Cow genome map
| Conread name: | Ss1.1-Thy1-THY010080G11.5 |
| Conread position: | 1-182 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 74 |
| Conread position: | 1-205 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 1-206 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 69, 159 |
| Conread position: | 1-207 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 63 |
| Conread position: | 1-207 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 1-207 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-222 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 1-249 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 1-255 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 36, 81 |
| Conread position: | 1-260 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 124, 80 |
| Conread position: | 1-267 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 1-273 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 78, 101 |
| Conread position: | 1-292 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 69, 65 |
| Conread position: | 1-311 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 72, 63 |
| Conread position: | 1-316 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 138, 35 |
| Conread position: | 1-320 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 44 |
| Conread position: | 1-326 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 124, 73 |
| Conread position: | 1-331 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 126, 62 |
| Conread position: | 1-332 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 1-333 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 72, 63 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 8 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 163 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 211, 67 |
| Conread position: | 1-337 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 123, 66 |
| Conread position: | 2-284 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 77, 119 |
| Conread position: | 2-292 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 79, 158 |
| Conread position: | 2-329 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 81, 62 |
| Conread position: | 2-333 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 123, 84 |
| Conread position: | 2-333 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 158 |
| Conread position: | 2-333 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 151, 85 |
| Conread position: | 3-187 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 3-261 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 157 |
| Conread position: | 3-314 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 78, 23 |
| Conread position: | 3-331 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 123, 61 |
| Conread position: | 3-331 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 93, 108 |
| Conread position: | 3-337 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 3-369 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 123, 72 |
| Conread position: | 4-304 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 78 |
| Conread position: | 6-195 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 6-255 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 82, 61 |
| Conread position: | 11-187 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 157 |
| Conread position: | 11-230 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 147 |
| Conread position: | 11-338 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 18 |
| Conread position: | 12-206 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 12-207 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 55 |
| Conread position: | 12-207 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 163 |
| Conread position: | 12-228 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 156 |
| Conread position: | 12-256 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 55, 146 |
| Conread position: | 12-272 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 118, 55 |
| Conread position: | 12-318 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 156 |
| Conread position: | 12-330 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 12-333 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 26 |
| Conread position: | 12-333 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 161 |
| Conread position: | 12-337 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 10 |
| Conread position: | 12-337 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 118, 156 |
| Conread position: | 13-334 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 15-207 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 111, 144 |
| Conread position: | 15-251 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 109, 49 |
| Conread position: | 15-333 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 113, 144 |
| Conread position: | 17-328 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 19-333 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 132 |
| Conread position: | 21-260 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 43, 144 |
| Conread position: | 21-333 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 103, 45 |
| Conread position: | 21-338 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 43 |
| Conread position: | 23-205 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 138 |
| Conread position: | 23-331 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 103, 24 |
| Conread position: | 24-346 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 221, 104 |
| Conread position: | 27-155 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 27-307 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 29-337 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 36-207 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 36-327 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 89, 28 |
| Conread position: | 37-337 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 87, 116 |
| Conread position: | 41-337 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 45-331 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 74-344 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 76-333 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 81 |
| Conread position: | 77-333 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 82 |
| Conread position: | 81-339 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 81-345 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 78 |
| Conread position: | 84-236 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 105-335 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 114-273 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 120-339 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 337-566 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 338-799 |
| Cow position: | |
| Alignm length: | 484 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 76 |
| Conread position: | 341-799 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 5 |
| Conread position: | 356-796 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 52 |
| Conread position: | 364-800 |
| Cow position: | |
| Alignm length: | 443 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 612-800 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 78, 139 |
Show alignments to all cow chromosomes.