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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010096F02.5
        

               
Conread position:
               
23-728
               

               
Cow position:
               
chr24:36780225-36780938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
37-521
               

               
Cow position:
               
chr24:6160584-6160102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
40-452
               

               
Cow position:
               
chr24:30768221-30768639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
47-391
               

               
Cow position:
               
chr24:6665968-6665611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
47-424
               

               
Cow position:
               
chr24:22975649-22976037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
47-591
               

               
Cow position:
               
chr24:13304661-13304114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
48-354
               

               
Cow position:
               
chr24:33938695-33939011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
48-356
               

               
Cow position:
               
chr24:13042152-13041833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
48-356
               

               
Cow position:
               
chr24:33639657-33639339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
48-356
               

               
Cow position:
               
chr24:43906699-43907014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
48-386
               

               
Cow position:
               
chr24:30262832-30263190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
48-390
               

               
Cow position:
               
chr24:25269488-25269118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
48-452
               

               
Cow position:
               
chr24:13178905-13178487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
48-452
               

               
Cow position:
               
chr24:39217115-39216698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
48-462
               

               
Cow position:
               
chr24:5849901-5849462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
48-469
               

               
Cow position:
               
chr24:6020238-6019805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
48-475
               

               
Cow position:
               
chr24:14124600-14125041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
48-544
               

               
Cow position:
               
chr24:1841030-1840524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
48-700
               

               
Cow position:
               
chr24:36174265-36173613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 109
               

               
Conread position:
               
48-726
               

               
Cow position:
               
chr24:40300682-40301351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
49-255
               

               
Cow position:
               
chr24:18234616-18234834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-255
               

               
Cow position:
               
chr24:18399604-18399389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-259
               

               
Cow position:
               
chr24:35815642-35815420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-271
               

               
Cow position:
               
chr24:13890801-13890567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr24:14760740-14760977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr24:26795258-26795495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr24:40789753-40789516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-329
               

               
Cow position:
               
chr24:18740527-18740235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-334
               

               
Cow position:
               
chr24:4649436-4649136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-339
               

               
Cow position:
               
chr24:27153811-27153508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-353
               

               
Cow position:
               
chr24:17188430-17188115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-353
               

               
Cow position:
               
chr24:26412888-26413205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:3515686-3515375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:3851437-3851754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:6067505-6067190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:9616448-9616144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:12518655-12518973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:12696282-12695964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:13236108-13236428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 171
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:15674779-15674474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:16654163-16653844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:22047232-22046914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:35877419-35877101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:36308418-36308736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr24:38296898-38297216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-362
               

               
Cow position:
               
chr24:9901213-9901536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
49-383
               

               
Cow position:
               
chr24:13319613-13319270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-399
               

               
Cow position:
               
chr24:38479434-38479095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
49-428
               

               
Cow position:
               
chr24:11311683-11311288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr24:8754357-8754758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr24:12577522-12577917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr24:13492337-13492740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr24:27760363-27760764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr24:34271030-34271432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
69, 306
               

               
Conread position:
               
49-442
               

               
Cow position:
               
chr24:15084421-15084830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-447
               

               
Cow position:
               
chr24:7782289-7781877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-447
               

               
Cow position:
               
chr24:13185852-13185443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-447
               

               
Cow position:
               
chr24:25372944-25373356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-451
               

               
Cow position:
               
chr24:5990346-5989929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:192928-193342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:207164-206750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:3794324-3794732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 135
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:5929620-5930036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:6325530-6325113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:6436304-6436718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:8331656-8331250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:11104310-11103889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:15296957-15297373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:15880928-15881344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:16610938-16610522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:17161136-17160719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:17720583-17720169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:20221031-20221444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:20604590-20605008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 351
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:21211076-21210660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:22795397-22795810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:24818754-24818334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:25710197-25709765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:29083817-29083399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:31067213-31066800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr24:40381996-40381581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr24:6019129-6018710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr24:8776817-8777235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr24:9044855-9044436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr24:9365959-9365540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr24:10035202-10034783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr24:10655454-10655872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr24:14353187-14353606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr24:17455889-17456308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr24:28833020-28832601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr24:29097631-29097213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr24:36326199-36326618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr24:39253766-39254185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-469
               

               
Cow position:
               
chr24:11152191-11152623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-469
               

               
Cow position:
               
chr24:12377275-12376842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-469
               

               
Cow position:
               
chr24:14146033-14145611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
49-469
               

               
Cow position:
               
chr24:14249741-14249307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-469
               

               
Cow position:
               
chr24:27763314-27763731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
49-469
               

               
Cow position:
               
chr24:35793690-35794126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-472
               

               
Cow position:
               
chr24:14530875-14531303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
49-475
               

               
Cow position:
               
chr24:12293534-12293974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
69, 351
               

               
Conread position:
               
49-481
               

               
Cow position:
               
chr24:599851-599405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-481
               

               
Cow position:
               
chr24:15026601-15026153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr24:11080941-11080509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 21
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr24:12447333-12447765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 21
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr24:18113298-18113744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr24:39067021-39066575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-493
               

               
Cow position:
               
chr24:15810320-15809864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr24:3163312-3163815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr24:4637578-4637077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr24:4666922-4667426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr24:7596721-7596217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr24:7986374-7985869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr24:28494585-28495090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr24:40427850-40427352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr24:42693897-42693392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
50-454
               

               
Cow position:
               
chr24:17251929-17251536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
226, 20
               

               
Conread position:
               
51-231
               

               
Cow position:
               
chr24:31293842-31293660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
51-245
               

               
Cow position:
               
chr24:5682798-5682993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
51-257
               

               
Cow position:
               
chr24:34761351-34761568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
51-274
               

               
Cow position:
               
chr24:13373664-13373429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-274
               

               
Cow position:
               
chr24:16897332-16897093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
51-275
               

               
Cow position:
               
chr24:16962809-16962570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 230
               

               
Conread position:
               
51-318
               

               
Cow position:
               
chr24:16646087-16645813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
51-321
               

               
Cow position:
               
chr24:15372632-15372917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
51-339
               

               
Cow position:
               
chr24:38655582-38655278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
51-350
               

               
Cow position:
               
chr24:31420402-31420714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
51-353
               

               
Cow position:
               
chr24:32405540-32405224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
51-359
               

               
Cow position:
               
chr24:27754205-27754526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
51-362
               

               
Cow position:
               
chr24:12503907-12504228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
51-366
               

               
Cow position:
               
chr24:43506999-43506669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr24:4616233-4615899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
51-378
               

               
Cow position:
               
chr24:36710667-36710994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
51-380
               

               
Cow position:
               
chr24:31308940-31309272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
51-383
               

               
Cow position:
               
chr24:28689229-28689568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
51-385
               

               
Cow position:
               
chr24:15793172-15792824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
51-387
               

               
Cow position:
               
chr24:20283368-20283014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
51-390
               

               
Cow position:
               
chr24:28067273-28067627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
51-390
               

               
Cow position:
               
chr24:45216602-45216241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
51-410
               

               
Cow position:
               
chr24:29845750-29845385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
51-418
               

               
Cow position:
               
chr24:29375852-29376221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-424
               

               
Cow position:
               
chr24:18222651-18222263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-426
               

               
Cow position:
               
chr24:12146746-12146360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
51-428
               

               
Cow position:
               
chr24:8814497-8814096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 182
               

               
Conread position:
               
51-436
               

               
Cow position:
               
chr24:2118714-2119113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
51-436
               

               
Cow position:
               
chr24:17544119-17543726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-436
               

               
Cow position:
               
chr24:19679385-19679784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-439
               

               
Cow position:
               
chr24:22193239-22193640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-448
               

               
Cow position:
               
chr24:35572000-35572407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-452
               

               
Cow position:
               
chr24:6157786-6157366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
51-452
               

               
Cow position:
               
chr24:11215544-11215129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
51-452
               

               
Cow position:
               
chr24:16541331-16540931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr24:11940877-11941292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr24:12090816-12091233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr24:19815570-19815154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr24:19837012-19837426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr24:19886071-19886485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr24:21769962-21770366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr24:29191127-29191534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr24:35823084-35822667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr24:38588622-38589036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-455
               

               
Cow position:
               
chr24:6035336-6034926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-456
               

               
Cow position:
               
chr24:40149554-40149154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
51-460
               

               
Cow position:
               
chr24:33239039-33238611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
51-462
               

               
Cow position:
               
chr24:27270309-27270715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-465
               

               
Cow position:
               
chr24:29360464-29360058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
51-467
               

               
Cow position:
               
chr24:7030636-7030217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
51-469
               

               
Cow position:
               
chr24:39441044-39440614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
51-473
               

               
Cow position:
               
chr24:6154343-6154755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
51-476
               

               
Cow position:
               
chr24:6340546-6340959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
51-480
               

               
Cow position:
               
chr24:27720234-27719805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
51-480
               

               
Cow position:
               
chr24:36722243-36722694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
94, 69
               

               
Conread position:
               
51-481
               

               
Cow position:
               
chr24:17309585-17309165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr24:9550102-9550545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr24:16558170-16557727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr24:30870130-30869697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr24:40466571-40466128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
64, 304
               

               
Conread position:
               
51-491
               

               
Cow position:
               
chr24:29073164-29072702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-504
               

               
Cow position:
               
chr24:39492816-39493267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
51-525
               

               
Cow position:
               
chr24:24137338-24136870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
51-527
               

               
Cow position:
               
chr24:24002491-24002962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-530
               

               
Cow position:
               
chr24:17364138-17363652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
51-530
               

               
Cow position:
               
chr24:27052976-27052498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
51-544
               

               
Cow position:
               
chr24:12701241-12700738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-544
               

               
Cow position:
               
chr24:36555315-36554822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-569
               

               
Cow position:
               
chr24:20024125-20024649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
51-574
               

               
Cow position:
               
chr24:7001555-7001028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-583
               

               
Cow position:
               
chr24:6149546-6150073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
51-602
               

               
Cow position:
               
chr24:43634945-43635495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
51-613
               

               
Cow position:
               
chr24:202120-201557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
51-621
               

               
Cow position:
               
chr24:6141443-6140863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-621
               

               
Cow position:
               
chr24:31323801-31324372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
51-625
               

               
Cow position:
               
chr24:18970990-18970416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-644
               

               
Cow position:
               
chr24:27290390-27290982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
51-644
               

               
Cow position:
               
chr24:39160028-39159439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-697
               

               
Cow position:
               
chr24:18742057-18741402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
51-699
               

               
Cow position:
               
chr24:40129633-40130301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 103
               

               
Conread position:
               
51-705
               

               
Cow position:
               
chr24:17105051-17104401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 183
               

               
Conread position:
               
51-705
               

               
Cow position:
               
chr24:29596293-29595629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-708
               

               
Cow position:
               
chr24:15247107-15246484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-711
               

               
Cow position:
               
chr24:31811701-31812362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-713
               

               
Cow position:
               
chr24:33943915-33944585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
51-713
               

               
Cow position:
               
chr24:35675068-35675710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
51-716
               

               
Cow position:
               
chr24:27905941-27906620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
51-720
               

               
Cow position:
               
chr24:11118800-11119483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
51-723
               

               
Cow position:
               
chr24:27845007-27844344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-726
               

               
Cow position:
               
chr24:9070919-9070249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
51-726
               

               
Cow position:
               
chr24:13625820-13626478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 19
               

               
Conread position:
               
51-726
               

               
Cow position:
               
chr24:32693218-32693912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
51-726
               

               
Cow position:
               
chr24:38814485-38815166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 192
               

               
Conread position:
               
51-727
               

               
Cow position:
               
chr24:5652452-5651815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
51-727
               

               
Cow position:
               
chr24:30484421-30483753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
51-727
               

               
Cow position:
               
chr24:39483015-39483658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 19
               

               
Conread position:
               
51-731
               

               
Cow position:
               
chr24:11839692-11840378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 207
               

               
Conread position:
               
51-732
               

               
Cow position:
               
chr24:11886677-11887350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
52-392
               

               
Cow position:
               
chr24:36715069-36715423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
52-481
               

               
Cow position:
               
chr24:17412260-17412694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
52-481
               

               
Cow position:
               
chr24:40056205-40055776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
52-627
               

               
Cow position:
               
chr24:29064129-29063565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
52-635
               

               
Cow position:
               
chr24:23616209-23616796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
53-356
               

               
Cow position:
               
chr24:37037129-37037445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
53-385
               

               
Cow position:
               
chr24:12348577-12348928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 218
               

               
Conread position:
               
53-454
               

               
Cow position:
               
chr24:40035249-40034836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
53-606
               

               
Cow position:
               
chr24:13819453-13820015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 229
               

               
Conread position:
               
53-635
               

               
Cow position:
               
chr24:24250239-24250822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
53-710
               

               
Cow position:
               
chr24:28062463-28063126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
54-430
               

               
Cow position:
               
chr24:16909145-16909545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
54-522
               

               
Cow position:
               
chr24:18266646-18266174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
54-614
               

               
Cow position:
               
chr24:18025448-18024893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
54-617
               

               
Cow position:
               
chr24:29679790-29679229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
54-728
               

               
Cow position:
               
chr24:28303834-28303171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
55-389
               

               
Cow position:
               
chr24:15666891-15666540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
55-406
               

               
Cow position:
               
chr24:33379572-33379934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
56-459
               

               
Cow position:
               
chr24:39500767-39500348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
57-320
               

               
Cow position:
               
chr24:27484688-27484412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 156
               

               
Conread position:
               
57-377
               

               
Cow position:
               
chr24:28336023-28335683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
82, 148
               

               
Conread position:
               
57-380
               

               
Cow position:
               
chr24:27503067-27502732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 259
               

               
Conread position:
               
57-482
               

               
Cow position:
               
chr24:37142157-37142595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
58-629
               

               
Cow position:
               
chr24:33230188-33230770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
63-356
               

               
Cow position:
               
chr24:13195715-13196004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
63-450
               

               
Cow position:
               
chr24:5607605-5607217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
63-452
               

               
Cow position:
               
chr24:31302542-31302938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
13, 126
               

               
Conread position:
               
63-530
               

               
Cow position:
               
chr24:11064394-11064868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 180
               

               
Conread position:
               
64-331
               

               
Cow position:
               
chr24:13117488-13117769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
64-437
               

               
Cow position:
               
chr24:16267296-16267686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
68, 301
               

               
Conread position:
               
64-473
               

               
Cow position:
               
chr24:27809704-27810131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
64-577
               

               
Cow position:
               
chr24:34564650-34565163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
64-709
               

               
Cow position:
               
chr24:19475644-19476291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
65-436
               

               
Cow position:
               
chr24:18847442-18847808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
67-274
               

               
Cow position:
               
chr24:31382225-31382429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
67-719
               

               
Cow position:
               
chr24:33621958-33621293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 333
               

               
Conread position:
               
69-724
               

               
Cow position:
               
chr24:32609164-32609839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 413
               

               
Conread position:
               
71-724
               

               
Cow position:
               
chr24:27148937-27149573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
72-530
               

               
Cow position:
               
chr24:39219310-39218844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
72-728
               

               
Cow position:
               
chr24:6450064-6450703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 171
               

               
Conread position:
               
80-480
               

               
Cow position:
               
chr24:23034206-23034623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 320
               

               
Conread position:
               
83-393
               

               
Cow position:
               
chr24:34870323-34870008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
88-454
               

               
Cow position:
               
chr24:35795721-35795352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
109-533
               

               
Cow position:
               
chr24:634567-634976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
17, 163
               

               
Conread position:
               
115-476
               

               
Cow position:
               
chr24:25664719-25665071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
122-387
               

               
Cow position:
               
chr24:42862251-42862510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
124-260
               

               
Cow position:
               
chr24:131333-131471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
126-378
               

               
Cow position:
               
chr24:37856739-37856486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
150, 5
               

               
Conread position:
               
128-732
               

               
Cow position:
               
chr24:37650280-37650874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
129-469
               

               
Cow position:
               
chr24:20862357-20862017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
130-452
               

               
Cow position:
               
chr24:33573495-33573171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
146, 257
               

               
Conread position:
               
130-501
               

               
Cow position:
               
chr24:33571604-33571971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
146, 257
               

               
Conread position:
               
133-356
               

               
Cow position:
               
chr24:12448002-12448224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
143, 209
               

               
Conread position:
               
133-469
               

               
Cow position:
               
chr24:11080272-11079933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
143, 254
               

               
Conread position:
               
134-436
               

               
Cow position:
               
chr24:36027575-36027271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
135-493
               

               
Cow position:
               
chr24:9590406-9590047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
136-481
               

               
Cow position:
               
chr24:18257460-18257122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 224
               

               
Conread position:
               
140-431
               

               
Cow position:
               
chr24:6956798-6957080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
133, 72
               

               
Conread position:
               
140-593
               

               
Cow position:
               
chr24:13173541-13173094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
140-705
               

               
Cow position:
               
chr24:28553933-28553401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 196
               

               
Conread position:
               
141-392
               

               
Cow position:
               
chr24:30766489-30766745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
135, 47
               

               
Conread position:
               
141-454
               

               
Cow position:
               
chr24:28221352-28221037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
135, 246
               

               
Conread position:
               
141-476
               

               
Cow position:
               
chr24:27267254-27267581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
142-384
               

               
Cow position:
               
chr24:20157904-20157662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
143, 208
               

               
Conread position:
               
142-482
               

               
Cow position:
               
chr24:11327303-11327648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
135, 10
               

               
Conread position:
               
142-642
               

               
Cow position:
               
chr24:33153404-33153886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 47
               

               
Conread position:
               
142-697
               

               
Cow position:
               
chr24:23556712-23556174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 73
               

               
Conread position:
               
143-428
               

               
Cow position:
               
chr24:1272252-1271961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
143-436
               

               
Cow position:
               
chr24:14320039-14319744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
95, 125
               

               
Conread position:
               
143-452
               

               
Cow position:
               
chr24:15875013-15874702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 199
               

               
Conread position:
               
145-428
               

               
Cow position:
               
chr24:27593551-27593267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
131, 7
               

               
Conread position:
               
145-442
               

               
Cow position:
               
chr24:21104598-21104894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
140, 121
               

               
Conread position:
               
145-452
               

               
Cow position:
               
chr24:6085545-6085854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
131, 242
               

               
Conread position:
               
145-486
               

               
Cow position:
               
chr24:27683817-27683485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 7
               

               
Conread position:
               
145-486
               

               
Cow position:
               
chr24:35568809-35569140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
145-602
               

               
Cow position:
               
chr24:32158647-32158208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
213, 7
               

               
Conread position:
               
146-340
               

               
Cow position:
               
chr24:6080422-6080617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
146-353
               

               
Cow position:
               
chr24:5624603-5624404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
130, 23
               

               
Conread position:
               
146-383
               

               
Cow position:
               
chr24:37975449-37975211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
196, 49
               

               
Conread position:
               
146-422
               

               
Cow position:
               
chr24:32014744-32015024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
146-451
               

               
Cow position:
               
chr24:25706212-25705904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
121, 244
               

               
Conread position:
               
146-462
               

               
Cow position:
               
chr24:6341790-6342116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
146-476
               

               
Cow position:
               
chr24:40346883-40346562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
207, 75
               

               
Conread position:
               
146-544
               

               
Cow position:
               
chr24:12697463-12697067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
130, 241
               

               
Conread position:
               
146-728
               

               
Cow position:
               
chr24:32205176-32204594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 240
               

               
Conread position:
               
147-332
               

               
Cow position:
               
chr24:17980839-17981021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
128, 49
               

               
Conread position:
               
147-656
               

               
Cow position:
               
chr24:14648706-14648236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
149-339
               

               
Cow position:
               
chr24:16844708-16844518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
149-339
               

               
Cow position:
               
chr24:18846629-18846823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 174
               

               
Conread position:
               
149-428
               

               
Cow position:
               
chr24:33730488-33730764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
203, 78
               

               
Conread position:
               
149-466
               

               
Cow position:
               
chr24:27543853-27543540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 235
               

               
Conread position:
               
149-467
               

               
Cow position:
               
chr24:10308901-10309198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
149-586
               

               
Cow position:
               
chr24:41985589-41986048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 128
               

               
Conread position:
               
149-709
               

               
Cow position:
               
chr24:42102993-42103536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 112
               

               
Conread position:
               
149-711
               

               
Cow position:
               
chr24:33372185-33372723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 64
               

               
Conread position:
               
150-336
               

               
Cow position:
               
chr24:27732532-27732343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
151-354
               

               
Cow position:
               
chr24:8021200-8021404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
151-592
               

               
Cow position:
               
chr24:3152950-3152519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 84
               

               
Conread position:
               
152-255
               

               
Cow position:
               
chr24:41982815-41982712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-265
               

               
Cow position:
               
chr24:40607044-40607156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
152-307
               

               
Cow position:
               
chr24:33291547-33291399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
152-313
               

               
Cow position:
               
chr24:16378664-16378510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
152-329
               

               
Cow position:
               
chr24:32419649-32419827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
152-350
               

               
Cow position:
               
chr24:13354423-13354226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
133, 190
               

               
Conread position:
               
152-351
               

               
Cow position:
               
chr24:228102-227904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
152-353
               

               
Cow position:
               
chr24:5130671-5130468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr24:3006411-3006614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr24:13872411-13872614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr24:16993918-16993715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-357
               

               
Cow position:
               
chr24:39977174-39976977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
152-383
               

               
Cow position:
               
chr24:41963260-41963491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
183, 69
               

               
Conread position:
               
152-385
               

               
Cow position:
               
chr24:13084255-13084021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 50
               

               
Conread position:
               
152-386
               

               
Cow position:
               
chr24:32456054-32456293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 62
               

               
Conread position:
               
152-387
               

               
Cow position:
               
chr24:35836609-35836372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
152-389
               

               
Cow position:
               
chr24:32668904-32669147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
152-390
               

               
Cow position:
               
chr24:23184411-23184165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
152-392
               

               
Cow position:
               
chr24:30017929-30017683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 211
               

               
Conread position:
               
152-393
               

               
Cow position:
               
chr24:22187486-22187250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
198, 140
               

               
Conread position:
               
152-396
               

               
Cow position:
               
chr24:40974615-40974873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 198
               

               
Conread position:
               
152-415
               

               
Cow position:
               
chr24:12508120-12508383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 87
               

               
Conread position:
               
152-421
               

               
Cow position:
               
chr24:5448440-5448169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 204
               

               
Conread position:
               
152-434
               

               
Cow position:
               
chr24:40518656-40518382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
77, 183
               

               
Conread position:
               
152-435
               

               
Cow position:
               
chr24:1861941-1861656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-436
               

               
Cow position:
               
chr24:274214-273929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
124, 218
               

               
Conread position:
               
152-436
               

               
Cow position:
               
chr24:16298389-16298665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
133, 69
               

               
Conread position:
               
152-436
               

               
Cow position:
               
chr24:42835437-42835723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-445
               

               
Cow position:
               
chr24:32739986-32739697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 150
               

               
Conread position:
               
152-447
               

               
Cow position:
               
chr24:27185588-27185885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-450
               

               
Cow position:
               
chr24:34213608-34213305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 240
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr24:5931496-5931791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
133, 164
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr24:6090943-6091245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr24:13880682-13880984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr24:20368518-20368822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr24:29788332-29788030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr24:38488477-38488779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
124, 186
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr24:40247462-40247761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
226, 120
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr24:43384380-43384682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
121, 235
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr24:16475420-16475724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr24:16993694-16993390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr24:22954497-22954801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr24:23051945-23051642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
133, 140
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr24:27852438-27852134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-460
               

               
Cow position:
               
chr24:14337356-14337662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 216
               

               
Conread position:
               
152-462
               

               
Cow position:
               
chr24:3631143-3631442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 165
               

               
Conread position:
               
152-462
               

               
Cow position:
               
chr24:25677659-25677971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
152-466
               

               
Cow position:
               
chr24:6161219-6160912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
125, 84
               

               
Conread position:
               
152-466
               

               
Cow position:
               
chr24:32360902-32360586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
125, 114
               

               
Conread position:
               
152-468
               

               
Cow position:
               
chr24:15919332-15919647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 48
               

               
Conread position:
               
152-469
               

               
Cow position:
               
chr24:38896920-38896601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
126, 235
               

               
Conread position:
               
152-473
               

               
Cow position:
               
chr24:39681496-39681798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
127, 69
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr24:11748177-11747858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-498
               

               
Cow position:
               
chr24:12498626-12498967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
180, 76
               

               
Conread position:
               
152-506
               

               
Cow position:
               
chr24:42581205-42580869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
120, 234
               

               
Conread position:
               
152-534
               

               
Cow position:
               
chr24:15472984-15473358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 78
               

               
Conread position:
               
152-537
               

               
Cow position:
               
chr24:28353785-28354158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 105
               

               
Conread position:
               
152-544
               

               
Cow position:
               
chr24:15802770-15803166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-594
               

               
Cow position:
               
chr24:32823169-32822710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
152-594
               

               
Cow position:
               
chr24:43432412-43432851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 131
               

               
Conread position:
               
152-606
               

               
Cow position:
               
chr24:39900691-39900249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
125, 14
               

               
Conread position:
               
152-615
               

               
Cow position:
               
chr24:32370285-32369833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 182
               

               
Conread position:
               
152-626
               

               
Cow position:
               
chr24:17955809-17955352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 84
               

               
Conread position:
               
152-650
               

               
Cow position:
               
chr24:29673145-29673635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 231
               

               
Conread position:
               
152-683
               

               
Cow position:
               
chr24:16870160-16869633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
125, 211
               

               
Conread position:
               
152-705
               

               
Cow position:
               
chr24:18374417-18374935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
152-706
               

               
Cow position:
               
chr24:19466307-19465737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 328
               

               
Conread position:
               
152-709
               

               
Cow position:
               
chr24:2402751-2402202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
152-709
               

               
Cow position:
               
chr24:28690320-28690861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 185
               

               
Conread position:
               
152-709
               

               
Cow position:
               
chr24:33098861-33098297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 93
               

               
Conread position:
               
152-712
               

               
Cow position:
               
chr24:211607-212148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 237
               

               
Conread position:
               
152-713
               

               
Cow position:
               
chr24:35986085-35985554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 73
               

               
Conread position:
               
152-718
               

               
Cow position:
               
chr24:2391817-2392371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 237
               

               
Conread position:
               
152-718
               

               
Cow position:
               
chr24:18732489-18731924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 51
               

               
Conread position:
               
152-722
               

               
Cow position:
               
chr24:7917743-7917191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 134
               

               
Conread position:
               
152-725
               

               
Cow position:
               
chr24:11005289-11005864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
152-728
               

               
Cow position:
               
chr24:6071224-6071783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 77
               

               
Conread position:
               
152-729
               

               
Cow position:
               
chr24:30235504-30236066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 128
               

               
Conread position:
               
153-356
               

               
Cow position:
               
chr24:40249636-40249838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
123, 189
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr24:42908070-42907831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
132, 83
               

               
Conread position:
               
153-416
               

               
Cow position:
               
chr24:14913910-14913646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
153-452
               

               
Cow position:
               
chr24:8873441-8873145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
123, 190
               

               
Conread position:
               
153-454
               

               
Cow position:
               
chr24:37546689-37546990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
123, 189
               

               
Conread position:
               
153-473
               

               
Cow position:
               
chr24:37205249-37204934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 102
               

               
Conread position:
               
153-497
               

               
Cow position:
               
chr24:43733598-43733940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 36
               

               
Conread position:
               
153-589
               

               
Cow position:
               
chr24:29180528-29180942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 113
               

               
Conread position:
               
153-658
               

               
Cow position:
               
chr24:2674959-2675434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
153-693
               

               
Cow position:
               
chr24:20874307-20874839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
153-698
               

               
Cow position:
               
chr24:17407023-17407555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 76
               

               
Conread position:
               
153-709
               

               
Cow position:
               
chr24:28496961-28496408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 237
               

               
Conread position:
               
153-709
               

               
Cow position:
               
chr24:29606440-29605858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
153-724
               

               
Cow position:
               
chr24:32359191-32358629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
132, 102
               

               
Conread position:
               
154-476
               

               
Cow position:
               
chr24:16625873-16625541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
154-632
               

               
Cow position:
               
chr24:44054514-44054068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
122, 197
               

               
Conread position:
               
156-262
               

               
Cow position:
               
chr24:5151681-5151783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
156-274
               

               
Cow position:
               
chr24:5862039-5862161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
156-274
               

               
Cow position:
               
chr24:10517904-10518022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-274
               

               
Cow position:
               
chr24:28216476-28216594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-313
               

               
Cow position:
               
chr24:32087529-32087372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 76
               

               
Conread position:
               
156-354
               

               
Cow position:
               
chr24:8608425-8608619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
129, 59
               

               
Conread position:
               
156-355
               

               
Cow position:
               
chr24:35066833-35066630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
156-356
               

               
Cow position:
               
chr24:10311794-10312000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 193
               

               
Conread position:
               
156-364
               

               
Cow position:
               
chr24:12198392-12198189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
129, 86
               

               
Conread position:
               
156-380
               

               
Cow position:
               
chr24:12191589-12191823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
119, 110
               

               
Conread position:
               
156-387
               

               
Cow position:
               
chr24:11874994-11874769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
200, 65
               

               
Conread position:
               
156-390
               

               
Cow position:
               
chr24:35503021-35502792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
184, 71
               

               
Conread position:
               
156-393
               

               
Cow position:
               
chr24:30515027-30515258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
197, 41
               

               
Conread position:
               
156-401
               

               
Cow position:
               
chr24:13238040-13238281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
156-424
               

               
Cow position:
               
chr24:38593276-38593546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 10
               

               
Conread position:
               
156-436
               

               
Cow position:
               
chr24:26846647-26846366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
156-436
               

               
Cow position:
               
chr24:39238428-39238709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
156-437
               

               
Cow position:
               
chr24:2993300-2993016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
111, 203
               

               
Conread position:
               
156-452
               

               
Cow position:
               
chr24:6443396-6443691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
129, 63
               

               
Conread position:
               
156-452
               

               
Cow position:
               
chr24:36268631-36268927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 165
               

               
Conread position:
               
156-454
               

               
Cow position:
               
chr24:4241067-4240767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
129, 233
               

               
Conread position:
               
156-454
               

               
Cow position:
               
chr24:32854168-32854470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
129, 208
               

               
Conread position:
               
156-456
               

               
Cow position:
               
chr24:5608499-5608799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
243, 185
               

               
Conread position:
               
156-458
               

               
Cow position:
               
chr24:14279517-14279822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 234
               

               
Conread position:
               
156-458
               

               
Cow position:
               
chr24:37246588-37246282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 229
               

               
Conread position:
               
156-459
               

               
Cow position:
               
chr24:6413436-6413741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
129, 233
               

               
Conread position:
               
156-465
               

               
Cow position:
               
chr24:25229444-25229121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
66, 128
               

               
Conread position:
               
156-469
               

               
Cow position:
               
chr24:14363450-14363148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
116, 200
               

               
Conread position:
               
156-473
               

               
Cow position:
               
chr24:28724065-28724378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
156-473
               

               
Cow position:
               
chr24:30860258-30860581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 236
               

               
Conread position:
               
156-480
               

               
Cow position:
               
chr24:36486434-36486107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
156-486
               

               
Cow position:
               
chr24:39729790-39729457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 233
               

               
Conread position:
               
156-491
               

               
Cow position:
               
chr24:38684473-38684141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
207, 203
               

               
Conread position:
               
156-493
               

               
Cow position:
               
chr24:33985385-33985050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
222, 110
               

               
Conread position:
               
156-529
               

               
Cow position:
               
chr24:43693123-43692719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
156-535
               

               
Cow position:
               
chr24:41333248-41332871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
156-609
               

               
Cow position:
               
chr24:43363990-43364435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
156-616
               

               
Cow position:
               
chr24:29170606-29171044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 71
               

               
Conread position:
               
156-646
               

               
Cow position:
               
chr24:814632-814159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 73
               

               
Conread position:
               
156-669
               

               
Cow position:
               
chr24:32213040-32212527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
97, 234
               

               
Conread position:
               
156-693
               

               
Cow position:
               
chr24:44041376-44040852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
156-709
               

               
Cow position:
               
chr24:32054301-32054819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 187
               

               
Conread position:
               
156-712
               

               
Cow position:
               
chr24:44987743-44987192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
156-713
               

               
Cow position:
               
chr24:11045917-11045379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 73
               

               
Conread position:
               
156-717
               

               
Cow position:
               
chr24:27874232-27874758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 188
               

               
Conread position:
               
156-725
               

               
Cow position:
               
chr24:28721510-28722072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 144
               

               
Conread position:
               
156-726
               

               
Cow position:
               
chr24:5141563-5142126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 240
               

               
Conread position:
               
156-727
               

               
Cow position:
               
chr24:18485370-18484800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 232
               

               
Conread position:
               
156-728
               

               
Cow position:
               
chr24:39289646-39290241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
151, 120
               

               
Conread position:
               
156-729
               

               
Cow position:
               
chr24:19658177-19658729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 235
               

               
Conread position:
               
156-731
               

               
Cow position:
               
chr24:3165455-3166016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 52
               

               
Conread position:
               
157-278
               

               
Cow position:
               
chr24:27039513-27039634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
157-362
               

               
Cow position:
               
chr24:16143510-16143715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
119, 199
               

               
Conread position:
               
157-372
               

               
Cow position:
               
chr24:40781947-40781733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
119, 185
               

               
Conread position:
               
157-402
               

               
Cow position:
               
chr24:27229414-27229174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
200, 123
               

               
Conread position:
               
157-447
               

               
Cow position:
               
chr24:20923233-20923504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
118, 72
               

               
Conread position:
               
157-453
               

               
Cow position:
               
chr24:41006480-41006776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
157-530
               

               
Cow position:
               
chr24:18405673-18405315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 123
               

               
Conread position:
               
157-709
               

               
Cow position:
               
chr24:3493526-3494056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 10
               

               
Conread position:
               
158-322
               

               
Cow position:
               
chr24:32070300-32070467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 65
               

               
Conread position:
               
158-327
               

               
Cow position:
               
chr24:25524699-25524874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
158-339
               

               
Cow position:
               
chr24:30965053-30964875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 144
               

               
Conread position:
               
158-391
               

               
Cow position:
               
chr24:38643268-38643507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
118, 108
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr24:17993042-17992746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
220, 183
               

               
Conread position:
               
158-460
               

               
Cow position:
               
chr24:11006846-11007151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 244
               

               
Conread position:
               
158-472
               

               
Cow position:
               
chr24:21264874-21264565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 104
               

               
Conread position:
               
158-709
               

               
Cow position:
               
chr24:25320624-25321160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
159-402
               

               
Cow position:
               
chr24:15288490-15288741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
159-452
               

               
Cow position:
               
chr24:40259780-40260075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
126, 183
               

               
Conread position:
               
159-473
               

               
Cow position:
               
chr24:38266820-38267134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 189
               

               
Conread position:
               
159-708
               

               
Cow position:
               
chr24:39850244-39849718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
491, 126
               

               
Conread position:
               
159-717
               

               
Cow position:
               
chr24:12851371-12851878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
160-452
               

               
Cow position:
               
chr24:40280763-40280471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
125, 107
               

               
Conread position:
               
160-467
               

               
Cow position:
               
chr24:20970158-20969861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 181
               

               
Conread position:
               
160-517
               

               
Cow position:
               
chr24:11876518-11876871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 38
               

               
Conread position:
               
161-274
               

               
Cow position:
               
chr24:41670639-41670527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
161-452
               

               
Cow position:
               
chr24:6921740-6922033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
115, 226
               

               
Conread position:
               
162-322
               

               
Cow position:
               
chr24:4724664-4724820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
163-392
               

               
Cow position:
               
chr24:8184056-8184285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
172, 53
               

               
Conread position:
               
163-447
               

               
Cow position:
               
chr24:41206746-41206465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
122, 179
               

               
Conread position:
               
163-728
               

               
Cow position:
               
chr24:24491373-24490832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 64
               

               
Conread position:
               
169-382
               

               
Cow position:
               
chr24:17274018-17273799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
169-386
               

               
Cow position:
               
chr24:185170-184953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
169-447
               

               
Cow position:
               
chr24:5643939-5643658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 99
               

               
Conread position:
               
169-449
               

               
Cow position:
               
chr24:34532766-34533048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
169-452
               

               
Cow position:
               
chr24:19707213-19707492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
169-514
               

               
Cow position:
               
chr24:29027695-29028021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
188, 60
               

               
Conread position:
               
169-717
               

               
Cow position:
               
chr24:20225380-20225929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 221
               

               
Conread position:
               
170-390
               

               
Cow position:
               
chr24:28911326-28911547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 67
               

               
Conread position:
               
170-451
               

               
Cow position:
               
chr24:42916884-42916612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
106, 95
               

               
Conread position:
               
170-454
               

               
Cow position:
               
chr24:27688108-27687822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
106, 217
               

               
Conread position:
               
171-452
               

               
Cow position:
               
chr24:27197325-27197042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
105, 216
               

               
Conread position:
               
171-458
               

               
Cow position:
               
chr24:38374933-38375214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 58
               

               
Conread position:
               
171-482
               

               
Cow position:
               
chr24:3214402-3214708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 42
               

               
Conread position:
               
172-459
               

               
Cow position:
               
chr24:21252804-21252518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
104, 217
               

               
Conread position:
               
172-544
               

               
Cow position:
               
chr24:4228266-4228636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
104, 215
               

               
Conread position:
               
172-617
               

               
Cow position:
               
chr24:33724219-33723761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
35, 233
               

               
Conread position:
               
172-717
               

               
Cow position:
               
chr24:15057037-15057568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
174-349
               

               
Cow position:
               
chr24:2300424-2300594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
102, 54
               

               
Conread position:
               
175-480
               

               
Cow position:
               
chr24:31370099-31369796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
110, 167
               

               
Conread position:
               
175-582
               

               
Cow position:
               
chr24:27341378-27340970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 217
               

               
Conread position:
               
176-462
               

               
Cow position:
               
chr24:7301108-7301394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 36
               

               
Conread position:
               
176-717
               

               
Cow position:
               
chr24:15692671-15693205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
177-274
               

               
Cow position:
               
chr24:40631022-40631118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
177-383
               

               
Cow position:
               
chr24:28233041-28233252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 70
               

               
Conread position:
               
177-391
               

               
Cow position:
               
chr24:39123514-39123732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 124
               

               
Conread position:
               
178-441
               

               
Cow position:
               
chr24:19444382-19444119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
107, 88
               

               
Conread position:
               
178-731
               

               
Cow position:
               
chr24:43028680-43028129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 170
               

               
Conread position:
               
179-277
               

               
Cow position:
               
chr24:21696489-21696390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
179-392
               

               
Cow position:
               
chr24:16162451-16162664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
173, 93
               

               
Conread position:
               
179-454
               

               
Cow position:
               
chr24:2226447-2226170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 163
               

               
Conread position:
               
179-469
               

               
Cow position:
               
chr24:12957067-12956779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
97, 204
               

               
Conread position:
               
179-469
               

               
Cow position:
               
chr24:26385004-26384712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 210
               

               
Conread position:
               
179-603
               

               
Cow position:
               
chr24:15508890-15508475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
180-453
               

               
Cow position:
               
chr24:24498518-24498249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
105, 162
               

               
Conread position:
               
181-480
               

               
Cow position:
               
chr24:5435387-5435095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
181-600
               

               
Cow position:
               
chr24:17159409-17159817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
181-726
               

               
Cow position:
               
chr24:34272457-34273013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 182
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr24:24107533-24107360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 160
               

               
Conread position:
               
182-636
               

               
Cow position:
               
chr24:5754497-5754938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 138
               

               
Conread position:
               
183-613
               

               
Cow position:
               
chr24:3430379-3430813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 156
               

               
Conread position:
               
183-728
               

               
Cow position:
               
chr24:38347336-38347872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 205
               

               
Conread position:
               
185-380
               

               
Cow position:
               
chr24:14309222-14309416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 42
               

               
Conread position:
               
185-482
               

               
Cow position:
               
chr24:40091909-40091621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
189-647
               

               
Cow position:
               
chr24:28319543-28319097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 202
               

               
Conread position:
               
190-356
               

               
Cow position:
               
chr24:33338049-33337884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 152
               

               
Conread position:
               
190-458
               

               
Cow position:
               
chr24:27735907-27735651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
87, 71
               

               
Conread position:
               
191-452
               

               
Cow position:
               
chr24:27465900-27465654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
191-452
               

               
Cow position:
               
chr24:29494212-29493963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
144, 85
               

               
Conread position:
               
191-590
               

               
Cow position:
               
chr24:27054073-27054468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
193-409
               

               
Cow position:
               
chr24:20988333-20988113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 119
               

               
Conread position:
               
193-698
               

               
Cow position:
               
chr24:20740990-20741505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
194-544
               

               
Cow position:
               
chr24:27675115-27675463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
82, 193
               

               
Conread position:
               
195-710
               

               
Cow position:
               
chr24:17311540-17311053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 147
               

               
Conread position:
               
196-424
               

               
Cow position:
               
chr24:24854321-24854559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
196-529
               

               
Cow position:
               
chr24:34315029-34315351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
198-468
               

               
Cow position:
               
chr24:18734688-18734412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 107
               

               
Conread position:
               
199-458
               

               
Cow position:
               
chr24:40908689-40908951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 118
               

               
Conread position:
               
199-530
               

               
Cow position:
               
chr24:42007419-42007736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
201-644
               

               
Cow position:
               
chr24:42345331-42344886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
202-712
               

               
Cow position:
               
chr24:26929273-26928763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 187
               

               
Conread position:
               
203-452
               

               
Cow position:
               
chr24:20173149-20172898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 184
               

               
Conread position:
               
205-726
               

               
Cow position:
               
chr24:19535564-19535060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
207-681
               

               
Cow position:
               
chr24:29781843-29782311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
208-356
               

               
Cow position:
               
chr24:5998902-5998755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
208-452
               

               
Cow position:
               
chr24:20894826-20895072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 179
               

               
Conread position:
               
209-575
               

               
Cow position:
               
chr24:39842166-39841807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 83
               

               
Conread position:
               
209-729
               

               
Cow position:
               
chr24:9222693-9222186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
67, 133
               

               
Conread position:
               
210-389
               

               
Cow position:
               
chr24:14550185-14550374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
211-506
               

               
Cow position:
               
chr24:6914076-6913791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
213-530
               

               
Cow position:
               
chr24:30177923-30178237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 119
               

               
Conread position:
               
214-437
               

               
Cow position:
               
chr24:8770271-8770493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
214-454
               

               
Cow position:
               
chr24:4689386-4689628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 173
               

               
Conread position:
               
214-719
               

               
Cow position:
               
chr24:35332407-35332913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 170
               

               
Conread position:
               
217-725
               

               
Cow position:
               
chr24:44808936-44809441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr24:43683765-43683364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
219-469
               

               
Cow position:
               
chr24:35529614-35529861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 166
               

               
Conread position:
               
219-731
               

               
Cow position:
               
chr24:10671082-10671591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
221-709
               

               
Cow position:
               
chr24:31159324-31159805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 8
               

               
Conread position:
               
222-444
               

               
Cow position:
               
chr24:28600914-28600699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
15, 116
               

               
Conread position:
               
225-709
               

               
Cow position:
               
chr24:28699294-28699760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
227-607
               

               
Cow position:
               
chr24:28600153-28599786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
229-386
               

               
Cow position:
               
chr24:19804390-19804554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
229-462
               

               
Cow position:
               
chr24:35405868-35405632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
49, 161
               

               
Conread position:
               
232-480
               

               
Cow position:
               
chr24:27557999-27557749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 128
               

               
Conread position:
               
233-728
               

               
Cow position:
               
chr24:21606932-21606482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
234-626
               

               
Cow position:
               
chr24:43200566-43200183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 124
               

               
Conread position:
               
234-728
               

               
Cow position:
               
chr24:15861893-15861394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 151
               

               
Conread position:
               
236-380
               

               
Cow position:
               
chr24:28143971-28143830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
236-391
               

               
Cow position:
               
chr24:22839573-22839413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 150
               

               
Conread position:
               
236-466
               

               
Cow position:
               
chr24:6677212-6677449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
236-469
               

               
Cow position:
               
chr24:39742535-39742767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 167
               

               
Conread position:
               
236-472
               

               
Cow position:
               
chr24:40184333-40184568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
236-473
               

               
Cow position:
               
chr24:23685351-23685126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 141
               

               
Conread position:
               
236-486
               

               
Cow position:
               
chr24:21768352-21768602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 128
               

               
Conread position:
               
236-487
               

               
Cow position:
               
chr24:37386630-37386396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
236-510
               

               
Cow position:
               
chr24:22433340-22433614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
236-528
               

               
Cow position:
               
chr24:14729119-14729397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
236-529
               

               
Cow position:
               
chr24:27633123-27633406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 141
               

               
Conread position:
               
236-534
               

               
Cow position:
               
chr24:7023104-7023417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 269
               

               
Conread position:
               
236-594
               

               
Cow position:
               
chr24:6508053-6507710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
236-594
               

               
Cow position:
               
chr24:32759060-32758701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 175
               

               
Conread position:
               
236-613
               

               
Cow position:
               
chr24:8886626-8886990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
236-630
               

               
Cow position:
               
chr24:34369296-34368910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
236-664
               

               
Cow position:
               
chr24:35150240-35150649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
163, 87
               

               
Conread position:
               
236-695
               

               
Cow position:
               
chr24:31816295-31816736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 138
               

               
Conread position:
               
236-698
               

               
Cow position:
               
chr24:27096396-27096855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
236-700
               

               
Cow position:
               
chr24:44702688-44703129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
236-709
               

               
Cow position:
               
chr24:34742459-34742924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
236-717
               

               
Cow position:
               
chr24:17860541-17860079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 112
               

               
Conread position:
               
236-717
               

               
Cow position:
               
chr24:27608384-27607928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
236-728
               

               
Cow position:
               
chr24:6102543-6103017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
236-728
               

               
Cow position:
               
chr24:23695185-23694715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
237-390
               

               
Cow position:
               
chr24:21093750-21093591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
237-390
               

               
Cow position:
               
chr24:36730211-36730367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
237-425
               

               
Cow position:
               
chr24:43176209-43176404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
237-469
               

               
Cow position:
               
chr24:25424773-25424997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
7, 121
               

               
Conread position:
               
237-473
               

               
Cow position:
               
chr24:591621-591857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
237-473
               

               
Cow position:
               
chr24:29388961-29389185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
237-614
               

               
Cow position:
               
chr24:39905747-39905366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 48
               

               
Conread position:
               
237-631
               

               
Cow position:
               
chr24:18974912-18975307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
237-707
               

               
Cow position:
               
chr24:24755165-24755602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
237-708
               

               
Cow position:
               
chr24:18331447-18331894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
238-468
               

               
Cow position:
               
chr24:18324328-18324561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
238-530
               

               
Cow position:
               
chr24:35795028-35794739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
238-710
               

               
Cow position:
               
chr24:27726292-27725832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
238-727
               

               
Cow position:
               
chr24:28699769-28700237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 147
               

               
Conread position:
               
239-380
               

               
Cow position:
               
chr24:40206789-40206933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
239-386
               

               
Cow position:
               
chr24:28060713-28060564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
239-392
               

               
Cow position:
               
chr24:8591051-8591211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
239-451
               

               
Cow position:
               
chr24:2730857-2730651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
239-481
               

               
Cow position:
               
chr24:39955333-39955095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
239-606
               

               
Cow position:
               
chr24:7377383-7377026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
240-391
               

               
Cow position:
               
chr24:30144167-30144317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
240-701
               

               
Cow position:
               
chr24:35073806-35074249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 153
               

               
Conread position:
               
241-405
               

               
Cow position:
               
chr24:15639185-15639012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
241-436
               

               
Cow position:
               
chr24:28028990-28028794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
90, 144
               

               
Conread position:
               
241-451
               

               
Cow position:
               
chr24:42943407-42943188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
241-717
               

               
Cow position:
               
chr24:30229181-30229657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 182
               

               
Conread position:
               
241-725
               

               
Cow position:
               
chr24:25111917-25112388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 128
               

               
Conread position:
               
242-384
               

               
Cow position:
               
chr24:35429956-35429814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
113, 8
               

               
Conread position:
               
242-493
               

               
Cow position:
               
chr24:14746353-14746597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 31
               

               
Conread position:
               
242-513
               

               
Cow position:
               
chr24:17567106-17567364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
242-697
               

               
Cow position:
               
chr24:17294471-17294032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
242-711
               

               
Cow position:
               
chr24:43370963-43371420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
242-715
               

               
Cow position:
               
chr24:25885442-25884968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
242-725
               

               
Cow position:
               
chr24:40592437-40592902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
243-471
               

               
Cow position:
               
chr24:27941291-27941067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
243-621
               

               
Cow position:
               
chr24:24311218-24311589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
92, 144
               

               
Conread position:
               
243-689
               

               
Cow position:
               
chr24:20942894-20943315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
244-385
               

               
Cow position:
               
chr24:34320044-34320185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
244-719
               

               
Cow position:
               
chr24:7913716-7914193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 145
               

               
Conread position:
               
245-658
               

               
Cow position:
               
chr24:2108533-2108118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
245-705
               

               
Cow position:
               
chr24:1269523-1269948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 97
               

               
Conread position:
               
245-709
               

               
Cow position:
               
chr24:34761615-34762071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
246-458
               

               
Cow position:
               
chr24:6900544-6900756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
247-386
               

               
Cow position:
               
chr24:43832081-43832221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
247-614
               

               
Cow position:
               
chr24:27748375-27748721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
273, 20
               

               
Conread position:
               
247-645
               

               
Cow position:
               
chr24:40849885-40850263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
249-376
               

               
Cow position:
               
chr24:28289706-28289576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
249-472
               

               
Cow position:
               
chr24:13626970-13626739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
249-472
               

               
Cow position:
               
chr24:30545133-30544916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
249-522
               

               
Cow position:
               
chr24:27967803-27968072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 134
               

               
Conread position:
               
249-705
               

               
Cow position:
               
chr24:30314313-30313858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 140
               

               
Conread position:
               
249-725
               

               
Cow position:
               
chr24:36404424-36403966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 139
               

               
Conread position:
               
250-644
               

               
Cow position:
               
chr24:19769222-19769606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
251-614
               

               
Cow position:
               
chr24:41755591-41755943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
252-384
               

               
Cow position:
               
chr24:42380976-42380842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
252-604
               

               
Cow position:
               
chr24:19495-19123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
252-645
               

               
Cow position:
               
chr24:18390562-18390189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
105, 130
               

               
Conread position:
               
253-469
               

               
Cow position:
               
chr24:21860493-21860283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
254-709
               

               
Cow position:
               
chr24:41980934-41980485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 30
               

               
Conread position:
               
255-488
               

               
Cow position:
               
chr24:12992784-12993015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
256-723
               

               
Cow position:
               
chr24:16994624-16995068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 83
               

               
Conread position:
               
258-488
               

               
Cow position:
               
chr24:5151967-5152192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
259-451
               

               
Cow position:
               
chr24:25950934-25950744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
263-499
               

               
Cow position:
               
chr24:2970870-2970639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
14, 123
               

               
Conread position:
               
263-617
               

               
Cow position:
               
chr24:39226735-39227078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
264-697
               

               
Cow position:
               
chr24:23442843-23442418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
269-473
               

               
Cow position:
               
chr24:31388276-31388477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
284-515
               

               
Cow position:
               
chr24:27207436-27207214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
72, 100
               

               
Conread position:
               
284-616
               

               
Cow position:
               
chr24:2096130-2095799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
74, 100
               

               
Conread position:
               
284-626
               

               
Cow position:
               
chr24:41068027-41068353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
284-709
               

               
Cow position:
               
chr24:18474989-18474554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
284-709
               

               
Cow position:
               
chr24:27039797-27040224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 133
               

               
Conread position:
               
284-718
               

               
Cow position:
               
chr24:42825739-42825331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
284-724
               

               
Cow position:
               
chr24:22114498-22114919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
284-727
               

               
Cow position:
               
chr24:10498969-10499411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
284-728
               

               
Cow position:
               
chr24:13808819-13808369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
284-728
               

               
Cow position:
               
chr24:17943406-17942985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
206, 72
               

               
Conread position:
               
286-462
               

               
Cow position:
               
chr24:30776907-30776732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 100
               

               
Conread position:
               
286-614
               

               
Cow position:
               
chr24:43927561-43927252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
286-626
               

               
Cow position:
               
chr24:27824225-27824555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
182, 44
               

               
Conread position:
               
287-591
               

               
Cow position:
               
chr24:33222178-33221881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
287-729
               

               
Cow position:
               
chr24:17285236-17284791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
67, 101
               

               
Conread position:
               
289-472
               

               
Cow position:
               
chr24:18695385-18695563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
289-709
               

               
Cow position:
               
chr24:19179681-19179261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
289-709
               

               
Cow position:
               
chr24:25194030-25194441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 105
               

               
Conread position:
               
289-728
               

               
Cow position:
               
chr24:18343812-18344261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
290-523
               

               
Cow position:
               
chr24:31382673-31382890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
291-529
               

               
Cow position:
               
chr24:27781720-27781966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
54, 197
               

               
Conread position:
               
292-415
               

               
Cow position:
               
chr24:6742082-6741959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 92
               

               
Conread position:
               
294-638
               

               
Cow position:
               
chr24:20250135-20249789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
295-726
               

               
Cow position:
               
chr24:27299941-27300354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 7
               

               
Conread position:
               
296-637
               

               
Cow position:
               
chr24:18771416-18771078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
296-642
               

               
Cow position:
               
chr24:28327312-28326973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
298-705
               

               
Cow position:
               
chr24:24457474-24457071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
299-530
               

               
Cow position:
               
chr24:10841442-10841211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
299-712
               

               
Cow position:
               
chr24:22689812-22689395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
300-697
               

               
Cow position:
               
chr24:31036132-31036501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
149, 49
               

               
Conread position:
               
301-723
               

               
Cow position:
               
chr24:21519215-21519620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
302-669
               

               
Cow position:
               
chr24:31359099-31359453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
304-720
               

               
Cow position:
               
chr24:16509751-16510158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
309-518
               

               
Cow position:
               
chr24:42420862-42420656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
309-530
               

               
Cow position:
               
chr24:39833732-39833519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
309-644
               

               
Cow position:
               
chr24:33465817-33465511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
230, 30
               

               
Conread position:
               
309-709
               

               
Cow position:
               
chr24:22079240-22079638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
310-645
               

               
Cow position:
               
chr24:15373194-15373517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
310-718
               

               
Cow position:
               
chr24:16645537-16645135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 29
               

               
Conread position:
               
311-482
               

               
Cow position:
               
chr24:34579180-34579011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
312-469
               

               
Cow position:
               
chr24:5911-5756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
312-713
               

               
Cow position:
               
chr24:10125648-10126058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 166
               

               
Conread position:
               
313-645
               

               
Cow position:
               
chr24:34008793-34008461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
24, 85
               

               
Conread position:
               
315-728
               

               
Cow position:
               
chr24:19800636-19801032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
317-724
               

               
Cow position:
               
chr24:352813-352415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
320-604
               

               
Cow position:
               
chr24:15707648-15707374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
320-658
               

               
Cow position:
               
chr24:28253501-28253842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
321-713
               

               
Cow position:
               
chr24:20801548-20801166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 70
               

               
Conread position:
               
321-726
               

               
Cow position:
               
chr24:19633869-19634250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
322-519
               

               
Cow position:
               
chr24:29708007-29707809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 170
               

               
Conread position:
               
322-530
               

               
Cow position:
               
chr24:34782990-34782792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
324-625
               

               
Cow position:
               
chr24:32070767-32071053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
325-709
               

               
Cow position:
               
chr24:16089037-16089405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
325-730
               

               
Cow position:
               
chr24:39143409-39143809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
326-719
               

               
Cow position:
               
chr24:25756485-25756113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
328-728
               

               
Cow position:
               
chr24:24155702-24155316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
330-480
               

               
Cow position:
               
chr24:37945831-37945681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
330-527
               

               
Cow position:
               
chr24:885878-885695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
330-614
               

               
Cow position:
               
chr24:30897733-30897457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
330-616
               

               
Cow position:
               
chr24:17434416-17434693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
335-728
               

               
Cow position:
               
chr24:22647532-22647141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
339-709
               

               
Cow position:
               
chr24:16895622-16895250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
342-722
               

               
Cow position:
               
chr24:27220274-27219899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
342-728
               

               
Cow position:
               
chr24:37024840-37025212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
343-472
               

               
Cow position:
               
chr24:30226758-30226885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
343-642
               

               
Cow position:
               
chr24:18017047-18017336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
186, 39
               

               
Conread position:
               
343-705
               

               
Cow position:
               
chr24:17832996-17832658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
344-625
               

               
Cow position:
               
chr24:14171875-14171602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
345-625
               

               
Cow position:
               
chr24:24662312-24662039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
206, 14
               

               
Conread position:
               
345-717
               

               
Cow position:
               
chr24:10299903-10300262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
345-717
               

               
Cow position:
               
chr24:29586813-29587183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
350-726
               

               
Cow position:
               
chr24:5633205-5632836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
179, 6
               

               
Conread position:
               
356-614
               

               
Cow position:
               
chr24:23187084-23186838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
195, 26
               

               
Conread position:
               
356-617
               

               
Cow position:
               
chr24:19736495-19736251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
356-696
               

               
Cow position:
               
chr24:25092363-25092686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
194, 26
               

               
Conread position:
               
356-709
               

               
Cow position:
               
chr24:35576702-35576362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
356-718
               

               
Cow position:
               
chr24:18999880-19000227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
356-726
               

               
Cow position:
               
chr24:9036029-9036379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
175, 26
               

               
Conread position:
               
357-644
               

               
Cow position:
               
chr24:26554767-26554486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
364-713
               

               
Cow position:
               
chr24:5397355-5397023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
172, 54
               

               
Conread position:
               
366-709
               

               
Cow position:
               
chr24:7777773-7777459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
237, 16
               

               
Conread position:
               
369-719
               

               
Cow position:
               
chr24:4724819-4725146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
164, 13
               

               
Conread position:
               
370-701
               

               
Cow position:
               
chr24:17752266-17751941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
159, 12
               

               
Conread position:
               
379-709
               

               
Cow position:
               
chr24:389952-390275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
161, 17
               

               
Conread position:
               
382-717
               

               
Cow position:
               
chr24:14550651-14550973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
383-626
               

               
Cow position:
               
chr24:28289395-28289161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
160, 85
               

               
Conread position:
               
385-700
               

               
Cow position:
               
chr24:36008342-36008652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
105, 84
               

               
Conread position:
               
385-726
               

               
Cow position:
               
chr24:32190925-32191251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
259, 46
               

               
Conread position:
               
386-523
               

               
Cow position:
               
chr24:29013106-29013237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
386-724
               

               
Cow position:
               
chr24:32739415-32739071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
386-727
               

               
Cow position:
               
chr24:12200555-12200215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
153, 98
               

               
Conread position:
               
387-481
               

               
Cow position:
               
chr24:28143242-28143148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
387-704
               

               
Cow position:
               
chr24:28233907-28234211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
288, 67
               

               
Conread position:
               
388-709
               

               
Cow position:
               
chr24:34390156-34390447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
318, 28
               

               
Conread position:
               
388-716
               

               
Cow position:
               
chr24:37395350-37395025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
147, 83
               

               
Conread position:
               
388-723
               

               
Cow position:
               
chr24:38006846-38006523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
251, 13
               

               
Conread position:
               
389-705
               

               
Cow position:
               
chr24:18314090-18313746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
389-709
               

               
Cow position:
               
chr24:18281775-18281460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
6, 82
               

               
Conread position:
               
389-714
               

               
Cow position:
               
chr24:27630263-27630579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
149, 81
               

               
Conread position:
               
389-725
               

               
Cow position:
               
chr24:36711061-36711386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 79
               

               
Conread position:
               
389-728
               

               
Cow position:
               
chr24:37037757-37038085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
137, 95
               

               
Conread position:
               
390-709
               

               
Cow position:
               
chr24:40537471-40537157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
127, 61
               

               
Conread position:
               
390-718
               

               
Cow position:
               
chr24:26880628-26880936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
146, 11
               

               
Conread position:
               
390-729
               

               
Cow position:
               
chr24:42364107-42364431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
146, 78
               

               
Conread position:
               
394-728
               

               
Cow position:
               
chr24:23863769-23863431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
66, 101
               

               
Conread position:
               
396-732
               

               
Cow position:
               
chr24:2359309-2358983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
167, 79
               

               
Conread position:
               
397-621
               

               
Cow position:
               
chr24:27418230-27418016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
397-705
               

               
Cow position:
               
chr24:27713536-27713239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
397-718
               

               
Cow position:
               
chr24:38478515-38478208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
398-726
               

               
Cow position:
               
chr24:20594407-20594740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
80, 155
               

               
Conread position:
               
402-698
               

               
Cow position:
               
chr24:29561701-29561415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
129, 38
               

               
Conread position:
               
402-725
               

               
Cow position:
               
chr24:10470394-10470065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
403-728
               

               
Cow position:
               
chr24:39523573-39523254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 68
               

               
Conread position:
               
404-645
               

               
Cow position:
               
chr24:39791414-39791650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
131, 67
               

               
Conread position:
               
407-728
               

               
Cow position:
               
chr24:37267539-37267859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
129, 61
               

               
Conread position:
               
408-651
               

               
Cow position:
               
chr24:31309274-31309512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
118, 62
               

               
Conread position:
               
410-719
               

               
Cow position:
               
chr24:25263859-25263547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
412-644
               

               
Cow position:
               
chr24:18368786-18368564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
413-709
               

               
Cow position:
               
chr24:37975097-37974808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
418-728
               

               
Cow position:
               
chr24:3656477-3656170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
419-725
               

               
Cow position:
               
chr24:42862514-42862816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
425-709
               

               
Cow position:
               
chr24:230172-230455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
426-693
               

               
Cow position:
               
chr24:4599610-4599870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
220, 39
               

               
Conread position:
               
426-696
               

               
Cow position:
               
chr24:28342247-28342524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
426-703
               

               
Cow position:
               
chr24:43832420-43832691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
428-729
               

               
Cow position:
               
chr24:880528-880818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
220, 43
               

               
Conread position:
               
431-709
               

               
Cow position:
               
chr24:28600537-28600263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 53
               

               
Conread position:
               
431-725
               

               
Cow position:
               
chr24:22511458-22511752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
432-724
               

               
Cow position:
               
chr24:39911134-39910842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
433-709
               

               
Cow position:
               
chr24:37823432-37823699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
435-728
               

               
Cow position:
               
chr24:13948027-13948318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
436-720
               

               
Cow position:
               
chr24:20364503-20364231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
436-726
               

               
Cow position:
               
chr24:19186842-19187122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
438-709
               

               
Cow position:
               
chr24:19623767-19624040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
438-728
               

               
Cow position:
               
chr24:19028758-19029034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
441-709
               

               
Cow position:
               
chr24:27284732-27284999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 30
               

               
Conread position:
               
441-713
               

               
Cow position:
               
chr24:15288732-15289008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
441-717
               

               
Cow position:
               
chr24:22156055-22156332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
441-728
               

               
Cow position:
               
chr24:31049526-31049820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
442-705
               

               
Cow position:
               
chr24:2992965-2992709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 29
               

               
Conread position:
               
445-716
               

               
Cow position:
               
chr24:24532093-24532353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
447-713
               

               
Cow position:
               
chr24:42175436-42175704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
32, 136
               

               
Conread position:
               
450-731
               

               
Cow position:
               
chr24:24810431-24810724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
470-713
               

               
Cow position:
               
chr24:26001325-26001566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
470-726
               

               
Cow position:
               
chr24:23575225-23574967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
471-710
               

               
Cow position:
               
chr24:28510735-28510967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
471-721
               

               
Cow position:
               
chr24:18755688-18755950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
473-713
               

               
Cow position:
               
chr24:42984330-42984574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
474-722
               

               
Cow position:
               
chr24:19730719-19730970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
475-709
               

               
Cow position:
               
chr24:23667175-23666950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
475-712
               

               
Cow position:
               
chr24:36036111-36035873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
152, 13
               

               
Conread position:
               
475-714
               

               
Cow position:
               
chr24:6742163-6742401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
475-716
               

               
Cow position:
               
chr24:5360660-5360893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
180, 60
               

               
Conread position:
               
476-723
               

               
Cow position:
               
chr24:8676766-8677015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
478-713
               

               
Cow position:
               
chr24:3464511-3464268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
479-722
               

               
Cow position:
               
chr24:11028738-11028499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
169, 11
               

               
Conread position:
               
479-727
               

               
Cow position:
               
chr24:37651671-37651914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
479-728
               

               
Cow position:
               
chr24:44104223-44103974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
484-709
               

               
Cow position:
               
chr24:21835009-21834788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
484-726
               

               
Cow position:
               
chr24:18137359-18137110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
6, 151
               

               
Conread position:
               
485-729
               

               
Cow position:
               
chr24:29985033-29984792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
488-700
               

               
Cow position:
               
chr24:32230554-32230338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
488-717
               

               
Cow position:
               
chr24:22133125-22133349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
493-669
               

               
Cow position:
               
chr24:7390374-7390201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
159, 43
               

               
Conread position:
               
493-726
               

               
Cow position:
               
chr24:13888663-13888896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 57
               

               
Conread position:
               
494-725
               

               
Cow position:
               
chr24:5447309-5447075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
496-722
               

               
Cow position:
               
chr24:18730306-18730535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
496-724
               

               
Cow position:
               
chr24:34079377-34079148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
496-726
               

               
Cow position:
               
chr24:10294428-10294196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
496-727
               

               
Cow position:
               
chr24:18884358-18884591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
496-728
               

               
Cow position:
               
chr24:17309175-17308947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
496-728
               

               
Cow position:
               
chr24:43155339-43155104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
497-701
               

               
Cow position:
               
chr24:25122307-25122504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
151, 38
               

               
Conread position:
               
497-728
               

               
Cow position:
               
chr24:35310684-35310921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
498-704
               

               
Cow position:
               
chr24:29539965-29539760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
499-727
               

               
Cow position:
               
chr24:22567068-22567299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
500-726
               

               
Cow position:
               
chr24:19598871-19599105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
501-717
               

               
Cow position:
               
chr24:7757739-7757953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
503-715
               

               
Cow position:
               
chr24:36286538-36286750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
507-722
               

               
Cow position:
               
chr24:16640882-16641104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
508-726
               

               
Cow position:
               
chr24:17689637-17689419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
509-709
               

               
Cow position:
               
chr24:32979193-32979000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
512-731
               

               
Cow position:
               
chr24:26695970-26695748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
516-709
               

               
Cow position:
               
chr24:32891062-32890871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
516-713
               

               
Cow position:
               
chr24:18874839-18874641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
516-717
               

               
Cow position:
               
chr24:33238283-33238071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
517-717
               

               
Cow position:
               
chr24:9300611-9300813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
519-730
               

               
Cow position:
               
chr24:3542284-3542498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
520-717
               

               
Cow position:
               
chr24:18695865-18696066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
525-709
               

               
Cow position:
               
chr24:18021279-18021094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 22
               

               
Conread position:
               
525-728
               

               
Cow position:
               
chr24:358359-358560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
525-729
               

               
Cow position:
               
chr24:34595736-34595531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 25
               

               
Conread position:
               
526-731
               

               
Cow position:
               
chr24:40025383-40025186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
122, 24
               

               
Conread position:
               
527-729
               

               
Cow position:
               
chr24:18302709-18302913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
541-717
               

               
Cow position:
               
chr24:37252166-37252341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
549-713
               

               
Cow position:
               
chr24:24540475-24540313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
550-697
               

               
Cow position:
               
chr24:27270943-27271092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-709
               

               
Cow position:
               
chr24:15557325-15557169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-709
               

               
Cow position:
               
chr24:27719510-27719355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 78
               

               
Conread position:
               
550-710
               

               
Cow position:
               
chr24:24091323-24091158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
550-712
               

               
Cow position:
               
chr24:25947845-25947681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
80, 97
               

               
Conread position:
               
550-713
               

               
Cow position:
               
chr24:6008153-6007993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
550-716
               

               
Cow position:
               
chr24:27066247-27066413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
550-717
               

               
Cow position:
               
chr24:11836387-11836217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
550-722
               

               
Cow position:
               
chr24:162020-162194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
550-725
               

               
Cow position:
               
chr24:26808608-26808781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
550-726
               

               
Cow position:
               
chr24:26588237-26588410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
550-727
               

               
Cow position:
               
chr24:250521-250342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-727
               

               
Cow position:
               
chr24:885425-885252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
550-727
               

               
Cow position:
               
chr24:44776160-44775981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr24:14373565-14373381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr24:18405264-18405083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr24:29677899-29677715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr24:36554681-36554507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 78
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr24:44896055-44896235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-729
               

               
Cow position:
               
chr24:40055494-40055317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
551-698
               

               
Cow position:
               
chr24:22194437-22194578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
551-716
               

               
Cow position:
               
chr24:18750725-18750892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
551-716
               

               
Cow position:
               
chr24:23046880-23046713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
551-718
               

               
Cow position:
               
chr24:5152541-5152710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
551-724
               

               
Cow position:
               
chr24:12120914-12121089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
551-728
               

               
Cow position:
               
chr24:18810849-18811026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 150
               

               
Conread position:
               
552-709
               

               
Cow position:
               
chr24:3148217-3148059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
552-712
               

               
Cow position:
               
chr24:5490977-5490815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
552-713
               

               
Cow position:
               
chr24:21524083-21524244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
552-719
               

               
Cow position:
               
chr24:33569319-33569149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
552-720
               

               
Cow position:
               
chr24:43445995-43445825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
552-725
               

               
Cow position:
               
chr24:2261686-2261860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
93, 170
               

               
Conread position:
               
552-728
               

               
Cow position:
               
chr24:18702417-18702594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
552-728
               

               
Cow position:
               
chr24:19768885-19769066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
552-728
               

               
Cow position:
               
chr24:26569476-26569653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
552-729
               

               
Cow position:
               
chr24:11921892-11921716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 164
               

               
Conread position:
               
552-732
               

               
Cow position:
               
chr24:20017409-20017223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
553-717
               

               
Cow position:
               
chr24:38428093-38427925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
553-728
               

               
Cow position:
               
chr24:39903984-39903814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 18
               

               
Conread position:
               
554-726
               

               
Cow position:
               
chr24:4635147-4634972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
554-727
               

               
Cow position:
               
chr24:25142630-25142810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
554-729
               

               
Cow position:
               
chr24:28256038-28255868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 75
               

               
Conread position:
               
555-706
               

               
Cow position:
               
chr24:3193251-3193099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 101
               

               
Conread position:
               
557-705
               

               
Cow position:
               
chr24:22641113-22641263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
557-709
               

               
Cow position:
               
chr24:38693855-38693702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 116
               

               
Conread position:
               
557-727
               

               
Cow position:
               
chr24:21656430-21656601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
557-729
               

               
Cow position:
               
chr24:17178627-17178802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
560-728
               

               
Cow position:
               
chr24:6488235-6488400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
563-703
               

               
Cow position:
               
chr24:18817416-18817559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
563-709
               

               
Cow position:
               
chr24:40578208-40578352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
563-731
               

               
Cow position:
               
chr24:39488374-39488544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 151
               

               
Conread position:
               
567-717
               

               
Cow position:
               
chr24:22155362-22155512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
577-717
               

               
Cow position:
               
chr24:35210098-35210241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               
Show alignments to all cow chromosomes.