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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010088C10.5
        

               
Conread position:
               
2-266
               

               
Cow position:
               
chr24:11036571-11036836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
19-267
               

               
Cow position:
               
chr24:16995123-16994879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
33-266
               

               
Cow position:
               
chr24:35310962-35310724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
41-238
               

               
Cow position:
               
chr24:2358959-2359155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
46-266
               

               
Cow position:
               
chr24:18541232-18541451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
27, 137
               

               
Conread position:
               
48-266
               

               
Cow position:
               
chr24:5447046-5447269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
50-266
               

               
Cow position:
               
chr24:25142834-25142608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
50-266
               

               
Cow position:
               
chr24:44775957-44776178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
53-232
               

               
Cow position:
               
chr24:28303147-28303322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
58-266
               

               
Cow position:
               
chr24:20323288-20323503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
59-266
               

               
Cow position:
               
chr24:22567313-22567102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
60-251
               

               
Cow position:
               
chr24:21519639-21519439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
61-253
               

               
Cow position:
               
chr24:8677031-8676835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
61-253
               

               
Cow position:
               
chr24:21656618-21656418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
61-253
               

               
Cow position:
               
chr24:27149594-27149395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
62-266
               

               
Cow position:
               
chr24:42194542-42194741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
63-263
               

               
Cow position:
               
chr24:18702606-18702400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
63-266
               

               
Cow position:
               
chr24:13626498-13626282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
63-266
               

               
Cow position:
               
chr24:18484784-18484995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
7, 141
               

               
Conread position:
               
63-266
               

               
Cow position:
               
chr24:19769076-19768865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
63-270
               

               
Cow position:
               
chr24:18750914-18750702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
104, 5
               

               
Conread position:
               
64-266
               

               
Cow position:
               
chr24:13888910-13888701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
64-266
               

               
Cow position:
               
chr24:17689403-17689612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
64-266
               

               
Cow position:
               
chr24:40055309-40055512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
65-265
               

               
Cow position:
               
chr24:32429559-32429765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
65-266
               

               
Cow position:
               
chr24:43499865-43499657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
66-266
               

               
Cow position:
               
chr24:36303106-36303318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
66-271
               

               
Cow position:
               
chr24:11028485-11028695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
67-264
               

               
Cow position:
               
chr24:37823724-37823528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
68-251
               

               
Cow position:
               
chr24:7275898-7275717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
68-259
               

               
Cow position:
               
chr24:1269976-1269788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
187, 25
               

               
Conread position:
               
68-266
               

               
Cow position:
               
chr24:22420163-22419959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
68-266
               

               
Cow position:
               
chr24:26569659-26569456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
68-276
               

               
Cow position:
               
chr24:28700243-28700040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
70-196
               

               
Cow position:
               
chr24:29538113-29538244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
70-203
               

               
Cow position:
               
chr24:28566141-28566272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
70-218
               

               
Cow position:
               
chr24:35210256-35210101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
70-238
               

               
Cow position:
               
chr24:3404815-3404645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
70-245
               

               
Cow position:
               
chr24:6488404-6488228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
70-252
               

               
Cow position:
               
chr24:11266967-11266779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
27, 165
               

               
Conread position:
               
70-253
               

               
Cow position:
               
chr24:18405080-18405269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
70-253
               

               
Cow position:
               
chr24:24490827-24491005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
70-259
               

               
Cow position:
               
chr24:21606477-21606671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
70-264
               

               
Cow position:
               
chr24:18021071-18021271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
70-265
               

               
Cow position:
               
chr24:14550988-14550794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
105, 76
               

               
Conread position:
               
70-265
               

               
Cow position:
               
chr24:39523251-39523449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
70-266
               

               
Cow position:
               
chr24:5651808-5651995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
70-266
               

               
Cow position:
               
chr24:18730547-18730343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
70-266
               

               
Cow position:
               
chr24:19599108-19598904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
70-266
               

               
Cow position:
               
chr24:23863424-23863630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
70-266
               

               
Cow position:
               
chr24:29677710-29677917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
70-266
               

               
Cow position:
               
chr24:36286766-36286568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
70-271
               

               
Cow position:
               
chr24:27323750-27323552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
70-276
               

               
Cow position:
               
chr24:34273016-34272799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
70-282
               

               
Cow position:
               
chr24:20017227-20017446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
71-217
               

               
Cow position:
               
chr24:7917181-7917334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
71-248
               

               
Cow position:
               
chr24:27040245-27040064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
71-264
               

               
Cow position:
               
chr24:21834768-21834958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
71-265
               

               
Cow position:
               
chr24:28722076-28721888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
71-266
               

               
Cow position:
               
chr24:3656166-3656367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
71-266
               

               
Cow position:
               
chr24:32609846-32609646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 124
               

               
Conread position:
               
72-249
               

               
Cow position:
               
chr24:36554505-36554682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-266
               

               
Cow position:
               
chr24:256214-256025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
72-266
               

               
Cow position:
               
chr24:5632835-5633032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
72-266
               

               
Cow position:
               
chr24:19465712-19465918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 133
               

               
Conread position:
               
72-266
               

               
Cow position:
               
chr24:19801037-19800846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 158
               

               
Conread position:
               
72-266
               

               
Cow position:
               
chr24:23046698-23046899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-266
               

               
Cow position:
               
chr24:39903811-39904005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
33, 157
               

               
Conread position:
               
72-271
               

               
Cow position:
               
chr24:6700159-6700364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
73-249
               

               
Cow position:
               
chr24:28788053-28787869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
73-251
               

               
Cow position:
               
chr24:35335279-35335105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
73-252
               

               
Cow position:
               
chr24:37651918-37651738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
73-253
               

               
Cow position:
               
chr24:26588415-26588232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
73-254
               

               
Cow position:
               
chr24:38478198-38478381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 128
               

               
Conread position:
               
73-264
               

               
Cow position:
               
chr24:885252-885441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
73-266
               

               
Cow position:
               
chr24:352407-352607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 172
               

               
Conread position:
               
73-266
               

               
Cow position:
               
chr24:10300273-10300075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
73-266
               

               
Cow position:
               
chr24:18137102-18137303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
73-266
               

               
Cow position:
               
chr24:32978980-32979169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
73-270
               

               
Cow position:
               
chr24:39304717-39304926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
73-271
               

               
Cow position:
               
chr24:40811863-40811668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
176, 44
               

               
Conread position:
               
73-284
               

               
Cow position:
               
chr24:4634968-4635189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
74-253
               

               
Cow position:
               
chr24:18811026-18810843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
74-254
               

               
Cow position:
               
chr24:28255869-28256048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
104, 97
               

               
Conread position:
               
74-264
               

               
Cow position:
               
chr24:11735877-11736070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 31
               

               
Conread position:
               
74-266
               

               
Cow position:
               
chr24:22647139-22647342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
74-266
               

               
Cow position:
               
chr24:44896236-44896037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
75-254
               

               
Cow position:
               
chr24:26808784-26808602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
76-240
               

               
Cow position:
               
chr24:27791552-27791710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
76-246
               

               
Cow position:
               
chr24:35365513-35365689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
76-265
               

               
Cow position:
               
chr24:27202271-27202088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
76-266
               

               
Cow position:
               
chr24:32890853-32891045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
76-271
               

               
Cow position:
               
chr24:250341-250544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
77-221
               

               
Cow position:
               
chr24:31160856-31160995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
139, 24
               

               
Conread position:
               
77-235
               

               
Cow position:
               
chr24:43027033-43027197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 47
               

               
Conread position:
               
77-238
               

               
Cow position:
               
chr24:40592902-40592744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
77-242
               

               
Cow position:
               
chr24:17178799-17178626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
77-251
               

               
Cow position:
               
chr24:28510982-28510811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 117
               

               
Conread position:
               
77-253
               

               
Cow position:
               
chr24:29984798-29984972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
77-260
               

               
Cow position:
               
chr24:30236063-30235874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 110
               

               
Conread position:
               
77-264
               

               
Cow position:
               
chr24:27844344-27844527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
77-266
               

               
Cow position:
               
chr24:6007981-6008171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
77-266
               

               
Cow position:
               
chr24:11155472-11155667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
77-266
               

               
Cow position:
               
chr24:17308947-17309138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 174
               

               
Conread position:
               
77-266
               

               
Cow position:
               
chr24:25970894-25971075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
77-266
               

               
Cow position:
               
chr24:26928749-26928945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
78-232
               

               
Cow position:
               
chr24:30483753-30483908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
78-251
               

               
Cow position:
               
chr24:230471-230297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
78-253
               

               
Cow position:
               
chr24:34301847-34302026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
78-263
               

               
Cow position:
               
chr24:6677823-6677648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
78-263
               

               
Cow position:
               
chr24:19187122-19186939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
78-264
               

               
Cow position:
               
chr24:7757960-7757773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
78-266
               

               
Cow position:
               
chr24:184416-184600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
78-266
               

               
Cow position:
               
chr24:2261860-2261666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
78-266
               

               
Cow position:
               
chr24:16641104-16640908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
78-274
               

               
Cow position:
               
chr24:40025190-40025386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
79-265
               

               
Cow position:
               
chr24:15693212-15693018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
79-266
               

               
Cow position:
               
chr24:11836212-11836405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
79-266
               

               
Cow position:
               
chr24:27906628-27906437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
79-270
               

               
Cow position:
               
chr24:27719341-27719534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
79-270
               

               
Cow position:
               
chr24:39910840-39911038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 132
               

               
Conread position:
               
80-253
               

               
Cow position:
               
chr24:28234229-28234054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
80-266
               

               
Cow position:
               
chr24:162195-162002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
80-266
               

               
Cow position:
               
chr24:27553288-27553094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
81-249
               

               
Cow position:
               
chr24:26880939-26880768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
81-295
               

               
Cow position:
               
chr24:19624052-19623824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
82-254
               

               
Cow position:
               
chr24:22194597-22194430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
82-266
               

               
Cow position:
               
chr24:11840370-11840186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
82-266
               

               
Cow position:
               
chr24:19000230-19000046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 124
               

               
Conread position:
               
82-266
               

               
Cow position:
               
chr24:30229660-30229472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
82-274
               

               
Cow position:
               
chr24:2992692-2992889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
83-266
               

               
Cow position:
               
chr24:16645132-16645321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
83-266
               

               
Cow position:
               
chr24:27219903-27220091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
84-253
               

               
Cow position:
               
chr24:34390456-34390288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
84-265
               

               
Cow position:
               
chr24:27279687-27279516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
84-266
               

               
Cow position:
               
chr24:9300814-9300626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 123
               

               
Conread position:
               
84-266
               

               
Cow position:
               
chr24:37252342-37252156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
84-270
               

               
Cow position:
               
chr24:27810333-27810153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
85-246
               

               
Cow position:
               
chr24:43445827-43445995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
85-247
               

               
Cow position:
               
chr24:42862808-42862641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 132
               

               
Conread position:
               
85-266
               

               
Cow position:
               
chr24:5152709-5152522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
85-266
               

               
Cow position:
               
chr24:12121082-12120895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
85-266
               

               
Cow position:
               
chr24:29587184-29586999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
85-274
               

               
Cow position:
               
chr24:19535069-19535265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
86-253
               

               
Cow position:
               
chr24:31383291-31383128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
86-264
               

               
Cow position:
               
chr24:20364234-20364409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
86-266
               

               
Cow position:
               
chr24:7914191-7914005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
86-266
               

               
Cow position:
               
chr24:13586808-13586993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
86-266
               

               
Cow position:
               
chr24:19730965-19730778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
86-266
               

               
Cow position:
               
chr24:21715167-21715352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
86-266
               

               
Cow position:
               
chr24:22079645-22079462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr24:6739992-6740185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 133
               

               
Conread position:
               
87-244
               

               
Cow position:
               
chr24:16303502-16303656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
87-266
               

               
Cow position:
               
chr24:15557162-15557343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
88-258
               

               
Cow position:
               
chr24:39914754-39914587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
164, 78
               

               
Conread position:
               
88-261
               

               
Cow position:
               
chr24:25947679-25947858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr24:44987190-44987380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
90-253
               

               
Cow position:
               
chr24:41423773-41423615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
93-233
               

               
Cow position:
               
chr24:41925991-41925854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
93-235
               

               
Cow position:
               
chr24:19763353-19763501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
93-242
               

               
Cow position:
               
chr24:38693702-38693856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
93-245
               

               
Cow position:
               
chr24:38427935-38428093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
93-246
               

               
Cow position:
               
chr24:38006537-38006699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
93-250
               

               
Cow position:
               
chr24:28063125-28062963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
93-252
               

               
Cow position:
               
chr24:7777459-7777616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
93-253
               

               
Cow position:
               
chr24:23666950-23667110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 90
               

               
Conread position:
               
93-253
               

               
Cow position:
               
chr24:37974808-37974969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
93-253
               

               
Cow position:
               
chr24:41980485-41980649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
93-256
               

               
Cow position:
               
chr24:27412940-27413102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 104
               

               
Conread position:
               
93-261
               

               
Cow position:
               
chr24:33372721-33372555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
160, 78
               

               
Conread position:
               
93-262
               

               
Cow position:
               
chr24:34006031-34006206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
93-264
               

               
Cow position:
               
chr24:33098297-33098472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
93-265
               

               
Cow position:
               
chr24:390275-390103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
93-265
               

               
Cow position:
               
chr24:21524240-21524064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
93-265
               

               
Cow position:
               
chr24:24532346-24532173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
93-266
               

               
Cow position:
               
chr24:3494056-3493883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
93-266
               

               
Cow position:
               
chr24:18755935-18755756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
93-266
               

               
Cow position:
               
chr24:20801170-20801347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
93-266
               

               
Cow position:
               
chr24:25194441-25194264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 94
               

               
Conread position:
               
93-266
               

               
Cow position:
               
chr24:26001562-26001386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
93-266
               

               
Cow position:
               
chr24:27066405-27066229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
93-266
               

               
Cow position:
               
chr24:27203628-27203459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
93-266
               

               
Cow position:
               
chr24:28600263-28600436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
93-266
               

               
Cow position:
               
chr24:43349472-43349637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
93-270
               

               
Cow position:
               
chr24:16510146-16509972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
93-272
               

               
Cow position:
               
chr24:42984570-42984384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
94-253
               

               
Cow position:
               
chr24:41565926-41566087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
94-266
               

               
Cow position:
               
chr24:18874646-18874822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
69, 112
               

               
Conread position:
               
95-253
               

               
Cow position:
               
chr24:5360884-5360728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
95-266
               

               
Cow position:
               
chr24:33944579-33944400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
97-254
               

               
Cow position:
               
chr24:23000172-23000024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
97-263
               

               
Cow position:
               
chr24:30313858-30314024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
100, 117
               

               
Conread position:
               
97-264
               

               
Cow position:
               
chr24:27713239-27713404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
97-266
               

               
Cow position:
               
chr24:14899912-14899755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
97-266
               

               
Cow position:
               
chr24:17104401-17104571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
99-266
               

               
Cow position:
               
chr24:19637756-19637582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
101-282
               

               
Cow position:
               
chr24:27271096-27270910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
63, 180
               

               
Conread position:
               
102-279
               

               
Cow position:
               
chr24:41244677-41244497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 44
               

               
Conread position:
               
103-279
               

               
Cow position:
               
chr24:17060053-17060230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
150, 53
               

               
Conread position:
               
105-265
               

               
Cow position:
               
chr24:17294032-17294197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
105-266
               

               
Cow position:
               
chr24:23556174-23556339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
105-283
               

               
Cow position:
               
chr24:21102562-21102390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
106-266
               

               
Cow position:
               
chr24:21251880-21252036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
106-266
               

               
Cow position:
               
chr24:35632143-35631976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
107-253
               

               
Cow position:
               
chr24:31816736-31816590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
107-253
               

               
Cow position:
               
chr24:41916418-41916271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
107-266
               

               
Cow position:
               
chr24:32230343-32230507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
108-264
               

               
Cow position:
               
chr24:15288987-15288828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
109-266
               

               
Cow position:
               
chr24:44040852-44041006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
129-266
               

               
Cow position:
               
chr24:33311219-33311357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
159-266
               

               
Cow position:
               
chr24:22235573-22235466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
160-266
               

               
Cow position:
               
chr24:29014071-29013965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
160-266
               

               
Cow position:
               
chr24:34008468-34008574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
162-274
               

               
Cow position:
               
chr24:7113325-7113213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.