Cow genome map
| Conread name: | Ss1.1-Thy1-THY010088C10.5 |
| Conread position: | 4-266 |
| Cow position: | chr12:26356458-26356726 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 15 |
| Conread position: | 27-250 |
| Cow position: | chr12:15050399-15050622 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 140, 13 |
| Conread position: | 29-263 |
| Cow position: | chr12:1952584-1952814 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 32-264 |
| Cow position: | chr12:11057087-11056862 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 200, 35 |
| Conread position: | 52-249 |
| Cow position: | chr12:17250708-17250514 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 54-266 |
| Cow position: | chr12:18103416-18103627 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 56-266 |
| Cow position: | chr12:29674940-29675157 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 58-266 |
| Cow position: | chr12:43474958-43474745 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 59-266 |
| Cow position: | chr12:31530493-31530281 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 59-266 |
| Cow position: | chr12:37480643-37480850 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 61-265 |
| Cow position: | chr12:37008520-37008722 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 199, 12 |
| Conread position: | 61-294 |
| Cow position: | chr12:9143574-9143342 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 62-262 |
| Cow position: | chr12:22323073-22323285 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 62-264 |
| Cow position: | chr12:18123855-18123656 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 63-263 |
| Cow position: | chr12:44861064-44861272 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 63-266 |
| Cow position: | chr12:26357179-26357386 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 112, 18 |
| Conread position: | 63-266 |
| Cow position: | chr12:29966298-29966090 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 17, 200 |
| Conread position: | 64-266 |
| Cow position: | chr12:42602045-42602258 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 65-239 |
| Cow position: | chr12:37718579-37718759 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 65-239 |
| Cow position: | chr12:37742490-37742310 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 65-263 |
| Cow position: | chr12:23714860-23714663 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 65-266 |
| Cow position: | chr12:27563191-27563392 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 99, 8 |
| Conread position: | 66-228 |
| Cow position: | chr12:14360831-14360665 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 66-253 |
| Cow position: | chr12:11272641-11272828 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 109, 115 |
| Conread position: | 66-265 |
| Cow position: | chr12:16386267-16386471 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 31, 42 |
| Conread position: | 66-266 |
| Cow position: | chr12:9866570-9866779 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 66-266 |
| Cow position: | chr12:21780356-21780147 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 66-266 |
| Cow position: | chr12:25989025-25989222 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 67-265 |
| Cow position: | chr12:35137108-35136904 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 67-266 |
| Cow position: | chr12:35368834-35368627 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 68-218 |
| Cow position: | chr12:6719575-6719420 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 23 |
| Conread position: | 68-235 |
| Cow position: | chr12:37420317-37420490 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 68-238 |
| Cow position: | chr12:32808430-32808600 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 68-249 |
| Cow position: | chr12:3454883-3454696 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 84, 57 |
| Conread position: | 68-265 |
| Cow position: | chr12:25280317-25280516 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 68-266 |
| Cow position: | chr12:29195481-29195280 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 95, 5 |
| Conread position: | 68-266 |
| Cow position: | chr12:39149860-39150067 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 68-266 |
| Cow position: | chr12:40910098-40910304 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 130 |
| Conread position: | 68-272 |
| Cow position: | chr12:31602637-31602843 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 96, 5 |
| Conread position: | 69-258 |
| Cow position: | chr12:5554153-5554341 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 69-282 |
| Cow position: | chr12:38343737-38343519 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 70-200 |
| Cow position: | chr12:37137369-37137499 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-252 |
| Cow position: | chr12:12699454-12699642 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 70-253 |
| Cow position: | chr12:17269987-17269800 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 70-253 |
| Cow position: | chr12:43974476-43974287 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 70-259 |
| Cow position: | chr12:12233066-12232871 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 70-266 |
| Cow position: | chr12:1889393-1889593 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 70-266 |
| Cow position: | chr12:22752813-22752610 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 70-266 |
| Cow position: | chr12:23106120-23105922 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 98, 7 |
| Conread position: | 70-266 |
| Cow position: | chr12:31269345-31269139 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 70-266 |
| Cow position: | chr12:35664143-35663948 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 70-266 |
| Cow position: | chr12:39339895-39339696 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 70-266 |
| Cow position: | chr12:39735482-39735679 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 89, 80 |
| Conread position: | 70-266 |
| Cow position: | chr12:45782408-45782211 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 70-267 |
| Cow position: | chr12:11230414-11230219 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 70-275 |
| Cow position: | chr12:44022603-44022396 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 103, 50 |
| Conread position: | 71-266 |
| Cow position: | chr12:21393893-21393691 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 72-253 |
| Cow position: | chr12:17701853-17702031 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 33, 81 |
| Conread position: | 72-254 |
| Cow position: | chr12:13643416-13643229 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 72-266 |
| Cow position: | chr12:4720127-4719932 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 72-266 |
| Cow position: | chr12:6187927-6188129 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 72-266 |
| Cow position: | chr12:10942476-10942272 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 72-266 |
| Cow position: | chr12:12637007-12637198 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 91, 21 |
| Conread position: | 72-266 |
| Cow position: | chr12:22515553-22515747 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 135 |
| Conread position: | 72-266 |
| Cow position: | chr12:24396984-24397178 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 95, 8 |
| Conread position: | 72-266 |
| Cow position: | chr12:41989499-41989700 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 73-204 |
| Cow position: | chr12:6278354-6278485 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-251 |
| Cow position: | chr12:33851535-33851357 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 73-253 |
| Cow position: | chr12:20654300-20654480 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 73-253 |
| Cow position: | chr12:38679234-38679047 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 73-264 |
| Cow position: | chr12:7884497-7884694 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 73-265 |
| Cow position: | chr12:27802876-27803064 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 8, 99 |
| Conread position: | 73-265 |
| Cow position: | chr12:35310500-35310699 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 24, 163 |
| Conread position: | 73-266 |
| Cow position: | chr12:4182107-4182302 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 153 |
| Conread position: | 73-266 |
| Cow position: | chr12:6958400-6958204 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 73-266 |
| Cow position: | chr12:13911394-13911596 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 73-266 |
| Cow position: | chr12:14223164-14222966 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 73-266 |
| Cow position: | chr12:25823046-25823242 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 73-266 |
| Cow position: | chr12:31237776-31237976 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 12, 66 |
| Conread position: | 73-266 |
| Cow position: | chr12:34161583-34161398 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 73-266 |
| Cow position: | chr12:38126337-38126539 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 73-266 |
| Cow position: | chr12:38154886-38155086 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 73-273 |
| Cow position: | chr12:30590951-30590745 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 73-273 |
| Cow position: | chr12:40043191-40042990 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 190 |
| Conread position: | 74-213 |
| Cow position: | chr12:11168049-11167904 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 74-233 |
| Cow position: | chr12:39738117-39738281 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 85, 133 |
| Conread position: | 74-243 |
| Cow position: | chr12:20637358-20637528 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 99, 128 |
| Conread position: | 74-266 |
| Cow position: | chr12:6206514-6206316 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 89, 164 |
| Conread position: | 74-266 |
| Cow position: | chr12:9130084-9129894 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 74-266 |
| Cow position: | chr12:9482122-9482320 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 87, 134 |
| Conread position: | 74-266 |
| Cow position: | chr12:27176818-27176625 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 74-266 |
| Cow position: | chr12:27192186-27192379 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 74-266 |
| Cow position: | chr12:43551036-43551237 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 74-278 |
| Cow position: | chr12:38691738-38691948 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 75-242 |
| Cow position: | chr12:27663811-27663985 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 75-253 |
| Cow position: | chr12:23446895-23446718 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 75-254 |
| Cow position: | chr12:42951513-42951691 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 76-229 |
| Cow position: | chr12:9055237-9055397 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 76-242 |
| Cow position: | chr12:22291311-22291477 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-243 |
| Cow position: | chr12:4109224-4109051 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 76-259 |
| Cow position: | chr12:20776754-20776933 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 15 |
| Conread position: | 76-265 |
| Cow position: | chr12:36500769-36500962 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 76-266 |
| Cow position: | chr12:15358522-15358325 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 76-266 |
| Cow position: | chr12:35469272-35469462 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 114 |
| Conread position: | 77-193 |
| Cow position: | chr12:30834575-30834693 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 77-251 |
| Cow position: | chr12:8842117-8842298 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 77-251 |
| Cow position: | chr12:38031965-38032140 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 77-252 |
| Cow position: | chr12:3371676-3371858 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 124 |
| Conread position: | 77-253 |
| Cow position: | chr12:17254319-17254139 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 77-253 |
| Cow position: | chr12:23917017-23916840 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 77-253 |
| Cow position: | chr12:41684682-41684505 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 77-263 |
| Cow position: | chr12:13988551-13988357 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 77-264 |
| Cow position: | chr12:25561543-25561357 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 77-264 |
| Cow position: | chr12:30745893-30745703 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 103, 148 |
| Conread position: | 77-266 |
| Cow position: | chr12:22048101-22047909 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 86, 184 |
| Conread position: | 77-266 |
| Cow position: | chr12:25343962-25343766 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 77-266 |
| Cow position: | chr12:26749774-26749967 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 87, 16 |
| Conread position: | 77-266 |
| Cow position: | chr12:27385666-27385475 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 150 |
| Conread position: | 77-266 |
| Cow position: | chr12:30042905-30042710 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 77-266 |
| Cow position: | chr12:31948288-31948100 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 77-266 |
| Cow position: | chr12:43427621-43427817 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 77-266 |
| Cow position: | chr12:45136783-45136588 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 21, 33 |
| Conread position: | 77-275 |
| Cow position: | chr12:6754366-6754172 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 78-201 |
| Cow position: | chr12:10491691-10491568 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 78-217 |
| Cow position: | chr12:26670243-26670097 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 78-240 |
| Cow position: | chr12:45207620-45207449 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 78-242 |
| Cow position: | chr12:13995618-13995789 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 78-253 |
| Cow position: | chr12:24032665-24032494 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 78-254 |
| Cow position: | chr12:1089214-1089396 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 165 |
| Conread position: | 78-264 |
| Cow position: | chr12:35240925-35241118 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 122 |
| Conread position: | 78-266 |
| Cow position: | chr12:6241998-6242194 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 78-266 |
| Cow position: | chr12:15103453-15103258 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 78-266 |
| Cow position: | chr12:25027583-25027777 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 78-266 |
| Cow position: | chr12:41776272-41776083 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 43 |
| Conread position: | 78-266 |
| Cow position: | chr12:42282663-42282854 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 78-294 |
| Cow position: | chr12:17252026-17252243 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 79-266 |
| Cow position: | chr12:42286141-42285955 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 60 |
| Conread position: | 80-263 |
| Cow position: | chr12:42967169-42966983 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 85, 111 |
| Conread position: | 80-266 |
| Cow position: | chr12:26868640-26868828 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 81-249 |
| Cow position: | chr12:24532449-24532623 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 154 |
| Conread position: | 81-251 |
| Cow position: | chr12:14987973-14987799 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 81-253 |
| Cow position: | chr12:37169776-37169948 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 85, 57 |
| Conread position: | 81-263 |
| Cow position: | chr12:2734738-2734920 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 145, 119 |
| Conread position: | 81-264 |
| Cow position: | chr12:28131765-28131576 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 81-266 |
| Cow position: | chr12:32374772-32374577 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 81-266 |
| Cow position: | chr12:45001895-45002082 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 82-229 |
| Cow position: | chr12:39431741-39431594 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 45 |
| Conread position: | 82-238 |
| Cow position: | chr12:25819530-25819688 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 82-264 |
| Cow position: | chr12:45304062-45303883 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 82-266 |
| Cow position: | chr12:24023639-24023817 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 82-271 |
| Cow position: | chr12:13096023-13095842 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 83-238 |
| Cow position: | chr12:3579654-3579498 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 84, 10 |
| Conread position: | 83-266 |
| Cow position: | chr12:3586285-3586103 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 83-296 |
| Cow position: | chr12:34878009-34877785 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 84-253 |
| Cow position: | chr12:38774075-38774245 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 84-264 |
| Cow position: | chr12:10827956-10827772 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 84-265 |
| Cow position: | chr12:11587939-11587760 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 84-265 |
| Cow position: | chr12:26146999-26147184 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 83, 13 |
| Conread position: | 85-250 |
| Cow position: | chr12:42562067-42561902 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 90, 46 |
| Conread position: | 85-251 |
| Cow position: | chr12:17108321-17108159 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 129, 7 |
| Conread position: | 85-266 |
| Cow position: | chr12:16056686-16056873 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 85-266 |
| Cow position: | chr12:48415351-48415531 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 85-270 |
| Cow position: | chr12:19261364-19261176 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 85-274 |
| Cow position: | chr12:36790645-36790835 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 86-262 |
| Cow position: | chr12:21922608-21922439 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 79 |
| Conread position: | 86-264 |
| Cow position: | chr12:18518840-18518660 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 86-266 |
| Cow position: | chr12:20404320-20404133 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 86-266 |
| Cow position: | chr12:28787897-28788078 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 86-266 |
| Cow position: | chr12:31926024-31925837 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 86-266 |
| Cow position: | chr12:34333284-34333095 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 86-267 |
| Cow position: | chr12:37123821-37123634 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 11, 104 |
| Conread position: | 87-251 |
| Cow position: | chr12:42749611-42749437 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 87-266 |
| Cow position: | chr12:30946913-30946728 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 87-266 |
| Cow position: | chr12:33976370-33976184 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 88-266 |
| Cow position: | chr12:18563328-18563148 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 88-283 |
| Cow position: | chr12:46065031-46064828 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 34 |
| Conread position: | 89-266 |
| Cow position: | chr12:25417413-25417585 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 91-268 |
| Cow position: | chr12:29057553-29057372 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 92-254 |
| Cow position: | chr12:38220401-38220233 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 92-266 |
| Cow position: | chr12:4954983-4954812 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 92-294 |
| Cow position: | chr12:36261856-36261644 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 93-249 |
| Cow position: | chr12:4769080-4768927 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 93-252 |
| Cow position: | chr12:2964207-2964046 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 93-252 |
| Cow position: | chr12:48578996-48578842 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 93-253 |
| Cow position: | chr12:29180835-29180673 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 93-253 |
| Cow position: | chr12:36544483-36544643 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 108 |
| Conread position: | 93-256 |
| Cow position: | chr12:44822443-44822287 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 161, 73 |
| Conread position: | 93-260 |
| Cow position: | chr12:18582838-18583005 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 158, 31 |
| Conread position: | 93-263 |
| Cow position: | chr12:29731472-29731302 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 93-264 |
| Cow position: | chr12:14986908-14986736 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 77, 98 |
| Conread position: | 93-264 |
| Cow position: | chr12:43619444-43619267 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 78, 32 |
| Conread position: | 93-265 |
| Cow position: | chr12:11836389-11836220 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 93-265 |
| Cow position: | chr12:35770863-35771035 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 93-266 |
| Cow position: | chr12:10895393-10895568 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 69, 23 |
| Conread position: | 93-266 |
| Cow position: | chr12:15496058-15495884 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 93-266 |
| Cow position: | chr12:17879144-17879316 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 93-266 |
| Cow position: | chr12:25528401-25528575 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 28 |
| Conread position: | 93-266 |
| Cow position: | chr12:41316949-41317128 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 70, 156 |
| Conread position: | 93-266 |
| Cow position: | chr12:42160396-42160574 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 94 |
| Conread position: | 93-305 |
| Cow position: | chr12:26234003-26234216 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 94-246 |
| Cow position: | chr12:41420699-41420861 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 94-251 |
| Cow position: | chr12:17490373-17490215 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 56 |
| Conread position: | 94-252 |
| Cow position: | chr12:4512291-4512451 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 94-253 |
| Cow position: | chr12:7501064-7500907 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 146, 85 |
| Conread position: | 94-254 |
| Cow position: | chr12:18561699-18561533 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 94-266 |
| Cow position: | chr12:3057249-3057072 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 94 |
| Conread position: | 94-266 |
| Cow position: | chr12:28699620-28699795 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 95-266 |
| Cow position: | chr12:24152501-24152323 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 91 |
| Conread position: | 95-266 |
| Cow position: | chr12:43855049-43854879 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 96-253 |
| Cow position: | chr12:33949058-33948902 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 97-253 |
| Cow position: | chr12:40157871-40158025 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 97-264 |
| Cow position: | chr12:22859607-22859450 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 97-264 |
| Cow position: | chr12:26576049-26575883 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 97-266 |
| Cow position: | chr12:3623848-3623679 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-266 |
| Cow position: | chr12:5635295-5635468 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 97-266 |
| Cow position: | chr12:15414714-15414882 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 97-266 |
| Cow position: | chr12:24639785-24639620 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 97-266 |
| Cow position: | chr12:25814314-25814138 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 97-266 |
| Cow position: | chr12:31841727-31841554 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 97-266 |
| Cow position: | chr12:43583152-43582987 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 27 |
| Conread position: | 99-283 |
| Cow position: | chr12:4801508-4801334 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 101-244 |
| Cow position: | chr12:36241234-36241379 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 102-250 |
| Cow position: | chr12:47267156-47267308 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 102-266 |
| Cow position: | chr12:15389222-15389056 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 104-264 |
| Cow position: | chr12:24181293-24181134 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 104-266 |
| Cow position: | chr12:23939369-23939208 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 104 |
| Conread position: | 104-266 |
| Cow position: | chr12:44542413-44542251 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 105-238 |
| Cow position: | chr12:10833983-10834120 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 105-253 |
| Cow position: | chr12:31532260-31532406 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 105-253 |
| Cow position: | chr12:41220864-41221011 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 105-263 |
| Cow position: | chr12:6465376-6465527 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 150, 61 |
| Conread position: | 105-263 |
| Cow position: | chr12:15122474-15122314 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 105-282 |
| Cow position: | chr12:38552342-38552163 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 106-266 |
| Cow position: | chr12:42180980-42181144 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 107-268 |
| Cow position: | chr12:43352084-43351917 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 107-273 |
| Cow position: | chr12:18130658-18130495 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 109-253 |
| Cow position: | chr12:12532346-12532493 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 109-266 |
| Cow position: | chr12:9514513-9514346 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 112-247 |
| Cow position: | chr12:17744722-17744860 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 115-266 |
| Cow position: | chr12:4866953-4866802 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 122-253 |
| Cow position: | chr12:11068546-11068416 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 125-266 |
| Cow position: | chr12:11106449-11106596 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 132-266 |
| Cow position: | chr12:42254791-42254652 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 144-272 |
| Cow position: | chr12:7299351-7299481 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 159-266 |
| Cow position: | chr12:25441733-25441627 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 160-283 |
| Cow position: | chr12:15176945-15177068 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 162-266 |
| Cow position: | chr12:15163228-15163124 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.