Cow genome map

Conread name: Ss1.1-Thy1-THY010088C10.5

Conread position: 47-265
Cow position: chr29:25104839-25104615 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 59

Conread position: 48-266
Cow position: chr29:2744028-2744246 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 45

Conread position: 52-243
Cow position: chr29:22720407-22720598 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 16

Conread position: 54-244
Cow position: chr29:40112618-40112425 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 10

Conread position: 55-273
Cow position: chr29:35189847-35189621 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 57-209
Cow position: chr29:34483392-34483549 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 106, 34

Conread position: 57-267
Cow position: chr29:14375647-14375861 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 7

Conread position: 58-266
Cow position: chr29:4647977-4648188 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 21, 72

Conread position: 60-251
Cow position: chr29:41223399-41223201 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 13

Conread position: 61-252
Cow position: chr29:32894488-32894298 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 100

Conread position: 61-253
Cow position: chr29:38732384-38732187 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 109, 32

Conread position: 62-273
Cow position: chr29:22018955-22019174 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 63-266
Cow position: chr29:11489366-11489559 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 95

Conread position: 63-266
Cow position: chr29:36249269-36249058 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 138

Conread position: 63-266
Cow position: chr29:42630345-42630142 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 7

Conread position: 64-249
Cow position: chr29:20770570-20770382 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 77, 29

Conread position: 64-266
Cow position: chr29:8163597-8163808 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 64-266
Cow position: chr29:25793372-25793167 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 67

Conread position: 64-266
Cow position: chr29:33511498-33511708 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 64-266
Cow position: chr29:34297343-34297547 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 13

Conread position: 64-266
Cow position: chr29:34359602-34359800 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 65-238
Cow position: chr29:24119271-24119451 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 66-247
Cow position: chr29:30294649-30294833 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 97, 25

Conread position: 66-253
Cow position: chr29:13064079-13063893 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 63

Conread position: 66-266
Cow position: chr29:16290950-16290747 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 6, 86

Conread position: 67-249
Cow position: chr29:24660899-24660723 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 12, 26

Conread position: 67-266
Cow position: chr29:12222395-12222198 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 106

Conread position: 67-266
Cow position: chr29:21196427-21196628 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 67-266
Cow position: chr29:31489550-31489340 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 67-274
Cow position: chr29:10203992-10203785 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 26

Conread position: 68-218
Cow position: chr29:20644141-20643984 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 51

Conread position: 68-252
Cow position: chr29:4121077-4120889 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 102, 5

Conread position: 68-266
Cow position: chr29:14577080-14576880 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 68-266
Cow position: chr29:22068519-22068719 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 13

Conread position: 68-266
Cow position: chr29:35677315-35677522 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 68-279
Cow position: chr29:11685393-11685172 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 69-254
Cow position: chr29:2219611-2219420 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 69-259
Cow position: chr29:27726914-27726730 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 69-266
Cow position: chr29:16657917-16657720 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 9, 123

Conread position: 70-239
Cow position: chr29:42887192-42887017 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 70-253
Cow position: chr29:14828006-14828194 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 43

Conread position: 70-263
Cow position: chr29:25432672-25432477 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 21

Conread position: 70-266
Cow position: chr29:21018521-21018725 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 70-266
Cow position: chr29:23874684-23874481 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 70-266
Cow position: chr29:34675785-34675988 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 70-266
Cow position: chr29:41531074-41530871 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 114

Conread position: 70-267
Cow position: chr29:16735448-16735244 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 70-270
Cow position: chr29:1959734-1959929 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 70-274
Cow position: chr29:30123281-30123490 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 191

Conread position: 71-251
Cow position: chr29:23678922-23678745 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 101

Conread position: 71-253
Cow position: chr29:22729789-22729601 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 166

Conread position: 71-254
Cow position: chr29:2414535-2414719 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 39

Conread position: 71-266
Cow position: chr29:8798790-8798994 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 38

Conread position: 71-266
Cow position: chr29:22534183-22533982 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 9

Conread position: 71-266
Cow position: chr29:23845059-23844859 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 6

Conread position: 72-242
Cow position: chr29:41094335-41094162 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 52

Conread position: 72-253
Cow position: chr29:9709912-9709729 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 72-253
Cow position: chr29:34356190-34356002 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 72-253
Cow position: chr29:40117784-40117606 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 72-265
Cow position: chr29:4327804-4327615 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 32

Conread position: 72-266
Cow position: chr29:26211273-26211073 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 25, 119

Conread position: 73-250
Cow position: chr29:28087893-28087707 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 73-252
Cow position: chr29:6517447-6517264 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 141

Conread position: 73-253
Cow position: chr29:37293247-37293070 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 100

Conread position: 73-254
Cow position: chr29:23637455-23637645 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 73-264
Cow position: chr29:30088833-30089032 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 170

Conread position: 73-266
Cow position: chr29:5046870-5046674 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 18

Conread position: 73-266
Cow position: chr29:14746997-14746801 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 73-266
Cow position: chr29:31929205-31929010 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 82

Conread position: 73-266
Cow position: chr29:35292301-35292113 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 177, 18

Conread position: 73-266
Cow position: chr29:44684314-44684120 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 101, 8

Conread position: 73-268
Cow position: chr29:29769136-29769337 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 74-253
Cow position: chr29:12025265-12025439 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 17

Conread position: 74-266
Cow position: chr29:1933353-1933550 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 63

Conread position: 74-266
Cow position: chr29:18556882-18556693 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 75-266
Cow position: chr29:15947385-15947188 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 92, 0

Conread position: 75-294
Cow position: chr29:41112674-41112888 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 76-252
Cow position: chr29:4070839-4070659 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 76-253
Cow position: chr29:25092320-25092140 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 76-266
Cow position: chr29:3538470-3538655 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 76-266
Cow position: chr29:5520269-5520464 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 76-266
Cow position: chr29:16200260-16200457 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 76-266
Cow position: chr29:22735233-22735427 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 77-250
Cow position: chr29:35458555-35458734 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 172

Conread position: 77-253
Cow position: chr29:396617-396440 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 77-253
Cow position: chr29:936419-936241 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 77-253
Cow position: chr29:34744414-34744591 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 51

Conread position: 77-264
Cow position: chr29:20626783-20626590 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 16

Conread position: 77-264
Cow position: chr29:22613634-22613453 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 77-266
Cow position: chr29:8634868-8634675 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 71

Conread position: 77-266
Cow position: chr29:31982035-31981852 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 77-266
Cow position: chr29:37771672-37771865 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 14

Conread position: 77-266
Cow position: chr29:38754723-38754918 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 78-253
Cow position: chr29:7414706-7414535 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 15

Conread position: 78-263
Cow position: chr29:29308369-29308547 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 79-216
Cow position: chr29:35485789-35485652 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 79-262
Cow position: chr29:684966-685148 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 82, 14

Conread position: 79-265
Cow position: chr29:20685383-20685191 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 80-250
Cow position: chr29:24605107-24604933 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 81-207
Cow position: chr29:31835477-31835352 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 81-230
Cow position: chr29:4741178-4741334 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 81-261
Cow position: chr29:33321559-33321373 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 81-266
Cow position: chr29:28420968-28420777 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 179

Conread position: 81-266
Cow position: chr29:28813762-28813953 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 81-266
Cow position: chr29:38396574-38396381 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 77, 60

Conread position: 82-217
Cow position: chr29:22184167-22184034 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 82-266
Cow position: chr29:5953647-5953838 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 82-266
Cow position: chr29:17436958-17436772 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 57

Conread position: 82-266
Cow position: chr29:26017291-26017481 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 82-266
Cow position: chr29:31934589-31934400 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 83-266
Cow position: chr29:3685312-3685498 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 84

Conread position: 84-236
Cow position: chr29:35281679-35281515 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 84-266
Cow position: chr29:9078323-9078508 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 54

Conread position: 84-266
Cow position: chr29:11894909-11894719 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 84-266
Cow position: chr29:26602407-26602220 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 85-253
Cow position: chr29:3826173-3826006 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 41

Conread position: 85-266
Cow position: chr29:16609956-16609769 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 85-266
Cow position: chr29:30827614-30827427 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 86-250
Cow position: chr29:7040664-7040835 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 68, 7

Conread position: 86-252
Cow position: chr29:36531070-36530902 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 7

Conread position: 86-253
Cow position: chr29:32656642-32656467 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 86-264
Cow position: chr29:27926979-27926797 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 147

Conread position: 86-266
Cow position: chr29:501406-501218 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 52

Conread position: 86-266
Cow position: chr29:4492638-4492457 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 86-266
Cow position: chr29:16279182-16279009 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 133, 108

Conread position: 86-266
Cow position: chr29:32733507-32733320 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 86-275
Cow position: chr29:37618514-37618317 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 87-264
Cow position: chr29:27911796-27911614 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 80, 147

Conread position: 87-266
Cow position: chr29:22576973-22577158 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 88-250
Cow position: chr29:30227077-30227244 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 139

Conread position: 88-266
Cow position: chr29:19420417-19420592 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 92-253
Cow position: chr29:28195334-28195487 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 75

Conread position: 93-238
Cow position: chr29:8841251-8841396 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 93-244
Cow position: chr29:36357326-36357169 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 93-251
Cow position: chr29:9378833-9378673 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 93-253
Cow position: chr29:17110151-17109991 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 29

Conread position: 93-253
Cow position: chr29:19176717-19176879 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 59

Conread position: 93-253
Cow position: chr29:22028763-22028921 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 93-253
Cow position: chr29:25737221-25737380 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 68, 31

Conread position: 93-253
Cow position: chr29:28979318-28979468 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 93-253
Cow position: chr29:29057377-29057209 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 93-254
Cow position: chr29:4484295-4484129 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 93-259
Cow position: chr29:19949503-19949334 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 93-264
Cow position: chr29:5408944-5409118 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 104

Conread position: 93-264
Cow position: chr29:19363906-19363734 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 156

Conread position: 93-264
Cow position: chr29:26540342-26540517 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 43

Conread position: 93-264
Cow position: chr29:36781112-36781281 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 93-265
Cow position: chr29:18878284-18878459 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 25

Conread position: 93-265
Cow position: chr29:32655896-32656070 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 143, 0

Conread position: 93-266
Cow position: chr29:2056258-2056082 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 93-266
Cow position: chr29:17297336-17297157 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 93-266
Cow position: chr29:18449940-18450117 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 94

Conread position: 93-266
Cow position: chr29:19187224-19187047 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 93-266
Cow position: chr29:20167621-20167445 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 74, 37

Conread position: 93-266
Cow position: chr29:23698168-23697998 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 160, 28

Conread position: 93-266
Cow position: chr29:24293068-24292889 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 44

Conread position: 93-266
Cow position: chr29:31786872-31786696 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 44

Conread position: 93-266
Cow position: chr29:35084025-35084201 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 71, 41

Conread position: 93-266
Cow position: chr29:35259179-35259006 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 77, 28

Conread position: 93-268
Cow position: chr29:26411272-26411450 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 21

Conread position: 93-270
Cow position: chr29:35501467-35501637 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 55

Conread position: 93-272
Cow position: chr29:10994709-10994527 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 93-275
Cow position: chr29:38858014-38858201 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 44

Conread position: 94-233
Cow position: chr29:18577639-18577500 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 94-242
Cow position: chr29:23734889-23735043 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 94-258
Cow position: chr29:33143159-33143325 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 94-266
Cow position: chr29:17222613-17222434 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 51

Conread position: 94-266
Cow position: chr29:23812851-23813018 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 36

Conread position: 94-274
Cow position: chr29:16561577-16561757 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 118

Conread position: 94-276
Cow position: chr29:4441008-4441193 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 81, 123

Conread position: 95-238
Cow position: chr29:1011397-1011540 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 103

Conread position: 95-252
Cow position: chr29:40763500-40763659 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 95-254
Cow position: chr29:6756180-6756021 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 95-263
Cow position: chr29:42405145-42404971 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 95-266
Cow position: chr29:24187867-24188044 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 95-266
Cow position: chr29:34745465-34745637 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 36

Conread position: 95-268
Cow position: chr29:7955792-7955971 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 133

Conread position: 95-274
Cow position: chr29:23142136-23142321 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 0

Conread position: 96-266
Cow position: chr29:3293138-3292969 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 93, 0

Conread position: 96-266
Cow position: chr29:23819189-23819369 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 97-253
Cow position: chr29:4085490-4085343 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 97-253
Cow position: chr29:11081200-11081362 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 97-254
Cow position: chr29:41422715-41422878 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 97-266
Cow position: chr29:26539425-26539256 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 97-268
Cow position: chr29:43088500-43088330 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 68, 89

Conread position: 98-266
Cow position: chr29:26259669-26259505 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 98-274
Cow position: chr29:30441132-30440950 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 115

Conread position: 99-250
Cow position: chr29:10191853-10192002 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 140, 62

Conread position: 99-262
Cow position: chr29:22652511-22652348 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 103-253
Cow position: chr29:40791485-40791337 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 104-264
Cow position: chr29:17804717-17804558 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 104-265
Cow position: chr29:23913210-23913371 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 104-266
Cow position: chr29:4423263-4423418 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 107-254
Cow position: chr29:22128048-22127903 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 107-266
Cow position: chr29:24365713-24365875 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 119

Conread position: 107-266
Cow position: chr29:43544421-43544582 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 108-271
Cow position: chr29:415187-415030 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 144, 49

Conread position: 110-294
Cow position: chr29:23825031-23825219 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 92

Conread position: 111-267
Cow position: chr29:38582150-38581988 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 113-253
Cow position: chr29:28257320-28257175 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 120-273
Cow position: chr29:45589429-45589574 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 124-266
Cow position: chr29:21443169-21443317 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 163-265
Cow position: chr29:17409459-17409357 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.