207 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 12-250 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 114, 62 |
| Conread position: | 12-255 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 113, 52 |
| Conread position: | 12-255 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 155 |
| Conread position: | 12-268 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 99, 148 |
| Conread position: | 12-274 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 12-322 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 113, 52 |
| Conread position: | 12-331 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 114, 67 |
| Conread position: | 12-332 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 127, 75 |
| Conread position: | 12-333 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 113, 147 |
| Conread position: | 12-333 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 87, 100 |
| Conread position: | 12-333 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 69, 39 |
| Conread position: | 12-334 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 116, 53 |
| Conread position: | 12-337 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 60, 147 |
| Conread position: | 12-338 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 113, 63 |
| Conread position: | 12-338 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 153 |
| Conread position: | 13-187 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 151 |
| Conread position: | 14-333 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 112, 65 |
| Conread position: | 15-266 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 159 |
| Conread position: | 15-268 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 45, 147 |
| Conread position: | 19-333 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 106, 48 |
| Conread position: | 21-279 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 21-328 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 23-333 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 50, 137 |
| Conread position: | 23-337 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 24-186 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 101, 43 |
| Conread position: | 24-333 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 101, 51 |
| Conread position: | 24-346 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 35, 199 |
| Conread position: | 27-251 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 41 |
| Conread position: | 27-329 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 33-266 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 40-305 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 41-332 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 50-276 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 52-337 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 72-294 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 137, 85 |
| Conread position: | 72-321 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 72-336 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 81-328 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 127, 77 |
| Conread position: | 94-327 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 101-336 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 107-337 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 338-800 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 356-614 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 360-799 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 478-689 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 597-799 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 69, 188 |
| Conread position: | 635-799 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 27 |
Show alignments to all cow chromosomes.