• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010096F02.5
        

               
Conread position:
               
23-452
               

               
Cow position:
               
chr28:7336749-7337190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
28-606
               

               
Cow position:
               
chr28:11733592-11733018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
34-461
               

               
Cow position:
               
chr28:29806670-29806223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
34-703
               

               
Cow position:
               
chr28:31648596-31649261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
44-727
               

               
Cow position:
               
chr28:10868619-10867922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 5
               

               
Conread position:
               
45-504
               

               
Cow position:
               
chr28:23869024-23869475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
45-566
               

               
Cow position:
               
chr28:7751750-7751239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
45-594
               

               
Cow position:
               
chr28:11931845-11931286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
75, 7
               

               
Conread position:
               
46-482
               

               
Cow position:
               
chr28:5941280-5941728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
47-472
               

               
Cow position:
               
chr28:2949081-2949514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
47-686
               

               
Cow position:
               
chr28:4139136-4138486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
48-387
               

               
Cow position:
               
chr28:5054475-5054128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
48-412
               

               
Cow position:
               
chr28:10295731-10296112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
48-428
               

               
Cow position:
               
chr28:16475546-16475926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
48-450
               

               
Cow position:
               
chr28:34626589-34626989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
48-469
               

               
Cow position:
               
chr28:25805221-25805644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
48-482
               

               
Cow position:
               
chr28:29823980-29824424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
48-505
               

               
Cow position:
               
chr28:10762225-10762661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
42, 22
               

               
Conread position:
               
48-606
               

               
Cow position:
               
chr28:28340839-28341406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
48-729
               

               
Cow position:
               
chr28:24965925-24966608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
49-258
               

               
Cow position:
               
chr28:34754098-34753877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-270
               

               
Cow position:
               
chr28:790151-789918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr28:13536472-13536709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr28:22735870-22736107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr28:28934167-28933930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-322
               

               
Cow position:
               
chr28:12342827-12342540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-354
               

               
Cow position:
               
chr28:30249922-30250238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr28:332244-332562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr28:2616028-2615710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr28:3882154-3881836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr28:7888289-7887971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr28:7946215-7945897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr28:10870885-10871203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr28:22582577-22582895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr28:23114742-23114424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr28:27754751-27755069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-387
               

               
Cow position:
               
chr28:34655880-34656238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-388
               

               
Cow position:
               
chr28:29044165-29044520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-428
               

               
Cow position:
               
chr28:12981010-12980614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-428
               

               
Cow position:
               
chr28:22300516-22300897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr28:1198991-1199392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr28:5311554-5311153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr28:9182665-9183065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr28:16182144-16182544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-447
               

               
Cow position:
               
chr28:10193239-10192827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-451
               

               
Cow position:
               
chr28:6319367-6318951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:1261801-1262218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:1575709-1575292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:1943500-1943082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:1957159-1957576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:2645509-2645921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:3627871-3628288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:5071619-5071202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:8111129-8111563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:10563190-10563604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:12117444-12117026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:15916732-15916315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:17369845-17370257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:18096518-18096933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:20966873-20966449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:21491630-21491213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:22319109-22318692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:22576996-22577413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:23309540-23309123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:23685834-23686251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:24592306-24592723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:25829191-25829604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:28471813-28472213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:29222491-29222079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:33689305-33689722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:34243503-34243920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr28:34731527-34731944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr28:9710358-9709939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr28:12701663-12702082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr28:15107784-15107365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr28:19186019-19186438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr28:24993283-24993702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr28:29683033-29683452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-456
               

               
Cow position:
               
chr28:7830357-7830781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
11, 308
               

               
Conread position:
               
49-456
               

               
Cow position:
               
chr28:22083957-22083536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-475
               

               
Cow position:
               
chr28:15605319-15605758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-480
               

               
Cow position:
               
chr28:15998697-15998279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
227, 22
               

               
Conread position:
               
49-481
               

               
Cow position:
               
chr28:25556422-25555983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr28:800741-800295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr28:5637847-5638293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr28:21893976-21893539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr28:25683413-25682967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr28:34579862-34579434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr28:34581557-34581129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
49-485
               

               
Cow position:
               
chr28:17687865-17687415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-487
               

               
Cow position:
               
chr28:6535001-6534550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-492
               

               
Cow position:
               
chr28:27478563-27479017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-506
               

               
Cow position:
               
chr28:481914-481442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-523
               

               
Cow position:
               
chr28:25826317-25825844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
49-530
               

               
Cow position:
               
chr28:5553368-5552913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
49-531
               

               
Cow position:
               
chr28:32589495-32589988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-711
               

               
Cow position:
               
chr28:22372113-22371469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
49-717
               

               
Cow position:
               
chr28:10589484-10588821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
50-436
               

               
Cow position:
               
chr28:27938617-27939017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
51-253
               

               
Cow position:
               
chr28:3494081-3493869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
51-274
               

               
Cow position:
               
chr28:6090703-6090938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
51-274
               

               
Cow position:
               
chr28:7005826-7006061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
51-279
               

               
Cow position:
               
chr28:24674264-24674504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
51-304
               

               
Cow position:
               
chr28:8972517-8972781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
51-318
               

               
Cow position:
               
chr28:32823903-32824186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
51-321
               

               
Cow position:
               
chr28:7344955-7345218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
51-330
               

               
Cow position:
               
chr28:3001068-3000776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
51-339
               

               
Cow position:
               
chr28:10578074-10577773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-354
               

               
Cow position:
               
chr28:12406379-12406087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-354
               

               
Cow position:
               
chr28:28724016-28724329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-370
               

               
Cow position:
               
chr28:1316247-1315914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-373
               

               
Cow position:
               
chr28:28185342-28185672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 210
               

               
Conread position:
               
51-384
               

               
Cow position:
               
chr28:7372708-7372360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
51-389
               

               
Cow position:
               
chr28:8372025-8372370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-391
               

               
Cow position:
               
chr28:7697460-7697105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
51-392
               

               
Cow position:
               
chr28:4046685-4047042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
51-400
               

               
Cow position:
               
chr28:7882347-7882716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-401
               

               
Cow position:
               
chr28:14742341-14742713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-406
               

               
Cow position:
               
chr28:5371365-5371000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
51-424
               

               
Cow position:
               
chr28:16388194-16388556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
51-424
               

               
Cow position:
               
chr28:31142421-31142041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 114
               

               
Conread position:
               
51-428
               

               
Cow position:
               
chr28:3462693-3463089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
51-428
               

               
Cow position:
               
chr28:15712805-15713192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-429
               

               
Cow position:
               
chr28:18516347-18515950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
51-430
               

               
Cow position:
               
chr28:6047589-6047982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-436
               

               
Cow position:
               
chr28:5805061-5805454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
51-436
               

               
Cow position:
               
chr28:19300838-19301228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-436
               

               
Cow position:
               
chr28:22208984-22208585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-436
               

               
Cow position:
               
chr28:32785425-32785032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-438
               

               
Cow position:
               
chr28:21129580-21129187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-439
               

               
Cow position:
               
chr28:16440943-16441323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
51-443
               

               
Cow position:
               
chr28:22254395-22253996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
51-450
               

               
Cow position:
               
chr28:12457713-12458112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
51-451
               

               
Cow position:
               
chr28:10772868-10773266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-452
               

               
Cow position:
               
chr28:882969-882554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
51-452
               

               
Cow position:
               
chr28:2422507-2422921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
51-453
               

               
Cow position:
               
chr28:5747908-5747501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-453
               

               
Cow position:
               
chr28:22304404-22304799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr28:5212136-5212551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr28:5361472-5361055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr28:17392363-17392780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr28:30098674-30099091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-459
               

               
Cow position:
               
chr28:24603723-24604136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-462
               

               
Cow position:
               
chr28:31972212-31971792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-469
               

               
Cow position:
               
chr28:17287775-17288188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
51-473
               

               
Cow position:
               
chr28:9851192-9851591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-473
               

               
Cow position:
               
chr28:14493103-14493515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
171, 25
               

               
Conread position:
               
51-473
               

               
Cow position:
               
chr28:29392543-29392985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
51-476
               

               
Cow position:
               
chr28:11827035-11827465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
51-480
               

               
Cow position:
               
chr28:23839758-23840182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-481
               

               
Cow position:
               
chr28:34150997-34150546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr28:786455-786898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr28:7745880-7746329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr28:17663151-17662708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr28:20934601-20934161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr28:30532200-30531757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr28:33640367-33640808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-485
               

               
Cow position:
               
chr28:18463066-18462627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
174, 12
               

               
Conread position:
               
51-487
               

               
Cow position:
               
chr28:26781626-26782073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-493
               

               
Cow position:
               
chr28:28116417-28116869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
32, 226
               

               
Conread position:
               
51-499
               

               
Cow position:
               
chr28:34082472-34082018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
51-520
               

               
Cow position:
               
chr28:5768746-5769213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
51-522
               

               
Cow position:
               
chr28:10478782-10478326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
51-524
               

               
Cow position:
               
chr28:5773207-5773655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
51-524
               

               
Cow position:
               
chr28:15375278-15374804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-528
               

               
Cow position:
               
chr28:17316408-17316888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-530
               

               
Cow position:
               
chr28:15063779-15063314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
151, 19
               

               
Conread position:
               
51-530
               

               
Cow position:
               
chr28:22279641-22279175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
51-576
               

               
Cow position:
               
chr28:10473751-10474278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-576
               

               
Cow position:
               
chr28:26419203-26418670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-576
               

               
Cow position:
               
chr28:26727868-26727346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
51-577
               

               
Cow position:
               
chr28:25070645-25071192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
51-584
               

               
Cow position:
               
chr28:25806140-25806653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
51-585
               

               
Cow position:
               
chr28:10529921-10529409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
51-589
               

               
Cow position:
               
chr28:18354761-18354249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
51-591
               

               
Cow position:
               
chr28:29035853-29035306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
51-594
               

               
Cow position:
               
chr28:2814956-2814419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 155
               

               
Conread position:
               
51-594
               

               
Cow position:
               
chr28:5792250-5792798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-599
               

               
Cow position:
               
chr28:33466364-33466927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-603
               

               
Cow position:
               
chr28:4536024-4536559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
51-606
               

               
Cow position:
               
chr28:8911677-8911126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
51-612
               

               
Cow position:
               
chr28:4188094-4188662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 69
               

               
Conread position:
               
51-614
               

               
Cow position:
               
chr28:34560904-34561453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
51-621
               

               
Cow position:
               
chr28:16084870-16085442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-621
               

               
Cow position:
               
chr28:18934020-18934571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
51-621
               

               
Cow position:
               
chr28:21598708-21598133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-636
               

               
Cow position:
               
chr28:11752604-11752009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
51-638
               

               
Cow position:
               
chr28:21354767-21355365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-645
               

               
Cow position:
               
chr28:16109496-16110078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
51-649
               

               
Cow position:
               
chr28:5770910-5771507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
51-686
               

               
Cow position:
               
chr28:30303644-30303027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
51-697
               

               
Cow position:
               
chr28:21363303-21363932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
51-705
               

               
Cow position:
               
chr28:13473856-13474499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
51-705
               

               
Cow position:
               
chr28:20408927-20409591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
51-705
               

               
Cow position:
               
chr28:22308206-22308844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
51-705
               

               
Cow position:
               
chr28:22500936-22500306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
51-707
               

               
Cow position:
               
chr28:25056513-25057158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
51-710
               

               
Cow position:
               
chr28:5684247-5684905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
51-710
               

               
Cow position:
               
chr28:11426992-11426343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
51-710
               

               
Cow position:
               
chr28:21867994-21868662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
51-711
               

               
Cow position:
               
chr28:11585664-11585003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
51-712
               

               
Cow position:
               
chr28:14657240-14657923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-712
               

               
Cow position:
               
chr28:16211549-16210892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
51-713
               

               
Cow position:
               
chr28:9285821-9285169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
51-713
               

               
Cow position:
               
chr28:11047119-11047803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-717
               

               
Cow position:
               
chr28:3144343-3143672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
51-717
               

               
Cow position:
               
chr28:5817399-5818050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
51-721
               

               
Cow position:
               
chr28:28766355-28765687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 101
               

               
Conread position:
               
51-726
               

               
Cow position:
               
chr28:21844500-21845172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
51-728
               

               
Cow position:
               
chr28:4308332-4307670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-728
               

               
Cow position:
               
chr28:21104301-21103599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
51-728
               

               
Cow position:
               
chr28:32305455-32304756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-729
               

               
Cow position:
               
chr28:17131063-17130377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-729
               

               
Cow position:
               
chr28:18790558-18791258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
51-732
               

               
Cow position:
               
chr28:10607067-10606413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
52-264
               

               
Cow position:
               
chr28:7981159-7980935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
52-356
               

               
Cow position:
               
chr28:25128439-25128124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
52-387
               

               
Cow position:
               
chr28:8716952-8716614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 264
               

               
Conread position:
               
52-469
               

               
Cow position:
               
chr28:11451930-11451494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
52-509
               

               
Cow position:
               
chr28:17030148-17029713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 20
               

               
Conread position:
               
52-614
               

               
Cow position:
               
chr28:26614439-26614983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
52-626
               

               
Cow position:
               
chr28:29199273-29199852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
52-635
               

               
Cow position:
               
chr28:26922832-26922238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
52-707
               

               
Cow position:
               
chr28:33163893-33163274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 18
               

               
Conread position:
               
53-330
               

               
Cow position:
               
chr28:19194307-19194597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
53-380
               

               
Cow position:
               
chr28:32366712-32366387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
177, 17
               

               
Conread position:
               
53-389
               

               
Cow position:
               
chr28:18180588-18180240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
53-391
               

               
Cow position:
               
chr28:33697657-33698020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
53-428
               

               
Cow position:
               
chr28:22317029-22317421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
87, 105
               

               
Conread position:
               
53-438
               

               
Cow position:
               
chr28:15590531-15590924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 205
               

               
Conread position:
               
53-457
               

               
Cow position:
               
chr28:21767350-21766933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
53-473
               

               
Cow position:
               
chr28:16215351-16214930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
53-598
               

               
Cow position:
               
chr28:21672359-21672886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
92, 17
               

               
Conread position:
               
53-609
               

               
Cow position:
               
chr28:11787162-11786612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
53-621
               

               
Cow position:
               
chr28:7864875-7865446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 189
               

               
Conread position:
               
53-637
               

               
Cow position:
               
chr28:25596207-25596759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
53-645
               

               
Cow position:
               
chr28:8022565-8021963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
53-697
               

               
Cow position:
               
chr28:3914255-3914897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
53-709
               

               
Cow position:
               
chr28:4070510-4071162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
53-719
               

               
Cow position:
               
chr28:8787105-8787753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
53-721
               

               
Cow position:
               
chr28:25726924-25727584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
53-724
               

               
Cow position:
               
chr28:15272714-15272051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 6
               

               
Conread position:
               
53-724
               

               
Cow position:
               
chr28:24671815-24672489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 76
               

               
Conread position:
               
53-728
               

               
Cow position:
               
chr28:14150784-14151448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
54-274
               

               
Cow position:
               
chr28:746716-746948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
54-453
               

               
Cow position:
               
chr28:23802203-23802605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
54-697
               

               
Cow position:
               
chr28:16346969-16346346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
55-712
               

               
Cow position:
               
chr28:4282945-4282282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
57-462
               

               
Cow position:
               
chr28:12049150-12048741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
63-452
               

               
Cow position:
               
chr28:15285990-15285587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 337
               

               
Conread position:
               
63-535
               

               
Cow position:
               
chr28:18717571-18717100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 196
               

               
Conread position:
               
63-606
               

               
Cow position:
               
chr28:6960051-6960611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 291
               

               
Conread position:
               
63-703
               

               
Cow position:
               
chr28:22322818-22323457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 338
               

               
Conread position:
               
64-278
               

               
Cow position:
               
chr28:1883299-1883085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
85, 54
               

               
Conread position:
               
64-367
               

               
Cow position:
               
chr28:10977419-10977740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
64-379
               

               
Cow position:
               
chr28:4058283-4058614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 176
               

               
Conread position:
               
64-451
               

               
Cow position:
               
chr28:19515822-19515436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
64-452
               

               
Cow position:
               
chr28:10512699-10513095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 291
               

               
Conread position:
               
64-452
               

               
Cow position:
               
chr28:34379610-34380013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 291
               

               
Conread position:
               
64-544
               

               
Cow position:
               
chr28:23823515-23823023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 336
               

               
Conread position:
               
65-482
               

               
Cow position:
               
chr28:6776077-6775647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 290
               

               
Conread position:
               
65-626
               

               
Cow position:
               
chr28:7549482-7548936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 52
               

               
Conread position:
               
66-271
               

               
Cow position:
               
chr28:13290621-13290398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
66-391
               

               
Cow position:
               
chr28:28590288-28590636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
66-452
               

               
Cow position:
               
chr28:30561021-30561422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
52, 334
               

               
Conread position:
               
66-732
               

               
Cow position:
               
chr28:20124346-20125007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 178
               

               
Conread position:
               
67-454
               

               
Cow position:
               
chr28:27684148-27683746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 335
               

               
Conread position:
               
67-484
               

               
Cow position:
               
chr28:14234544-14234948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr28:10900379-10900809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
69-716
               

               
Cow position:
               
chr28:23530424-23531074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 252
               

               
Conread position:
               
72-637
               

               
Cow position:
               
chr28:25248930-25249487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
72-728
               

               
Cow position:
               
chr28:7698397-7697756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
73-350
               

               
Cow position:
               
chr28:16003630-16003919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
76-258
               

               
Cow position:
               
chr28:2905014-2905196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
77-705
               

               
Cow position:
               
chr28:5930920-5931544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
80-328
               

               
Cow position:
               
chr28:29942730-29942985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
93-568
               

               
Cow position:
               
chr28:12758913-12758436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
107-728
               

               
Cow position:
               
chr28:11759922-11759337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 19
               

               
Conread position:
               
124-700
               

               
Cow position:
               
chr28:28798664-28798087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
124-703
               

               
Cow position:
               
chr28:10744834-10745414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
129-353
               

               
Cow position:
               
chr28:16365170-16364941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 168
               

               
Conread position:
               
129-482
               

               
Cow position:
               
chr28:5270517-5270870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
159, 213
               

               
Conread position:
               
129-594
               

               
Cow position:
               
chr28:13693384-13693839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 19
               

               
Conread position:
               
132-391
               

               
Cow position:
               
chr28:10514471-10514194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
134-453
               

               
Cow position:
               
chr28:20538488-20538809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
136-469
               

               
Cow position:
               
chr28:5825736-5826071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
81, 145
               

               
Conread position:
               
140-274
               

               
Cow position:
               
chr28:6472874-6473007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
140-585
               

               
Cow position:
               
chr28:20265021-20265481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
142-315
               

               
Cow position:
               
chr28:2842221-2842392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
142-456
               

               
Cow position:
               
chr28:33943961-33943646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
143-473
               

               
Cow position:
               
chr28:19295715-19295386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 97
               

               
Conread position:
               
143-482
               

               
Cow position:
               
chr28:6577306-6577624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
133, 70
               

               
Conread position:
               
144-462
               

               
Cow position:
               
chr28:23231417-23231102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 88
               

               
Conread position:
               
145-395
               

               
Cow position:
               
chr28:3011771-3011525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
131, 100
               

               
Conread position:
               
145-615
               

               
Cow position:
               
chr28:16415804-16416260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
131, 82
               

               
Conread position:
               
145-684
               

               
Cow position:
               
chr28:16412396-16412934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
146-275
               

               
Cow position:
               
chr28:9099306-9099436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
146-313
               

               
Cow position:
               
chr28:22329965-22330128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
146-320
               

               
Cow position:
               
chr28:3202787-3202962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
31, 136
               

               
Conread position:
               
146-420
               

               
Cow position:
               
chr28:3479915-3480193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 236
               

               
Conread position:
               
146-489
               

               
Cow position:
               
chr28:34208369-34208698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
192, 24
               

               
Conread position:
               
149-274
               

               
Cow position:
               
chr28:1428162-1428286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
149-331
               

               
Cow position:
               
chr28:11025420-11025238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
128, 113
               

               
Conread position:
               
149-351
               

               
Cow position:
               
chr28:26627821-26627625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 32
               

               
Conread position:
               
149-386
               

               
Cow position:
               
chr28:757606-757371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
128, 48
               

               
Conread position:
               
149-469
               

               
Cow position:
               
chr28:4215023-4215345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
136, 73
               

               
Conread position:
               
149-469
               

               
Cow position:
               
chr28:25411526-25411848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
127, 241
               

               
Conread position:
               
149-707
               

               
Cow position:
               
chr28:12430260-12430808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
149-707
               

               
Cow position:
               
chr28:26151678-26152213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
127, 63
               

               
Conread position:
               
149-724
               

               
Cow position:
               
chr28:10616297-10615732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 83
               

               
Conread position:
               
151-391
               

               
Cow position:
               
chr28:28779232-28779467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
125, 76
               

               
Conread position:
               
152-255
               

               
Cow position:
               
chr28:9637244-9637141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-273
               

               
Cow position:
               
chr28:30389793-30389672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-274
               

               
Cow position:
               
chr28:5145062-5144941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
152-274
               

               
Cow position:
               
chr28:6484618-6484496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-304
               

               
Cow position:
               
chr28:31847390-31847236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
152-318
               

               
Cow position:
               
chr28:2132319-2132154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
152-331
               

               
Cow position:
               
chr28:24694235-24694415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
152-331
               

               
Cow position:
               
chr28:33031888-33032067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
117, 39
               

               
Conread position:
               
152-339
               

               
Cow position:
               
chr28:10886220-10886031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
152-343
               

               
Cow position:
               
chr28:7443715-7443908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
152-351
               

               
Cow position:
               
chr28:3802851-3803039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
152-354
               

               
Cow position:
               
chr28:32729583-32729374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 117
               

               
Conread position:
               
152-355
               

               
Cow position:
               
chr28:22164630-22164828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
124, 56
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr28:2512715-2512512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
124, 182
               

               
Conread position:
               
152-361
               

               
Cow position:
               
chr28:10463950-10463742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
133, 190
               

               
Conread position:
               
152-361
               

               
Cow position:
               
chr28:26452949-26452736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
152-383
               

               
Cow position:
               
chr28:5434080-5433846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
95, 70
               

               
Conread position:
               
152-385
               

               
Cow position:
               
chr28:11924164-11923921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
152-386
               

               
Cow position:
               
chr28:10455874-10455634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-386
               

               
Cow position:
               
chr28:23111598-23111831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
152-388
               

               
Cow position:
               
chr28:10611916-10611678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 75
               

               
Conread position:
               
152-391
               

               
Cow position:
               
chr28:30967123-30967363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
124, 141
               

               
Conread position:
               
152-393
               

               
Cow position:
               
chr28:15258776-15258533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
193, 82
               

               
Conread position:
               
152-424
               

               
Cow position:
               
chr28:4957588-4957321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 66
               

               
Conread position:
               
152-428
               

               
Cow position:
               
chr28:25693901-25693624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
152-436
               

               
Cow position:
               
chr28:13323092-13322806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 235
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr28:1811085-1810790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
134, 15
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr28:4310900-4311201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
133, 160
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr28:5335603-5335302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
124, 66
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr28:11281046-11280744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr28:14113336-14113638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr28:14610415-14610717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
133, 190
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr28:16598058-16598362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
133, 70
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr28:25104746-25105048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr28:28098386-28098689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
133, 190
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr28:28356875-28356573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr28:30210044-30209743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
124, 234
               

               
Conread position:
               
152-453
               

               
Cow position:
               
chr28:12651259-12651561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
133, 94
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr28:1213893-1213588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
133, 237
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr28:1508791-1509094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 46
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr28:2089152-2089456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
133, 237
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr28:3891889-3892192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr28:6651070-6650766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr28:7715903-7715599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr28:7970828-7970524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr28:15408785-15408481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr28:15616461-15616765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-455
               

               
Cow position:
               
chr28:13371520-13371217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 197
               

               
Conread position:
               
152-456
               

               
Cow position:
               
chr28:3245999-3246290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
298, 23
               

               
Conread position:
               
152-459
               

               
Cow position:
               
chr28:14433986-14434294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-465
               

               
Cow position:
               
chr28:7685020-7684717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
152-469
               

               
Cow position:
               
chr28:7197196-7196878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
124, 56
               

               
Conread position:
               
152-481
               

               
Cow position:
               
chr28:23312660-23312330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr28:3187633-3187303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
133, 237
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr28:11505360-11505033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
133, 190
               

               
Conread position:
               
152-483
               

               
Cow position:
               
chr28:9848671-9848342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 114
               

               
Conread position:
               
152-490
               

               
Cow position:
               
chr28:10642360-10642025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 77
               

               
Conread position:
               
152-509
               

               
Cow position:
               
chr28:7503493-7503849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 236
               

               
Conread position:
               
152-514
               

               
Cow position:
               
chr28:16364315-16363956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 236
               

               
Conread position:
               
152-519
               

               
Cow position:
               
chr28:22171073-22170695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
152-544
               

               
Cow position:
               
chr28:7794503-7794112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
124, 236
               

               
Conread position:
               
152-544
               

               
Cow position:
               
chr28:10934503-10934113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
134, 235
               

               
Conread position:
               
152-578
               

               
Cow position:
               
chr28:5826604-5827024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 178
               

               
Conread position:
               
152-600
               

               
Cow position:
               
chr28:27503942-27503499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
124, 77
               

               
Conread position:
               
152-613
               

               
Cow position:
               
chr28:30842242-30842679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 61
               

               
Conread position:
               
152-629
               

               
Cow position:
               
chr28:14933618-14934083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 114
               

               
Conread position:
               
152-643
               

               
Cow position:
               
chr28:12946601-12947088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 49
               

               
Conread position:
               
152-699
               

               
Cow position:
               
chr28:14997720-14998258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 114
               

               
Conread position:
               
152-704
               

               
Cow position:
               
chr28:7268277-7267750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 66
               

               
Conread position:
               
152-709
               

               
Cow position:
               
chr28:661770-662304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
152-709
               

               
Cow position:
               
chr28:24606155-24605599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
133, 74
               

               
Conread position:
               
152-709
               

               
Cow position:
               
chr28:25701204-25700666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 134
               

               
Conread position:
               
152-709
               

               
Cow position:
               
chr28:30327428-30326897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 177
               

               
Conread position:
               
152-713
               

               
Cow position:
               
chr28:33884066-33884611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
152-717
               

               
Cow position:
               
chr28:11527598-11527047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 79
               

               
Conread position:
               
152-725
               

               
Cow position:
               
chr28:23616058-23616625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 238
               

               
Conread position:
               
152-729
               

               
Cow position:
               
chr28:8347378-8347957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 202
               

               
Conread position:
               
152-731
               

               
Cow position:
               
chr28:18139800-18139248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 204
               

               
Conread position:
               
152-731
               

               
Cow position:
               
chr28:22332206-22332760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 93
               

               
Conread position:
               
153-327
               

               
Cow position:
               
chr28:8290392-8290569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
153-331
               

               
Cow position:
               
chr28:22344363-22344540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr28:16246608-16246381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
199, 86
               

               
Conread position:
               
153-391
               

               
Cow position:
               
chr28:25334677-25334922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
153-436
               

               
Cow position:
               
chr28:28213900-28214184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 211
               

               
Conread position:
               
153-462
               

               
Cow position:
               
chr28:25563735-25564044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
153-567
               

               
Cow position:
               
chr28:4587753-4588160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 117
               

               
Conread position:
               
153-592
               

               
Cow position:
               
chr28:16686691-16687114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 81
               

               
Conread position:
               
154-356
               

               
Cow position:
               
chr28:33234745-33234946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
122, 188
               

               
Conread position:
               
154-392
               

               
Cow position:
               
chr28:19564934-19564692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
116, 7
               

               
Conread position:
               
154-610
               

               
Cow position:
               
chr28:18590931-18591376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 13
               

               
Conread position:
               
156-258
               

               
Cow position:
               
chr28:19552466-19552364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-274
               

               
Cow position:
               
chr28:5110696-5110578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-304
               

               
Cow position:
               
chr28:8935386-8935531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr28:1096024-1096186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
120, 66
               

               
Conread position:
               
156-352
               

               
Cow position:
               
chr28:3646369-3646561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
120, 49
               

               
Conread position:
               
156-354
               

               
Cow position:
               
chr28:10775739-10775940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
156-354
               

               
Cow position:
               
chr28:10867570-10867769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
156-355
               

               
Cow position:
               
chr28:16925552-16925351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
156-357
               

               
Cow position:
               
chr28:3097716-3097917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
129, 175
               

               
Conread position:
               
156-357
               

               
Cow position:
               
chr28:9647366-9647164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
156-380
               

               
Cow position:
               
chr28:2864584-2864365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
156-380
               

               
Cow position:
               
chr28:7485518-7485289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
156-386
               

               
Cow position:
               
chr28:11356268-11356026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
156-386
               

               
Cow position:
               
chr28:19358554-19358313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
156-387
               

               
Cow position:
               
chr28:11690545-11690302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
156-387
               

               
Cow position:
               
chr28:24737681-24737904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
156-390
               

               
Cow position:
               
chr28:4458533-4458759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
156-390
               

               
Cow position:
               
chr28:5117816-5118042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
156-392
               

               
Cow position:
               
chr28:9126529-9126285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
156-435
               

               
Cow position:
               
chr28:20760263-20759984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 42
               

               
Conread position:
               
156-452
               

               
Cow position:
               
chr28:14675167-14675462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
129, 66
               

               
Conread position:
               
156-454
               

               
Cow position:
               
chr28:9267760-9268056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
129, 233
               

               
Conread position:
               
156-460
               

               
Cow position:
               
chr28:17738418-17738113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 26
               

               
Conread position:
               
156-466
               

               
Cow position:
               
chr28:2280008-2279699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 233
               

               
Conread position:
               
156-472
               

               
Cow position:
               
chr28:26103393-26103681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
156-480
               

               
Cow position:
               
chr28:7209210-7208888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
144, 129
               

               
Conread position:
               
156-480
               

               
Cow position:
               
chr28:12593295-12593598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
156-482
               

               
Cow position:
               
chr28:13889604-13889934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
129, 186
               

               
Conread position:
               
156-513
               

               
Cow position:
               
chr28:10879434-10879777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
66, 171
               

               
Conread position:
               
156-522
               

               
Cow position:
               
chr28:3474632-3474978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 145
               

               
Conread position:
               
156-524
               

               
Cow position:
               
chr28:4022042-4022407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 100
               

               
Conread position:
               
156-528
               

               
Cow position:
               
chr28:12942052-12942405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
288, 63
               

               
Conread position:
               
156-530
               

               
Cow position:
               
chr28:8682191-8681814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 170
               

               
Conread position:
               
156-551
               

               
Cow position:
               
chr28:5904396-5904779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 175
               

               
Conread position:
               
156-575
               

               
Cow position:
               
chr28:23212326-23211907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
156-587
               

               
Cow position:
               
chr28:3770010-3769587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
61, 181
               

               
Conread position:
               
156-599
               

               
Cow position:
               
chr28:32300706-32300262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 234
               

               
Conread position:
               
156-606
               

               
Cow position:
               
chr28:32362427-32362859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
210, 176
               

               
Conread position:
               
156-613
               

               
Cow position:
               
chr28:21380541-21380988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 106
               

               
Conread position:
               
156-636
               

               
Cow position:
               
chr28:28163756-28164217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 92
               

               
Conread position:
               
156-644
               

               
Cow position:
               
chr28:20312934-20313415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 147
               

               
Conread position:
               
156-645
               

               
Cow position:
               
chr28:6971679-6971203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 111
               

               
Conread position:
               
156-700
               

               
Cow position:
               
chr28:25399550-25400062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
156-708
               

               
Cow position:
               
chr28:23793659-23793117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 129
               

               
Conread position:
               
156-710
               

               
Cow position:
               
chr28:2961158-2960611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 42
               

               
Conread position:
               
156-713
               

               
Cow position:
               
chr28:3024249-3023708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
156-713
               

               
Cow position:
               
chr28:3745863-3746405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 76
               

               
Conread position:
               
156-717
               

               
Cow position:
               
chr28:19222485-19221928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 185
               

               
Conread position:
               
156-717
               

               
Cow position:
               
chr28:34443103-34442544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
156-719
               

               
Cow position:
               
chr28:22132586-22133122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 186
               

               
Conread position:
               
156-723
               

               
Cow position:
               
chr28:34133516-34134072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 233
               

               
Conread position:
               
156-724
               

               
Cow position:
               
chr28:12964238-12964805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 21
               

               
Conread position:
               
156-727
               

               
Cow position:
               
chr28:10682162-10681596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 150
               

               
Conread position:
               
156-727
               

               
Cow position:
               
chr28:11547419-11546857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
203, 110
               

               
Conread position:
               
156-728
               

               
Cow position:
               
chr28:9426682-9426129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 166
               

               
Conread position:
               
156-728
               

               
Cow position:
               
chr28:34878309-34877750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 21
               

               
Conread position:
               
156-729
               

               
Cow position:
               
chr28:1837667-1838219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
185, 58
               

               
Conread position:
               
156-730
               

               
Cow position:
               
chr28:5203865-5204412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
378, 56
               

               
Conread position:
               
156-731
               

               
Cow position:
               
chr28:30293927-30293359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
157-365
               

               
Cow position:
               
chr28:24994512-24994717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 184
               

               
Conread position:
               
157-371
               

               
Cow position:
               
chr28:26983990-26983772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 209
               

               
Conread position:
               
157-384
               

               
Cow position:
               
chr28:31404147-31403921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
157-482
               

               
Cow position:
               
chr28:13356921-13356593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 72
               

               
Conread position:
               
157-617
               

               
Cow position:
               
chr28:16406747-16407197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
157-722
               

               
Cow position:
               
chr28:13267442-13267987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
157-727
               

               
Cow position:
               
chr28:31223933-31223334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 390
               

               
Conread position:
               
158-313
               

               
Cow position:
               
chr28:25476474-25476631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
158-422
               

               
Cow position:
               
chr28:1884888-1885161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
158-454
               

               
Cow position:
               
chr28:4582900-4583198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
118, 64
               

               
Conread position:
               
158-460
               

               
Cow position:
               
chr28:25762694-25762994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 64
               

               
Conread position:
               
158-525
               

               
Cow position:
               
chr28:3750981-3751334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 108
               

               
Conread position:
               
158-546
               

               
Cow position:
               
chr28:3256463-3256841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 105
               

               
Conread position:
               
158-580
               

               
Cow position:
               
chr28:29658828-29658415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
183, 127
               

               
Conread position:
               
158-728
               

               
Cow position:
               
chr28:16919499-16918950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 71
               

               
Conread position:
               
159-392
               

               
Cow position:
               
chr28:17762321-17762561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
114, 76
               

               
Conread position:
               
160-274
               

               
Cow position:
               
chr28:18278711-18278597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
160-305
               

               
Cow position:
               
chr28:7608276-7608134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
116, 45
               

               
Conread position:
               
160-384
               

               
Cow position:
               
chr28:12938666-12938891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
160-435
               

               
Cow position:
               
chr28:17359066-17358796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
160-487
               

               
Cow position:
               
chr28:30977950-30978262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
117, 37
               

               
Conread position:
               
160-607
               

               
Cow position:
               
chr28:23675812-23676241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 62
               

               
Conread position:
               
160-643
               

               
Cow position:
               
chr28:19080207-19079706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 251
               

               
Conread position:
               
160-644
               

               
Cow position:
               
chr28:11687361-11686885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 79
               

               
Conread position:
               
160-706
               

               
Cow position:
               
chr28:15600928-15601475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 106
               

               
Conread position:
               
161-726
               

               
Cow position:
               
chr28:17638199-17637637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
162-476
               

               
Cow position:
               
chr28:6486264-6486571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
114, 72
               

               
Conread position:
               
162-510
               

               
Cow position:
               
chr28:7590517-7590176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
162-709
               

               
Cow position:
               
chr28:3740518-3741073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 180
               

               
Conread position:
               
163-524
               

               
Cow position:
               
chr28:23480594-23480239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 71
               

               
Conread position:
               
164-312
               

               
Cow position:
               
chr28:10980808-10980957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
167-524
               

               
Cow position:
               
chr28:4880593-4880245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 214
               

               
Conread position:
               
169-351
               

               
Cow position:
               
chr28:3427188-3427010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
107, 60
               

               
Conread position:
               
169-356
               

               
Cow position:
               
chr28:10325047-10324860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 96
               

               
Conread position:
               
169-375
               

               
Cow position:
               
chr28:34123171-34122975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
107, 32
               

               
Conread position:
               
169-386
               

               
Cow position:
               
chr28:27982523-27982731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
169-391
               

               
Cow position:
               
chr28:15677573-15677791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
180, 58
               

               
Conread position:
               
169-454
               

               
Cow position:
               
chr28:34598248-34598535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
116, 173
               

               
Conread position:
               
169-488
               

               
Cow position:
               
chr28:30803276-30803593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
170-452
               

               
Cow position:
               
chr28:7936566-7936850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
106, 172
               

               
Conread position:
               
170-454
               

               
Cow position:
               
chr28:25893156-25892870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
106, 217
               

               
Conread position:
               
170-701
               

               
Cow position:
               
chr28:24343048-24343549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
171-330
               

               
Cow position:
               
chr28:27994993-27995151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
171-391
               

               
Cow position:
               
chr28:13725836-13726063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
171-476
               

               
Cow position:
               
chr28:19222919-19222621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
171-508
               

               
Cow position:
               
chr28:10534252-10533928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
178, 38
               

               
Conread position:
               
171-535
               

               
Cow position:
               
chr28:26269006-26269361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 54
               

               
Conread position:
               
171-613
               

               
Cow position:
               
chr28:12619240-12619683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 57
               

               
Conread position:
               
172-415
               

               
Cow position:
               
chr28:7013912-7013669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
206, 183
               

               
Conread position:
               
173-339
               

               
Cow position:
               
chr28:25768150-25768318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
173-356
               

               
Cow position:
               
chr28:23489812-23489630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
103, 169
               

               
Conread position:
               
173-392
               

               
Cow position:
               
chr28:13719197-13719418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
173-703
               

               
Cow position:
               
chr28:7512913-7512382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
175-451
               

               
Cow position:
               
chr28:22040349-22040071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 167
               

               
Conread position:
               
177-384
               

               
Cow position:
               
chr28:5366464-5366237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
177-454
               

               
Cow position:
               
chr28:12260172-12259893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
99, 210
               

               
Conread position:
               
177-454
               

               
Cow position:
               
chr28:30284097-30283818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
99, 210
               

               
Conread position:
               
177-489
               

               
Cow position:
               
chr28:2124120-2124417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 90
               

               
Conread position:
               
177-602
               

               
Cow position:
               
chr28:26684796-26685214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
178-418
               

               
Cow position:
               
chr28:7009324-7009095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
178-467
               

               
Cow position:
               
chr28:10888345-10888632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 212
               

               
Conread position:
               
179-454
               

               
Cow position:
               
chr28:7059967-7060244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
97, 208
               

               
Conread position:
               
180-473
               

               
Cow position:
               
chr28:15007846-15008135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
181-583
               

               
Cow position:
               
chr28:16770277-16770670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
182, 99
               

               
Conread position:
               
182-452
               

               
Cow position:
               
chr28:9276830-9277101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
95, 160
               

               
Conread position:
               
182-724
               

               
Cow position:
               
chr28:2819446-2819984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
186-421
               

               
Cow position:
               
chr28:28792163-28792392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 156
               

               
Conread position:
               
187-395
               

               
Cow position:
               
chr28:10456827-10456622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
187-491
               

               
Cow position:
               
chr28:34008262-34007951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
49, 208
               

               
Conread position:
               
188-727
               

               
Cow position:
               
chr28:10669266-10669812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 154
               

               
Conread position:
               
189-384
               

               
Cow position:
               
chr28:16879572-16879383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
189-391
               

               
Cow position:
               
chr28:16622706-16622909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
189-724
               

               
Cow position:
               
chr28:2800939-2801446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
189-724
               

               
Cow position:
               
chr28:6059774-6059255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
190-353
               

               
Cow position:
               
chr28:17613056-17613218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 152
               

               
Conread position:
               
194-376
               

               
Cow position:
               
chr28:5405185-5405362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
194-454
               

               
Cow position:
               
chr28:8066481-8066743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 193
               

               
Conread position:
               
195-392
               

               
Cow position:
               
chr28:16250345-16250141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
195-428
               

               
Cow position:
               
chr28:8740304-8740533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
197-453
               

               
Cow position:
               
chr28:19173832-19173575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
197-708
               

               
Cow position:
               
chr28:23008027-23007539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
198-586
               

               
Cow position:
               
chr28:31987306-31987696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
199-504
               

               
Cow position:
               
chr28:6546687-6546378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 193
               

               
Conread position:
               
200-430
               

               
Cow position:
               
chr28:16350336-16350103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
200-502
               

               
Cow position:
               
chr28:10035119-10035397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
200-617
               

               
Cow position:
               
chr28:15044152-15043749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
201-399
               

               
Cow position:
               
chr28:22351196-22351400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 175
               

               
Conread position:
               
201-544
               

               
Cow position:
               
chr28:1172968-1172627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 186
               

               
Conread position:
               
202-544
               

               
Cow position:
               
chr28:9390659-9390325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 184
               

               
Conread position:
               
203-454
               

               
Cow position:
               
chr28:34852488-34852741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 186
               

               
Conread position:
               
203-610
               

               
Cow position:
               
chr28:7228677-7228283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
204-506
               

               
Cow position:
               
chr28:29455944-29455653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
205-645
               

               
Cow position:
               
chr28:31110296-31109860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 178
               

               
Conread position:
               
206-372
               

               
Cow position:
               
chr28:5837822-5837992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
206-696
               

               
Cow position:
               
chr28:26743332-26743822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 153
               

               
Conread position:
               
207-422
               

               
Cow position:
               
chr28:16450980-16450780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
207-606
               

               
Cow position:
               
chr28:8963238-8963619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
209-436
               

               
Cow position:
               
chr28:31872034-31871809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
209-534
               

               
Cow position:
               
chr28:7606947-7607265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
211-382
               

               
Cow position:
               
chr28:8103674-8103499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
213-711
               

               
Cow position:
               
chr28:7144507-7145006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
214-514
               

               
Cow position:
               
chr28:26784750-26784454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 171
               

               
Conread position:
               
219-389
               

               
Cow position:
               
chr28:29953122-29952951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
219-454
               

               
Cow position:
               
chr28:97405-97168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 168
               

               
Conread position:
               
222-726
               

               
Cow position:
               
chr28:15263998-15263497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
227-614
               

               
Cow position:
               
chr28:5128996-5128618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
227-707
               

               
Cow position:
               
chr28:616134-616571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
233-445
               

               
Cow position:
               
chr28:9822236-9822031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
233-448
               

               
Cow position:
               
chr28:3408480-3408258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
233-707
               

               
Cow position:
               
chr28:3078941-3078494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 123
               

               
Conread position:
               
236-451
               

               
Cow position:
               
chr28:15688781-15688992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
121, 145
               

               
Conread position:
               
236-481
               

               
Cow position:
               
chr28:16244019-16243777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
41, 109
               

               
Conread position:
               
236-482
               

               
Cow position:
               
chr28:24887118-24887365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 153
               

               
Conread position:
               
236-482
               

               
Cow position:
               
chr28:28414410-28414656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
236-489
               

               
Cow position:
               
chr28:11380303-11380054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 168
               

               
Conread position:
               
236-506
               

               
Cow position:
               
chr28:27428492-27428748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
236-614
               

               
Cow position:
               
chr28:4841657-4841280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
236-620
               

               
Cow position:
               
chr28:13176939-13176573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 152
               

               
Conread position:
               
236-621
               

               
Cow position:
               
chr28:10172674-10172300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
41, 153
               

               
Conread position:
               
236-709
               

               
Cow position:
               
chr28:26719100-26719534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
236-710
               

               
Cow position:
               
chr28:3493044-3492582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
237-430
               

               
Cow position:
               
chr28:1099901-1099710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
237-473
               

               
Cow position:
               
chr28:23621289-23621518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
119, 147
               

               
Conread position:
               
237-473
               

               
Cow position:
               
chr28:24996848-24996615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
237-502
               

               
Cow position:
               
chr28:25424562-25424297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
8, 144
               

               
Conread position:
               
237-530
               

               
Cow position:
               
chr28:16253114-16252831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
237-637
               

               
Cow position:
               
chr28:26533283-26533678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
237-640
               

               
Cow position:
               
chr28:29434684-29434292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
42, 150
               

               
Conread position:
               
237-645
               

               
Cow position:
               
chr28:19026262-19025864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
237-710
               

               
Cow position:
               
chr28:4016276-4016728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
237-712
               

               
Cow position:
               
chr28:23459879-23460351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
237-713
               

               
Cow position:
               
chr28:34229970-34230439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
237-730
               

               
Cow position:
               
chr28:16204589-16204105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
238-463
               

               
Cow position:
               
chr28:7328644-7328859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
238-530
               

               
Cow position:
               
chr28:6861695-6861979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
238-726
               

               
Cow position:
               
chr28:21502137-21502605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
239-462
               

               
Cow position:
               
chr28:19133526-19133755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 207
               

               
Conread position:
               
239-523
               

               
Cow position:
               
chr28:6307635-6307910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
239-568
               

               
Cow position:
               
chr28:22484991-22485317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
118, 78
               

               
Conread position:
               
239-705
               

               
Cow position:
               
chr28:23410581-23410134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
239-709
               

               
Cow position:
               
chr28:16370332-16369885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 29
               

               
Conread position:
               
240-430
               

               
Cow position:
               
chr28:32813255-32813063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
241-472
               

               
Cow position:
               
chr28:9177009-9176782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
241-490
               

               
Cow position:
               
chr28:21873517-21873763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 129
               

               
Conread position:
               
241-613
               

               
Cow position:
               
chr28:2862606-2862977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 148
               

               
Conread position:
               
241-621
               

               
Cow position:
               
chr28:13865590-13865956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
241-639
               

               
Cow position:
               
chr28:33051765-33052171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
242-530
               

               
Cow position:
               
chr28:4057732-4058007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
242-718
               

               
Cow position:
               
chr28:9740217-9740671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
243-726
               

               
Cow position:
               
chr28:27218067-27218546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 146
               

               
Conread position:
               
243-728
               

               
Cow position:
               
chr28:24368204-24367718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 157
               

               
Conread position:
               
244-380
               

               
Cow position:
               
chr28:12934014-12933875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
244-460
               

               
Cow position:
               
chr28:13242076-13241867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
244-464
               

               
Cow position:
               
chr28:8348905-8348687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
244-514
               

               
Cow position:
               
chr28:13607633-13607898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 143
               

               
Conread position:
               
244-625
               

               
Cow position:
               
chr28:14512274-14512654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 104
               

               
Conread position:
               
244-690
               

               
Cow position:
               
chr28:16386758-16386341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 99
               

               
Conread position:
               
244-713
               

               
Cow position:
               
chr28:5236852-5236387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 40
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr28:22439968-22440122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
245-420
               

               
Cow position:
               
chr28:13936165-13936343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
245-461
               

               
Cow position:
               
chr28:14218727-14218513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
245-496
               

               
Cow position:
               
chr28:23775793-23776039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 145
               

               
Conread position:
               
245-705
               

               
Cow position:
               
chr28:22345768-22346222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
246-469
               

               
Cow position:
               
chr28:28076654-28076440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
246-506
               

               
Cow position:
               
chr28:2905330-2905576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
246-596
               

               
Cow position:
               
chr28:8408486-8408826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
246-644
               

               
Cow position:
               
chr28:22321172-22321556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
246-709
               

               
Cow position:
               
chr28:29416966-29416521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
247-468
               

               
Cow position:
               
chr28:9108201-9108414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
247-484
               

               
Cow position:
               
chr28:34636429-34636653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
247-523
               

               
Cow position:
               
chr28:24646291-24646557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 142
               

               
Conread position:
               
247-643
               

               
Cow position:
               
chr28:2898746-2899128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 138
               

               
Conread position:
               
248-697
               

               
Cow position:
               
chr28:4914350-4913900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
249-391
               

               
Cow position:
               
chr28:22583385-22583530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 29
               

               
Conread position:
               
250-731
               

               
Cow position:
               
chr28:7723642-7723163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 139
               

               
Conread position:
               
251-645
               

               
Cow position:
               
chr28:14649102-14649482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
252-428
               

               
Cow position:
               
chr28:13902203-13902019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
252-523
               

               
Cow position:
               
chr28:8084453-8084722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
254-390
               

               
Cow position:
               
chr28:25498746-25498603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
254-452
               

               
Cow position:
               
chr28:9294771-9294967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
254-725
               

               
Cow position:
               
chr28:33036707-33036264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
255-728
               

               
Cow position:
               
chr28:11423045-11422596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
256-670
               

               
Cow position:
               
chr28:26220021-26220424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
257-531
               

               
Cow position:
               
chr28:19394390-19394645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
257-713
               

               
Cow position:
               
chr28:9636696-9636249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
259-458
               

               
Cow position:
               
chr28:5658317-5658510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
260-712
               

               
Cow position:
               
chr28:34430663-34430216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
262-465
               

               
Cow position:
               
chr28:3077759-3077955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
262-709
               

               
Cow position:
               
chr28:11884757-11884327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
262-709
               

               
Cow position:
               
chr28:26340102-26340538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
16, 127
               

               
Conread position:
               
265-723
               

               
Cow position:
               
chr28:5144755-5144296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 133
               

               
Conread position:
               
266-466
               

               
Cow position:
               
chr28:8656966-8656774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
266-523
               

               
Cow position:
               
chr28:22739574-22739810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
267-727
               

               
Cow position:
               
chr28:9099705-9100151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 107
               

               
Conread position:
               
269-703
               

               
Cow position:
               
chr28:5273662-5273229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
273-391
               

               
Cow position:
               
chr28:23027841-23027962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
274-530
               

               
Cow position:
               
chr28:25459305-25459559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
283-585
               

               
Cow position:
               
chr28:11006964-11007281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 207
               

               
Conread position:
               
283-723
               

               
Cow position:
               
chr28:25973317-25973762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 80
               

               
Conread position:
               
283-729
               

               
Cow position:
               
chr28:11818173-11817716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
284-460
               

               
Cow position:
               
chr28:5188613-5188443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
284-474
               

               
Cow position:
               
chr28:13447497-13447672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
284-525
               

               
Cow position:
               
chr28:7980630-7980397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
284-644
               

               
Cow position:
               
chr28:18625011-18625374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
51, 79
               

               
Conread position:
               
284-706
               

               
Cow position:
               
chr28:12951221-12951617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 68
               

               
Conread position:
               
285-434
               

               
Cow position:
               
chr28:2888219-2888366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
285-529
               

               
Cow position:
               
chr28:3714591-3714825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
73, 100
               

               
Conread position:
               
285-722
               

               
Cow position:
               
chr28:751014-751447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 111
               

               
Conread position:
               
285-723
               

               
Cow position:
               
chr28:10053549-10053114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
286-565
               

               
Cow position:
               
chr28:2738021-2737745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
286-709
               

               
Cow position:
               
chr28:5074714-5074317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
286-716
               

               
Cow position:
               
chr28:5437301-5436875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
286-726
               

               
Cow position:
               
chr28:4884476-4884032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
290-412
               

               
Cow position:
               
chr28:10699696-10699819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 45
               

               
Conread position:
               
291-723
               

               
Cow position:
               
chr28:19054812-19055235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
292-717
               

               
Cow position:
               
chr28:4090248-4089849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
273, 61
               

               
Conread position:
               
294-510
               

               
Cow position:
               
chr28:12987196-12987412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 139
               

               
Conread position:
               
295-708
               

               
Cow position:
               
chr28:5224512-5224907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
296-717
               

               
Cow position:
               
chr28:27313948-27313515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
297-722
               

               
Cow position:
               
chr28:10844920-10845319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
297-727
               

               
Cow position:
               
chr28:4158753-4159183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
298-612
               

               
Cow position:
               
chr28:3169389-3169081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
300-629
               

               
Cow position:
               
chr28:7416204-7415885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
66, 59
               

               
Conread position:
               
301-716
               

               
Cow position:
               
chr28:4881440-4881038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 175
               

               
Conread position:
               
302-722
               

               
Cow position:
               
chr28:16418979-16419392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 51
               

               
Conread position:
               
304-729
               

               
Cow position:
               
chr28:26982938-26982509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 177
               

               
Conread position:
               
305-488
               

               
Cow position:
               
chr28:5236115-5236299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
306-717
               

               
Cow position:
               
chr28:25728011-25728397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
307-729
               

               
Cow position:
               
chr28:1383461-1383047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
309-479
               

               
Cow position:
               
chr28:3105052-3105229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 170
               

               
Conread position:
               
309-718
               

               
Cow position:
               
chr28:23724642-23724256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
309-732
               

               
Cow position:
               
chr28:4835032-4834612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
310-524
               

               
Cow position:
               
chr28:19023947-19024164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
310-636
               

               
Cow position:
               
chr28:18760228-18759923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
310-709
               

               
Cow position:
               
chr28:30937852-30937479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
310-724
               

               
Cow position:
               
chr28:6091174-6091575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
310-731
               

               
Cow position:
               
chr28:11866855-11866442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
312-530
               

               
Cow position:
               
chr28:22338820-22339019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 30
               

               
Conread position:
               
313-524
               

               
Cow position:
               
chr28:118238-118031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
315-530
               

               
Cow position:
               
chr28:28903847-28903638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
316-640
               

               
Cow position:
               
chr28:2132102-2131788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
316-709
               

               
Cow position:
               
chr28:4643944-4643566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
316-730
               

               
Cow position:
               
chr28:11829117-11828734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
43, 68
               

               
Conread position:
               
320-514
               

               
Cow position:
               
chr28:657623-657442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
320-728
               

               
Cow position:
               
chr28:26264628-26265052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
320-730
               

               
Cow position:
               
chr28:14720953-14720559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
325-645
               

               
Cow position:
               
chr28:2752666-2752353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
325-697
               

               
Cow position:
               
chr28:2523756-2524134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
325-717
               

               
Cow position:
               
chr28:12400042-12400454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 8
               

               
Conread position:
               
325-732
               

               
Cow position:
               
chr28:11798971-11798550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
326-617
               

               
Cow position:
               
chr28:32365675-32365956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
6, 67
               

               
Conread position:
               
326-709
               

               
Cow position:
               
chr28:11762532-11762902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
224, 34
               

               
Conread position:
               
326-732
               

               
Cow position:
               
chr28:13245380-13245791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
329-709
               

               
Cow position:
               
chr28:13527037-13527402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
330-727
               

               
Cow position:
               
chr28:3406595-3406188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
330-727
               

               
Cow position:
               
chr28:8291270-8291633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
335-728
               

               
Cow position:
               
chr28:4440143-4440522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
341-726
               

               
Cow position:
               
chr28:9812132-9812504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
210, 15
               

               
Conread position:
               
342-530
               

               
Cow position:
               
chr28:7608133-7607951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
342-594
               

               
Cow position:
               
chr28:18186404-18186646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
206, 15
               

               
Conread position:
               
342-705
               

               
Cow position:
               
chr28:24082117-24082470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
138, 17
               

               
Conread position:
               
342-725
               

               
Cow position:
               
chr28:8358751-8359120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
342-731
               

               
Cow position:
               
chr28:29989266-29988884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
343-731
               

               
Cow position:
               
chr28:1632807-1632420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
344-621
               

               
Cow position:
               
chr28:1538021-1538276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
344-709
               

               
Cow position:
               
chr28:30746879-30746534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
348-722
               

               
Cow position:
               
chr28:22571809-22571467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
349-530
               

               
Cow position:
               
chr28:13195228-13195404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
349-694
               

               
Cow position:
               
chr28:18370164-18369824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
355-719
               

               
Cow position:
               
chr28:10057730-10057373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
176, 27
               

               
Conread position:
               
356-677
               

               
Cow position:
               
chr28:2872780-2873092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
179, 26
               

               
Conread position:
               
356-709
               

               
Cow position:
               
chr28:7009112-7008777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
190, 33
               

               
Conread position:
               
356-713
               

               
Cow position:
               
chr28:19262726-19262376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 34
               

               
Conread position:
               
356-725
               

               
Cow position:
               
chr28:10863919-10863582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
358-722
               

               
Cow position:
               
chr28:3449164-3449526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
171, 24
               

               
Conread position:
               
364-709
               

               
Cow position:
               
chr28:11346614-11346285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
174, 27
               

               
Conread position:
               
364-710
               

               
Cow position:
               
chr28:5577390-5577737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
166, 99
               

               
Conread position:
               
366-709
               

               
Cow position:
               
chr28:7372255-7371906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
162, 97
               

               
Conread position:
               
370-705
               

               
Cow position:
               
chr28:5193196-5193523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 20
               

               
Conread position:
               
376-625
               

               
Cow position:
               
chr28:17601999-17601754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
381-705
               

               
Cow position:
               
chr28:19564346-19564035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
165, 35
               

               
Conread position:
               
381-709
               

               
Cow position:
               
chr28:22813147-22813452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
382-524
               

               
Cow position:
               
chr28:7644331-7644473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
382-717
               

               
Cow position:
               
chr28:13371256-13370927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
383-636
               

               
Cow position:
               
chr28:17414582-17414343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
383-709
               

               
Cow position:
               
chr28:3011389-3011063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 95
               

               
Conread position:
               
383-726
               

               
Cow position:
               
chr28:1315681-1315326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
383-729
               

               
Cow position:
               
chr28:23447939-23447612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
218, 13
               

               
Conread position:
               
387-627
               

               
Cow position:
               
chr28:5166654-5166890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
138, 81
               

               
Conread position:
               
387-717
               

               
Cow position:
               
chr28:30234279-30234596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
387-729
               

               
Cow position:
               
chr28:3484465-3484808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
150, 103
               

               
Conread position:
               
388-709
               

               
Cow position:
               
chr28:23296212-23296523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
388-718
               

               
Cow position:
               
chr28:12672572-12672244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
137, 29
               

               
Conread position:
               
388-730
               

               
Cow position:
               
chr28:5199711-5200052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
131, 90
               

               
Conread position:
               
389-713
               

               
Cow position:
               
chr28:12933841-12933528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
390-686
               

               
Cow position:
               
chr28:26055366-26055659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
141, 83
               

               
Conread position:
               
390-700
               

               
Cow position:
               
chr28:12363270-12362965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
51, 82
               

               
Conread position:
               
395-725
               

               
Cow position:
               
chr28:10495385-10495080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
252, 33
               

               
Conread position:
               
395-726
               

               
Cow position:
               
chr28:11307612-11307297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
141, 73
               

               
Conread position:
               
396-728
               

               
Cow position:
               
chr28:6358513-6358186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
144, 21
               

               
Conread position:
               
397-656
               

               
Cow position:
               
chr28:32174527-32174785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
154, 75
               

               
Conread position:
               
397-664
               

               
Cow position:
               
chr28:7388869-7388611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
397-703
               

               
Cow position:
               
chr28:25128781-25129082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
397-710
               

               
Cow position:
               
chr28:11079204-11079505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
193, 78
               

               
Conread position:
               
398-697
               

               
Cow position:
               
chr28:17071232-17071532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
399-713
               

               
Cow position:
               
chr28:23578800-23579110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
400-726
               

               
Cow position:
               
chr28:11197772-11197451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
408-645
               

               
Cow position:
               
chr28:8147953-8147723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
118, 60
               

               
Conread position:
               
409-679
               

               
Cow position:
               
chr28:11559724-11559459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
411-729
               

               
Cow position:
               
chr28:5262433-5262746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
162, 9
               

               
Conread position:
               
413-709
               

               
Cow position:
               
chr28:4181917-4182205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 52
               

               
Conread position:
               
418-698
               

               
Cow position:
               
chr28:4045771-4046037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
237, 31
               

               
Conread position:
               
418-710
               

               
Cow position:
               
chr28:5139078-5138794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
130, 114
               

               
Conread position:
               
418-728
               

               
Cow position:
               
chr28:7350576-7350876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 47
               

               
Conread position:
               
422-645
               

               
Cow position:
               
chr28:7498235-7498006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
66, 135
               

               
Conread position:
               
422-646
               

               
Cow position:
               
chr28:13090604-13090382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
114, 46
               

               
Conread position:
               
422-710
               

               
Cow position:
               
chr28:7619230-7618955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 49
               

               
Conread position:
               
422-721
               

               
Cow position:
               
chr28:11815156-11814860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
426-709
               

               
Cow position:
               
chr28:3411066-3410785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
433-709
               

               
Cow position:
               
chr28:4013020-4013287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
433-717
               

               
Cow position:
               
chr28:33322387-33322664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
105, 42
               

               
Conread position:
               
434-722
               

               
Cow position:
               
chr28:5630020-5630316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
42, 127
               

               
Conread position:
               
441-695
               

               
Cow position:
               
chr28:20397429-20397176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
441-709
               

               
Cow position:
               
chr28:20759760-20759489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
446-709
               

               
Cow position:
               
chr28:32179630-32179903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
448-729
               

               
Cow position:
               
chr28:11059451-11059713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
451-709
               

               
Cow position:
               
chr28:34843623-34843368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
179, 27
               

               
Conread position:
               
451-717
               

               
Cow position:
               
chr28:3726262-3725996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
454-727
               

               
Cow position:
               
chr28:777626-777897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
461-713
               

               
Cow position:
               
chr28:4185861-4186111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
468-720
               

               
Cow position:
               
chr28:6975206-6975449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
468-722
               

               
Cow position:
               
chr28:17739789-17740044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
180, 22
               

               
Conread position:
               
471-723
               

               
Cow position:
               
chr28:24646561-24646803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
472-717
               

               
Cow position:
               
chr28:12991105-12991347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
475-716
               

               
Cow position:
               
chr28:21008695-21008460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
475-727
               

               
Cow position:
               
chr28:5254845-5255090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
476-729
               

               
Cow position:
               
chr28:8827136-8827388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
121, 47
               

               
Conread position:
               
478-724
               

               
Cow position:
               
chr28:6283514-6283272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
170, 12
               

               
Conread position:
               
479-710
               

               
Cow position:
               
chr28:2775022-2775255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
480-709
               

               
Cow position:
               
chr28:4006761-4006985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
168, 75
               

               
Conread position:
               
480-713
               

               
Cow position:
               
chr28:6935210-6934968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
480-717
               

               
Cow position:
               
chr28:10977817-10978050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
480-729
               

               
Cow position:
               
chr28:13133608-13133859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
481-705
               

               
Cow position:
               
chr28:8304224-8304442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
483-729
               

               
Cow position:
               
chr28:4101498-4101736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 143
               

               
Conread position:
               
486-728
               

               
Cow position:
               
chr28:4937261-4937017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
487-710
               

               
Cow position:
               
chr28:7132104-7131886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 6
               

               
Conread position:
               
488-705
               

               
Cow position:
               
chr28:8259611-8259832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
488-724
               

               
Cow position:
               
chr28:26810662-26810900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
490-725
               

               
Cow position:
               
chr28:9705638-9705874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
150, 45
               

               
Conread position:
               
492-728
               

               
Cow position:
               
chr28:13048296-13048062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
494-717
               

               
Cow position:
               
chr28:3200448-3200674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
496-717
               

               
Cow position:
               
chr28:8396326-8396537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
496-728
               

               
Cow position:
               
chr28:19128178-19127949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
497-703
               

               
Cow position:
               
chr28:27721694-27721894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
151, 35
               

               
Conread position:
               
497-709
               

               
Cow position:
               
chr28:32358100-32358308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
497-728
               

               
Cow position:
               
chr28:6563906-6563672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
497-728
               

               
Cow position:
               
chr28:18797312-18797536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
498-726
               

               
Cow position:
               
chr28:1655107-1654869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 159
               

               
Conread position:
               
500-722
               

               
Cow position:
               
chr28:5805666-5805880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
220, 32
               

               
Conread position:
               
500-726
               

               
Cow position:
               
chr28:26826218-26826444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
146, 32
               

               
Conread position:
               
501-709
               

               
Cow position:
               
chr28:15362575-15362782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
501-721
               

               
Cow position:
               
chr28:30902122-30902338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
502-705
               

               
Cow position:
               
chr28:5188432-5188229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
502-728
               

               
Cow position:
               
chr28:5673872-5674094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
503-709
               

               
Cow position:
               
chr28:11411538-11411335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
503-728
               

               
Cow position:
               
chr28:4163581-4163357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
504-697
               

               
Cow position:
               
chr28:18608369-18608173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
504-710
               

               
Cow position:
               
chr28:12973880-12974091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
506-727
               

               
Cow position:
               
chr28:34786560-34786785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
507-715
               

               
Cow position:
               
chr28:19994944-19994736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
508-728
               

               
Cow position:
               
chr28:659290-659063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
508-728
               

               
Cow position:
               
chr28:14242696-14242919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
512-719
               

               
Cow position:
               
chr28:25827724-25827514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
516-715
               

               
Cow position:
               
chr28:26820265-26820066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 10
               

               
Conread position:
               
517-705
               

               
Cow position:
               
chr28:20968566-20968376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
521-717
               

               
Cow position:
               
chr28:7885048-7885246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
525-724
               

               
Cow position:
               
chr28:2825441-2825645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
526-724
               

               
Cow position:
               
chr28:3678385-3678578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
526-728
               

               
Cow position:
               
chr28:2892275-2892479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
527-708
               

               
Cow position:
               
chr28:9109240-9109414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
528-726
               

               
Cow position:
               
chr28:10767402-10767604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
533-728
               

               
Cow position:
               
chr28:2077530-2077725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
115, 17
               

               
Conread position:
               
541-725
               

               
Cow position:
               
chr28:16200705-16200520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
107, 8
               

               
Conread position:
               
543-715
               

               
Cow position:
               
chr28:10480768-10480591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
545-728
               

               
Cow position:
               
chr28:32014825-32015008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
105, 100
               

               
Conread position:
               
550-693
               

               
Cow position:
               
chr28:19118015-19118160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-704
               

               
Cow position:
               
chr28:8656120-8655967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
550-708
               

               
Cow position:
               
chr28:30385198-30385358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-709
               

               
Cow position:
               
chr28:3423823-3423981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
550-709
               

               
Cow position:
               
chr28:11398751-11398590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-709
               

               
Cow position:
               
chr28:17680668-17680829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-710
               

               
Cow position:
               
chr28:4866527-4866373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
550-713
               

               
Cow position:
               
chr28:10252871-10252707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
550-713
               

               
Cow position:
               
chr28:22085496-22085336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 87
               

               
Conread position:
               
550-716
               

               
Cow position:
               
chr28:3759036-3759208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
550-716
               

               
Cow position:
               
chr28:11562200-11562032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
550-717
               

               
Cow position:
               
chr28:20281804-20281960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
550-717
               

               
Cow position:
               
chr28:28903514-28903345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 89
               

               
Conread position:
               
550-723
               

               
Cow position:
               
chr28:11827731-11827907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-726
               

               
Cow position:
               
chr28:117717-117536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
550-726
               

               
Cow position:
               
chr28:118655-118836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
550-726
               

               
Cow position:
               
chr28:10196819-10196650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
550-727
               

               
Cow position:
               
chr28:17620315-17620137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr28:4022719-4022894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 128
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr28:6301127-6301307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr28:7644786-7644963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr28:11305587-11305409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 95
               

               
Conread position:
               
550-729
               

               
Cow position:
               
chr28:8716342-8716154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
550-729
               

               
Cow position:
               
chr28:11239274-11239085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
21, 138
               

               
Conread position:
               
550-731
               

               
Cow position:
               
chr28:13356326-13356140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
551-719
               

               
Cow position:
               
chr28:17738106-17737936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
551-728
               

               
Cow position:
               
chr28:21744762-21744936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
156, 93
               

               
Conread position:
               
551-731
               

               
Cow position:
               
chr28:19038972-19038796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
97, 85
               

               
Conread position:
               
552-703
               

               
Cow position:
               
chr28:4870757-4870598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
552-709
               

               
Cow position:
               
chr28:10958850-10959003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
552-709
               

               
Cow position:
               
chr28:24698738-24698897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
552-713
               

               
Cow position:
               
chr28:4074017-4074185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
552-717
               

               
Cow position:
               
chr28:19394919-19395075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
552-727
               

               
Cow position:
               
chr28:11006774-11006953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 126
               

               
Conread position:
               
552-727
               

               
Cow position:
               
chr28:20173887-20174060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
552-728
               

               
Cow position:
               
chr28:12628784-12628960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
95, 149
               

               
Conread position:
               
552-729
               

               
Cow position:
               
chr28:34830202-34830374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
96, 126
               

               
Conread position:
               
553-716
               

               
Cow position:
               
chr28:26868102-26867943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
102, 85
               

               
Conread position:
               
553-724
               

               
Cow position:
               
chr28:8936199-8936366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
554-711
               

               
Cow position:
               
chr28:7503928-7504088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
554-717
               

               
Cow position:
               
chr28:26304113-26304279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 125
               

               
Conread position:
               
554-723
               

               
Cow position:
               
chr28:1646118-1645948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
554-727
               

               
Cow position:
               
chr28:21766005-21766177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 124
               

               
Conread position:
               
554-729
               

               
Cow position:
               
chr28:24238427-24238260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
557-713
               

               
Cow position:
               
chr28:15295289-15295446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 76
               

               
Conread position:
               
557-713
               

               
Cow position:
               
chr28:30922007-30921849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
557-716
               

               
Cow position:
               
chr28:16419578-16419736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 51
               

               
Conread position:
               
557-721
               

               
Cow position:
               
chr28:21263210-21263372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
153, 87
               

               
Conread position:
               
557-724
               

               
Cow position:
               
chr28:4077293-4077119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 162
               

               
Conread position:
               
557-726
               

               
Cow position:
               
chr28:27445520-27445354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
557-728
               

               
Cow position:
               
chr28:16159818-16159647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 59
               

               
Conread position:
               
558-709
               

               
Cow position:
               
chr28:5441844-5441693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
558-713
               

               
Cow position:
               
chr28:16857053-16856898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 67
               

               
Conread position:
               
560-708
               

               
Cow position:
               
chr28:2821314-2821464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
560-709
               

               
Cow position:
               
chr28:13174500-13174350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
560-713
               

               
Cow position:
               
chr28:7523360-7523207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
560-717
               

               
Cow position:
               
chr28:24767460-24767621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
560-723
               

               
Cow position:
               
chr28:3311168-3311002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
563-711
               

               
Cow position:
               
chr28:23728246-23728103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
563-731
               

               
Cow position:
               
chr28:3257047-3257223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
565-706
               

               
Cow position:
               
chr28:22278571-22278424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
565-717
               

               
Cow position:
               
chr28:8165155-8165000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
570-723
               

               
Cow position:
               
chr28:15411746-15411898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
572-717
               

               
Cow position:
               
chr28:5428686-5428547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
584-728
               

               
Cow position:
               
chr28:16964887-16964737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
584-728
               

               
Cow position:
               
chr28:18761930-18761785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
597-726
               

               
Cow position:
               
chr28:27941690-27941561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 87
               
Show alignments to all cow chromosomes.