Cow genome map
| Conread name: | Ss1.1-Thy1-THY010080G11.5 |
| Conread position: | 1-167 |
| Cow position: | chrX:40478771-40478602 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 160 |
| Conread position: | 1-192 |
| Cow position: | chrX:40707831-40707645 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 125, 64 |
| Conread position: | 1-201 |
| Cow position: | chrX:13524237-13524433 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 124, 66 |
| Conread position: | 1-206 |
| Cow position: | chrX:24923213-24923014 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 124, 85 |
| Conread position: | 1-206 |
| Cow position: | chrX:37489088-37488886 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 125, 65 |
| Conread position: | 1-207 |
| Cow position: | chrX:4482316-4482114 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 124, 74 |
| Conread position: | 1-207 |
| Cow position: | chrX:21592654-21592447 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 63 |
| Conread position: | 1-208 |
| Cow position: | chrX:27408099-27408304 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 123, 63 |
| Conread position: | 1-217 |
| Cow position: | chrX:37544342-37544129 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 123, 59 |
| Conread position: | 1-232 |
| Cow position: | chrX:2324070-2323835 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 127, 158 |
| Conread position: | 1-251 |
| Cow position: | chrX:40070247-40070502 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 78, 159 |
| Conread position: | 1-255 |
| Cow position: | chrX:27704961-27704705 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 125, 78 |
| Conread position: | 1-255 |
| Cow position: | chrX:38852522-38852267 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 125, 66 |
| Conread position: | 1-259 |
| Cow position: | chrX:17663556-17663815 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 208, 65 |
| Conread position: | 1-268 |
| Cow position: | chrX:16325166-16325432 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 122, 63 |
| Conread position: | 1-275 |
| Cow position: | chrX:19556378-19556104 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 198, 50 |
| Conread position: | 1-290 |
| Cow position: | chrX:677733-678033 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 12, 8 |
| Conread position: | 1-291 |
| Cow position: | chrX:4498994-4498700 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 73, 25 |
| Conread position: | 1-294 |
| Cow position: | chrX:40365380-40365684 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 161 |
| Conread position: | 1-295 |
| Cow position: | chrX:23218430-23218135 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 68 |
| Conread position: | 1-297 |
| Cow position: | chrX:22102411-22102701 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 167, 66 |
| Conread position: | 1-312 |
| Cow position: | chrX:19880362-19880047 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 1-315 |
| Cow position: | chrX:23927821-23928118 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 111, 78 |
| Conread position: | 1-317 |
| Cow position: | chrX:28080154-28079844 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 124, 138 |
| Conread position: | 1-331 |
| Cow position: | chrX:28666589-28666933 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 72, 172 |
| Conread position: | 1-333 |
| Cow position: | chrX:3211182-3211513 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 124, 66 |
| Conread position: | 1-333 |
| Cow position: | chrX:13178244-13178584 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 124, 159 |
| Conread position: | 1-333 |
| Cow position: | chrX:18769272-18768945 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 125, 21 |
| Conread position: | 1-333 |
| Cow position: | chrX:28156898-28156563 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 82, 169 |
| Conread position: | 1-333 |
| Cow position: | chrX:39559003-39559330 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 1-336 |
| Cow position: | chrX:23974080-23974417 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 127, 102 |
| Conread position: | 1-337 |
| Cow position: | chrX:25146919-25146580 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 127, 26 |
| Conread position: | 1-338 |
| Cow position: | chrX:6026337-6026679 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 132, 68 |
| Conread position: | 1-338 |
| Cow position: | chrX:43789476-43789800 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 1-370 |
| Cow position: | chrX:24888776-24889138 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 127, 62 |
| Conread position: | 1-370 |
| Cow position: | chrX:25015104-25015472 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 63 |
| Conread position: | 2-240 |
| Cow position: | chrX:2247996-2248229 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 79, 24 |
| Conread position: | 2-327 |
| Cow position: | chrX:1430395-1430062 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 52, 101 |
| Conread position: | 2-330 |
| Cow position: | chrX:18247711-18247382 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 123, 78 |
| Conread position: | 2-337 |
| Cow position: | chrX:16061095-16061430 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 84, 160 |
| Conread position: | 3-187 |
| Cow position: | chrX:42539960-42539780 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 125, 74 |
| Conread position: | 3-206 |
| Cow position: | chrX:13537153-13536950 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 117, 29 |
| Conread position: | 3-255 |
| Cow position: | chrX:16782641-16782386 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 63 |
| Conread position: | 3-268 |
| Cow position: | chrX:31372823-31372556 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 3-331 |
| Cow position: | chrX:23032823-23032500 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 123, 52 |
| Conread position: | 3-336 |
| Cow position: | chrX:19163462-19163793 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 70, 61 |
| Conread position: | 3-338 |
| Cow position: | chrX:23314452-23314784 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 3-338 |
| Cow position: | chrX:37905373-37905061 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 203, 107 |
| Conread position: | 3-338 |
| Cow position: | chrX:41106645-41106961 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 51, 62 |
| Conread position: | 3-339 |
| Cow position: | chrX:35829405-35829739 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 4-331 |
| Cow position: | chrX:10440474-10440805 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 121, 49 |
| Conread position: | 5-333 |
| Cow position: | chrX:17610101-17610432 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 123, 49 |
| Conread position: | 6-331 |
| Cow position: | chrX:22125497-22125830 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 6-333 |
| Cow position: | chrX:24232237-24231907 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 73, 58 |
| Conread position: | 6-345 |
| Cow position: | chrX:11448722-11449064 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 119, 73 |
| Conread position: | 6-346 |
| Cow position: | chrX:5303402-5303736 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 118, 153 |
| Conread position: | 7-272 |
| Cow position: | chrX:2607863-2607590 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 58 |
| Conread position: | 7-328 |
| Cow position: | chrX:1789591-1789269 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 11-207 |
| Cow position: | chrX:41733838-41734035 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 11-335 |
| Cow position: | chrX:32003070-32003397 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 117, 12 |
| Conread position: | 11-337 |
| Cow position: | chrX:19650148-19650471 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 117, 148 |
| Conread position: | 12-201 |
| Cow position: | chrX:17487245-17487438 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 52 |
| Conread position: | 12-206 |
| Cow position: | chrX:26340735-26340919 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 12-206 |
| Cow position: | chrX:41527163-41527357 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 63 |
| Conread position: | 12-249 |
| Cow position: | chrX:13800471-13800707 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 22, 67 |
| Conread position: | 12-251 |
| Cow position: | chrX:24006477-24006720 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 57, 52 |
| Conread position: | 12-255 |
| Cow position: | chrX:17891899-17891652 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 148 |
| Conread position: | 12-260 |
| Cow position: | chrX:508800-509043 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 116, 52 |
| Conread position: | 12-266 |
| Cow position: | chrX:24129657-24129396 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 12-268 |
| Cow position: | chrX:30681152-30681410 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 12-269 |
| Cow position: | chrX:4751020-4751275 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 113, 55 |
| Conread position: | 12-271 |
| Cow position: | chrX:4408913-4408642 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 12-274 |
| Cow position: | chrX:9438852-9438595 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 113, 35 |
| Conread position: | 12-284 |
| Cow position: | chrX:39463690-39463974 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 70, 152 |
| Conread position: | 12-289 |
| Cow position: | chrX:2790589-2790314 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 12-292 |
| Cow position: | chrX:25282141-25282431 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 12-300 |
| Cow position: | chrX:25738401-25738118 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 116, 52 |
| Conread position: | 12-323 |
| Cow position: | chrX:5667683-5668006 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 74, 46 |
| Conread position: | 12-330 |
| Cow position: | chrX:21191220-21190889 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 28, 161 |
| Conread position: | 12-330 |
| Cow position: | chrX:38569832-38569514 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 116, 52 |
| Conread position: | 12-333 |
| Cow position: | chrX:17158466-17158784 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 113, 52 |
| Conread position: | 12-336 |
| Cow position: | chrX:34442090-34442410 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 52 |
| Conread position: | 12-338 |
| Cow position: | chrX:3952204-3951884 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 12-338 |
| Cow position: | chrX:42380490-42380822 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 12-342 |
| Cow position: | chrX:20503998-20503659 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 13-205 |
| Cow position: | chrX:37364073-37363881 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 113, 77 |
| Conread position: | 13-208 |
| Cow position: | chrX:337047-336854 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 13-315 |
| Cow position: | chrX:19595276-19594967 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 13-328 |
| Cow position: | chrX:12102614-12102934 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 112, 89 |
| Conread position: | 13-333 |
| Cow position: | chrX:7181809-7181492 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 13-333 |
| Cow position: | chrX:17158772-17159091 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 113, 6 |
| Conread position: | 13-356 |
| Cow position: | chrX:15306526-15306868 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 239 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 113, 65 |
| Conread position: | 14-332 |
| Cow position: | chrX:39903155-39903467 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 14-333 |
| Cow position: | chrX:19929784-19929459 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 111, 53 |
| Conread position: | 15-225 |
| Cow position: | chrX:12095239-12095453 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 49 |
| Conread position: | 15-271 |
| Cow position: | chrX:11588337-11588600 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 151 |
| Conread position: | 15-333 |
| Cow position: | chrX:43246310-43245982 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 15-337 |
| Cow position: | chrX:41847181-41847510 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 19-262 |
| Cow position: | chrX:343529-343281 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 20-306 |
| Cow position: | chrX:25144430-25144152 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 125, 7 |
| Conread position: | 21-302 |
| Cow position: | chrX:37795132-37795417 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 42, 48 |
| Conread position: | 21-338 |
| Cow position: | chrX:41304888-41305211 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 79, 128 |
| Conread position: | 21-339 |
| Cow position: | chrX:2569778-2570097 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 34, 62 |
| Conread position: | 23-266 |
| Cow position: | chrX:31379296-31379051 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 44 |
| Conread position: | 24-193 |
| Cow position: | chrX:34009092-34008921 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 136 |
| Conread position: | 24-331 |
| Cow position: | chrX:3245824-3246133 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 5, 125 |
| Conread position: | 24-337 |
| Cow position: | chrX:24031666-24031967 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 179, 71 |
| Conread position: | 24-338 |
| Cow position: | chrX:29029359-29029682 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 104, 83 |
| Conread position: | 27-333 |
| Cow position: | chrX:25320923-25321225 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 183, 112 |
| Conread position: | 28-298 |
| Cow position: | chrX:35935444-35935713 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 182, 14 |
| Conread position: | 32-335 |
| Cow position: | chrX:10998305-10998004 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 33-332 |
| Cow position: | chrX:15568557-15568852 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 39, 31 |
| Conread position: | 40-337 |
| Cow position: | chrX:20652739-20652435 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 42-250 |
| Cow position: | chrX:15340535-15340746 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 159 |
| Conread position: | 42-338 |
| Cow position: | chrX:10409766-10410069 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 45-279 |
| Cow position: | chrX:11798470-11798222 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 39, 126 |
| Conread position: | 45-333 |
| Cow position: | chrX:8400245-8400526 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 27, 22 |
| Conread position: | 46-346 |
| Cow position: | chrX:18153163-18153466 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 49-333 |
| Cow position: | chrX:5566717-5567009 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 49-336 |
| Cow position: | chrX:10455009-10454718 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 53-228 |
| Cow position: | chrX:8103971-8104149 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 72, 87 |
| Conread position: | 56-266 |
| Cow position: | chrX:15993753-15993539 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 58-327 |
| Cow position: | chrX:31804192-31803918 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 58-336 |
| Cow position: | chrX:13266762-13266481 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 67, 120 |
| Conread position: | 72-336 |
| Cow position: | chrX:16858396-16858651 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 88 |
| Conread position: | 75-268 |
| Cow position: | chrX:48812677-48812479 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 53, 85 |
| Conread position: | 76-289 |
| Cow position: | chrX:23515177-23515413 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 5, 91 |
| Conread position: | 80-333 |
| Cow position: | chrX:2271902-2271642 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 81-333 |
| Cow position: | chrX:27071127-27070869 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 81-333 |
| Cow position: | chrX:37753694-37753447 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 83-336 |
| Cow position: | chrX:21658827-21658567 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 106-333 |
| Cow position: | chrX:1793931-1794163 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 114-337 |
| Cow position: | chrX:23353120-23352891 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 131-337 |
| Cow position: | chrX:1449423-1449213 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 115, 27 |
| Conread position: | 160-330 |
| Cow position: | chrX:39387247-39387425 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 335-551 |
| Cow position: | chrX:10418071-10417852 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 341-578 |
| Cow position: | chrX:28875535-28875296 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 362-776 |
| Cow position: | chrX:13417902-13417480 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 57 |
| Conread position: | 507-744 |
| Cow position: | chrX:6251190-6250967 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 589-798 |
| Cow position: | chrX:10417554-10417354 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 14 |
Show alignments to all cow chromosomes.