Cow genome map

Conread name: Ss1.1-Thy1-THY010080G11.5

Conread position: 1-191
Cow position:
Alignm length: 192
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 78

Conread position: 1-192
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 124, 61

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 12

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 110

Conread position: 1-227
Cow position:
Alignm length: 234
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 63

Conread position: 1-233
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 36

Conread position: 1-249
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 47

Conread position: 1-251
Cow position:
Alignm length: 258
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 159

Conread position: 1-255
Cow position:
Alignm length: 259
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 158

Conread position: 1-255
Cow position:
Alignm length: 262
Alignm identity: 178
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 59

Conread position: 1-274
Cow position:
Alignm length: 283
Alignm identity: 195
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 64

Conread position: 1-289
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 127, 80

Conread position: 1-301
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 45, 64

Conread position: 1-316
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 64

Conread position: 1-326
Cow position:
Alignm length: 351
Alignm identity: 236
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 127, 18

Conread position: 1-329
Cow position:
Alignm length: 335
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 63

Conread position: 1-331
Cow position:
Alignm length: 348
Alignm identity: 224
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 68

Conread position: 1-332
Cow position:
Alignm length: 336
Alignm identity: 230
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 122, 37

Conread position: 1-333
Cow position:
Alignm length: 347
Alignm identity: 243
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 109, 41

Conread position: 1-333
Cow position:
Alignm length: 338
Alignm identity: 218
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 124, 66

Conread position: 1-336
Cow position:
Alignm length: 344
Alignm identity: 228
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 78, 163

Conread position: 1-337
Cow position:
Alignm length: 345
Alignm identity: 228
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 125, 35

Conread position: 1-337
Cow position:
Alignm length: 351
Alignm identity: 244
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 77, 66

Conread position: 1-337
Cow position:
Alignm length: 367
Alignm identity: 246
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 76, 30

Conread position: 2-333
Cow position:
Alignm length: 340
Alignm identity: 227
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 11

Conread position: 2-333
Cow position:
Alignm length: 334
Alignm identity: 218
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 10

Conread position: 3-204
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 3-249
Cow position:
Alignm length: 251
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 155

Conread position: 3-249
Cow position:
Alignm length: 253
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 72

Conread position: 3-328
Cow position:
Alignm length: 332
Alignm identity: 219
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 125, 64

Conread position: 3-331
Cow position:
Alignm length: 336
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 156

Conread position: 3-331
Cow position:
Alignm length: 341
Alignm identity: 236
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 33, 160

Conread position: 3-331
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 10, 61

Conread position: 3-333
Cow position:
Alignm length: 341
Alignm identity: 233
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 122, 61

Conread position: 3-337
Cow position:
Alignm length: 342
Alignm identity: 230
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 126, 24

Conread position: 4-211
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 22

Conread position: 4-316
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 62

Conread position: 6-206
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 54

Conread position: 6-250
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 119, 11

Conread position: 6-273
Cow position:
Alignm length: 278
Alignm identity: 186
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 67, 58

Conread position: 6-275
Cow position:
Alignm length: 280
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 20

Conread position: 6-321
Cow position:
Alignm length: 327
Alignm identity: 220
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 80, 155

Conread position: 6-332
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 50

Conread position: 6-337
Cow position:
Alignm length: 345
Alignm identity: 220
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 58

Conread position: 6-337
Cow position:
Alignm length: 347
Alignm identity: 230
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 136

Conread position: 7-204
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 118, 57

Conread position: 7-337
Cow position:
Alignm length: 339
Alignm identity: 230
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 118, 57

Conread position: 10-231
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 115, 49

Conread position: 10-337
Cow position:
Alignm length: 337
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 115, 54

Conread position: 12-187
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 40

Conread position: 12-207
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 114, 140

Conread position: 12-207
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 153

Conread position: 12-207
Cow position:
Alignm length: 198
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 147

Conread position: 12-207
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 183

Conread position: 12-207
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 113, 55

Conread position: 12-225
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 55

Conread position: 12-231
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 150, 0

Conread position: 12-250
Cow position:
Alignm length: 244
Alignm identity: 162
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 114, 67

Conread position: 12-250
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 113, 55

Conread position: 12-252
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 52

Conread position: 12-255
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 54

Conread position: 12-266
Cow position:
Alignm length: 260
Alignm identity: 170
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 113, 70

Conread position: 12-271
Cow position:
Alignm length: 269
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 155

Conread position: 12-306
Cow position:
Alignm length: 303
Alignm identity: 211
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 113, 84

Conread position: 12-315
Cow position:
Alignm length: 310
Alignm identity: 206
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 150, 68

Conread position: 12-327
Cow position:
Alignm length: 333
Alignm identity: 223
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 70

Conread position: 12-330
Cow position:
Alignm length: 327
Alignm identity: 224
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 117, 52

Conread position: 12-337
Cow position:
Alignm length: 332
Alignm identity: 209
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 63

Conread position: 14-255
Cow position:
Alignm length: 248
Alignm identity: 169
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 56, 50

Conread position: 14-333
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 88

Conread position: 14-338
Cow position:
Alignm length: 340
Alignm identity: 227
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 20, 38

Conread position: 14-338
Cow position:
Alignm length: 331
Alignm identity: 234
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 111, 30

Conread position: 15-198
Cow position:
Alignm length: 186
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 10

Conread position: 15-333
Cow position:
Alignm length: 326
Alignm identity: 210
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 26, 76

Conread position: 17-337
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 111, 81

Conread position: 18-328
Cow position:
Alignm length: 326
Alignm identity: 216
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 148

Conread position: 19-333
Cow position:
Alignm length: 325
Alignm identity: 226
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 107, 48

Conread position: 21-207
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 43

Conread position: 21-243
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 184, 55

Conread position: 21-256
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 210, 83

Conread position: 21-300
Cow position:
Alignm length: 289
Alignm identity: 190
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 126

Conread position: 21-337
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 104, 138

Conread position: 21-338
Cow position:
Alignm length: 330
Alignm identity: 222
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 104, 51

Conread position: 21-338
Cow position:
Alignm length: 324
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 24

Conread position: 22-243
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 113, 58

Conread position: 22-333
Cow position:
Alignm length: 324
Alignm identity: 207
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 137

Conread position: 22-353
Cow position:
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 53

Conread position: 24-284
Cow position:
Alignm length: 267
Alignm identity: 177
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 77

Conread position: 24-319
Cow position:
Alignm length: 304
Alignm identity: 215
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 101, 34

Conread position: 27-260
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 43

Conread position: 27-300
Cow position:
Alignm length: 292
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 37

Conread position: 27-337
Cow position:
Alignm length: 321
Alignm identity: 228
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 98, 71

Conread position: 27-337
Cow position:
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 50

Conread position: 38-338
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 88, 26

Conread position: 47-337
Cow position:
Alignm length: 300
Alignm identity: 201
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 34

Conread position: 48-243
Cow position:
Alignm length: 200
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 86, 123

Conread position: 49-337
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 15

Conread position: 51-319
Cow position:
Alignm length: 274
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 91

Conread position: 51-359
Cow position:
Alignm length: 319
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 13

Conread position: 54-300
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 10

Conread position: 73-338
Cow position:
Alignm length: 274
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 68

Conread position: 75-333
Cow position:
Alignm length: 267
Alignm identity: 175
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 84

Conread position: 75-337
Cow position:
Alignm length: 277
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 85

Conread position: 76-289
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 5, 78

Conread position: 76-337
Cow position:
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 83

Conread position: 80-273
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 97

Conread position: 80-337
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 62

Conread position: 82-335
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 74

Conread position: 86-337
Cow position:
Alignm length: 258
Alignm identity: 182
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 15

Conread position: 90-304
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 70

Conread position: 90-315
Cow position:
Alignm length: 227
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 141

Conread position: 99-333
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 43

Conread position: 337-761
Cow position:
Alignm length: 448
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 77

Conread position: 338-474
Cow position:
Alignm length: 143
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 72

Conread position: 341-559
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 5

Conread position: 610-799
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 165, 0

Conread position: 610-799
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 73

Show alignments to all cow chromosomes.