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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010096F02.5
        

               
Conread position:
               
20-314
               

               
Cow position:
               
chr29:6774334-6774027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
23-362
               

               
Cow position:
               
chr29:20244797-20245142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
24-454
               

               
Cow position:
               
chr29:406760-406316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
33-454
               

               
Cow position:
               
chr29:16097796-16097368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
44-436
               

               
Cow position:
               
chr29:31093799-31093396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
74, 5
               

               
Conread position:
               
44-493
               

               
Cow position:
               
chr29:2521109-2521573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
76, 5
               

               
Conread position:
               
45-428
               

               
Cow position:
               
chr29:32516257-32516652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
73, 5
               

               
Conread position:
               
45-452
               

               
Cow position:
               
chr29:16382386-16382804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 5
               

               
Conread position:
               
45-452
               

               
Cow position:
               
chr29:38261727-38261305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
73, 5
               

               
Conread position:
               
47-356
               

               
Cow position:
               
chr29:32292356-32292676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
47-440
               

               
Cow position:
               
chr29:13017858-13017447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
47-449
               

               
Cow position:
               
chr29:2694466-2694881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
47-454
               

               
Cow position:
               
chr29:2837526-2837106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
47-482
               

               
Cow position:
               
chr29:19619504-19619060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
48-259
               

               
Cow position:
               
chr29:3574833-3574611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
48-351
               

               
Cow position:
               
chr29:31765805-31766122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
48-371
               

               
Cow position:
               
chr29:19857223-19857567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
48-392
               

               
Cow position:
               
chr29:10225498-10225146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
48-452
               

               
Cow position:
               
chr29:19524375-19523957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
48-452
               

               
Cow position:
               
chr29:24659567-24659151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
48-452
               

               
Cow position:
               
chr29:42807746-42808154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
48-469
               

               
Cow position:
               
chr29:2402452-2402886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
48-469
               

               
Cow position:
               
chr29:20213327-20213761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
48-482
               

               
Cow position:
               
chr29:16035632-16035183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
48-482
               

               
Cow position:
               
chr29:20055177-20055624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
48-530
               

               
Cow position:
               
chr29:44902169-44901686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
48-587
               

               
Cow position:
               
chr29:13553674-13554212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
48-624
               

               
Cow position:
               
chr29:41812041-41811477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
48-701
               

               
Cow position:
               
chr29:21443813-21443151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
48-707
               

               
Cow position:
               
chr29:7956432-7955792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
48-709
               

               
Cow position:
               
chr29:5062690-5063341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
49-218
               

               
Cow position:
               
chr29:5233137-5233310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-271
               

               
Cow position:
               
chr29:16185901-16185667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-273
               

               
Cow position:
               
chr29:13923845-13924081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr29:527070-526833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr29:13585971-13586208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr29:16152344-16152580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr29:18752000-18752237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr29:28656607-28656371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr29:32378338-32378575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr29:39214083-39213846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr29:40157511-40157748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-311
               

               
Cow position:
               
chr29:36209462-36209732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 216
               

               
Conread position:
               
49-316
               

               
Cow position:
               
chr29:9641688-9641968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
49-342
               

               
Cow position:
               
chr29:15570301-15570607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-353
               

               
Cow position:
               
chr29:28621738-28621429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr29:1688501-1688819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr29:10031886-10031568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr29:10122570-10122253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr29:10145710-10145392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr29:15116761-15116442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr29:15755400-15755082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr29:15936728-15936411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr29:16185012-16184696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr29:18561263-18560945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr29:21231315-21230995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr29:28578907-28579225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr29:35735853-35735535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-386
               

               
Cow position:
               
chr29:5935726-5936080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-386
               

               
Cow position:
               
chr29:26987098-26987453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-386
               

               
Cow position:
               
chr29:39047867-39048222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-390
               

               
Cow position:
               
chr29:37451845-37452195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr29:292254-292655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-436
               

               
Cow position:
               
chr29:30708014-30707625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-445
               

               
Cow position:
               
chr29:3973011-3972614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
49-449
               

               
Cow position:
               
chr29:18300252-18300666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:606881-606464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:1479218-1479634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:5426087-5425674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:6879168-6878750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:13128383-13127964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:14569063-14569480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:14611012-14611429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:15251616-15252033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:15767859-15767442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:15965787-15965370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:17077772-17078192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:21475215-21475632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:24013268-24013685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:24982804-24982388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:26633757-26633340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:27928130-27927713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:32353362-32353778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:32555980-32555566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:35264601-35264185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:38271774-38272192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:38409963-38410380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr29:38672326-38671908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:1911877-1911458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:6414048-6414467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:6455412-6455831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:7953596-7954015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:12898325-12898744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:13623607-13623188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:16785444-16785863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:18011338-18011757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:20014521-20014102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:21209700-21210119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:22341279-22341698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:32298491-32298910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:32329493-32329074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-454
               

               
Cow position:
               
chr29:34865354-34865773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-456
               

               
Cow position:
               
chr29:756869-756450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-456
               

               
Cow position:
               
chr29:15401222-15400803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-465
               

               
Cow position:
               
chr29:5977571-5977154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 77
               

               
Conread position:
               
49-469
               

               
Cow position:
               
chr29:735004-734577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-469
               

               
Cow position:
               
chr29:11118945-11118511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-472
               

               
Cow position:
               
chr29:36007928-36008365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-475
               

               
Cow position:
               
chr29:27702844-27703268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-481
               

               
Cow position:
               
chr29:38247218-38246770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
82, 236
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr29:4620711-4621157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr29:20593498-20593943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr29:24121323-24120880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr29:24728534-24728087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr29:31185142-31185587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-485
               

               
Cow position:
               
chr29:19925219-19924768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-486
               

               
Cow position:
               
chr29:2308813-2309257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 226
               

               
Conread position:
               
49-492
               

               
Cow position:
               
chr29:34780218-34779763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
49-505
               

               
Cow position:
               
chr29:21227742-21228206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-530
               

               
Cow position:
               
chr29:12005231-12004744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr29:727496-727998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr29:2401121-2401626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr29:3330349-3330854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr29:4611128-4611632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
49-576
               

               
Cow position:
               
chr29:2103608-2104146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
49-663
               

               
Cow position:
               
chr29:42771213-42771786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
49-728
               

               
Cow position:
               
chr29:45006082-45005413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
49-729
               

               
Cow position:
               
chr29:465865-465176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
50-255
               

               
Cow position:
               
chr29:29565572-29565355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
50-385
               

               
Cow position:
               
chr29:23980495-23980849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
50-466
               

               
Cow position:
               
chr29:44233405-44232990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
51-255
               

               
Cow position:
               
chr29:15902754-15902541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-270
               

               
Cow position:
               
chr29:10158759-10158561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
51-273
               

               
Cow position:
               
chr29:19891331-19891561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-301
               

               
Cow position:
               
chr29:10154803-10155059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
51-314
               

               
Cow position:
               
chr29:23240051-23240324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
51-318
               

               
Cow position:
               
chr29:37617691-37617966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-319
               

               
Cow position:
               
chr29:5187247-5186970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
51-321
               

               
Cow position:
               
chr29:4084603-4084885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
51-336
               

               
Cow position:
               
chr29:457510-457213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-338
               

               
Cow position:
               
chr29:10674551-10674848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
51-351
               

               
Cow position:
               
chr29:34551988-34552299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
51-354
               

               
Cow position:
               
chr29:25423373-25423676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
51-357
               

               
Cow position:
               
chr29:629172-629481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-362
               

               
Cow position:
               
chr29:8588968-8588644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-367
               

               
Cow position:
               
chr29:14116581-14116910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
51-385
               

               
Cow position:
               
chr29:29065963-29066311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-387
               

               
Cow position:
               
chr29:16501420-16501771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
67, 305
               

               
Conread position:
               
51-387
               

               
Cow position:
               
chr29:22949133-22948772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
51-389
               

               
Cow position:
               
chr29:1956554-1956196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
73, 147
               

               
Conread position:
               
51-392
               

               
Cow position:
               
chr29:3822393-3822736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
51-428
               

               
Cow position:
               
chr29:18749046-18748659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 183
               

               
Conread position:
               
51-430
               

               
Cow position:
               
chr29:686655-686262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
51-436
               

               
Cow position:
               
chr29:9332681-9333060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
51-436
               

               
Cow position:
               
chr29:38229769-38230168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-452
               

               
Cow position:
               
chr29:11696984-11697399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
51-452
               

               
Cow position:
               
chr29:11703559-11703978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
51-452
               

               
Cow position:
               
chr29:26161061-26160648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-453
               

               
Cow position:
               
chr29:9717188-9717600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr29:43957-43539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr29:6261778-6261373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 108
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr29:34793801-34793383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr29:40498111-40497701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-454
               

               
Cow position:
               
chr29:45208266-45208675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-469
               

               
Cow position:
               
chr29:7666494-7666066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 228
               

               
Conread position:
               
51-469
               

               
Cow position:
               
chr29:29477481-29477071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
51-475
               

               
Cow position:
               
chr29:9079035-9078603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
51-476
               

               
Cow position:
               
chr29:45650793-45650373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 152
               

               
Conread position:
               
51-481
               

               
Cow position:
               
chr29:10819946-10819507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:5238254-5238697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:5241164-5241607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:5550537-5550979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:7427372-7426931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:7811429-7810987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:8623467-8623029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:16347980-16348419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:18339000-18338563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:25927018-25926575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:28696625-28696190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:35076899-35077337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:38349592-38349153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
51-482
               

               
Cow position:
               
chr29:43327564-43328000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-491
               

               
Cow position:
               
chr29:29547797-29548226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
51-493
               

               
Cow position:
               
chr29:19514570-19514123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-523
               

               
Cow position:
               
chr29:12901565-12901093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 193
               

               
Conread position:
               
51-524
               

               
Cow position:
               
chr29:4327032-4327504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
51-530
               

               
Cow position:
               
chr29:17556-17089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
51-530
               

               
Cow position:
               
chr29:19792730-19792258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
51-536
               

               
Cow position:
               
chr29:6775449-6774971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-537
               

               
Cow position:
               
chr29:16067121-16067614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
51-569
               

               
Cow position:
               
chr29:3704646-3704140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 19
               

               
Conread position:
               
51-587
               

               
Cow position:
               
chr29:649799-650354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
51-606
               

               
Cow position:
               
chr29:6935252-6935815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-609
               

               
Cow position:
               
chr29:39567224-39567780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
51-610
               

               
Cow position:
               
chr29:9638776-9638221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-613
               

               
Cow position:
               
chr29:13590174-13589600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
51-631
               

               
Cow position:
               
chr29:22935823-22936391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-636
               

               
Cow position:
               
chr29:43495603-43496165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
51-642
               

               
Cow position:
               
chr29:32290139-32290743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-644
               

               
Cow position:
               
chr29:17408871-17409468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
51-644
               

               
Cow position:
               
chr29:26130330-26130906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-685
               

               
Cow position:
               
chr29:2188812-2188181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
51-696
               

               
Cow position:
               
chr29:13639817-13639184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
51-705
               

               
Cow position:
               
chr29:4480626-4479973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
51-706
               

               
Cow position:
               
chr29:2744734-2744074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
51-708
               

               
Cow position:
               
chr29:32942769-32943441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-709
               

               
Cow position:
               
chr29:19761811-19762461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
51-709
               

               
Cow position:
               
chr29:29056715-29057377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 7
               

               
Conread position:
               
51-709
               

               
Cow position:
               
chr29:36530400-36531064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-713
               

               
Cow position:
               
chr29:34746118-34745458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
51-717
               

               
Cow position:
               
chr29:21592249-21592905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
51-719
               

               
Cow position:
               
chr29:15944108-15944769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 19
               

               
Conread position:
               
51-720
               

               
Cow position:
               
chr29:26778425-26779086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 192
               

               
Conread position:
               
51-724
               

               
Cow position:
               
chr29:35434406-35435071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
51-728
               

               
Cow position:
               
chr29:1934024-1933353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
51-728
               

               
Cow position:
               
chr29:4120389-4121073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
51-728
               

               
Cow position:
               
chr29:4875369-4874673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
51-731
               

               
Cow position:
               
chr29:32800166-32799483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
51-732
               

               
Cow position:
               
chr29:39075667-39074949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
52-274
               

               
Cow position:
               
chr29:8681413-8681180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
52-384
               

               
Cow position:
               
chr29:21665512-21665854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
52-432
               

               
Cow position:
               
chr29:32644446-32644850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
52-448
               

               
Cow position:
               
chr29:38910472-38910056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
52-462
               

               
Cow position:
               
chr29:961461-961880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
52-709
               

               
Cow position:
               
chr29:1021809-1022492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
52-722
               

               
Cow position:
               
chr29:26334848-26334178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
53-240
               

               
Cow position:
               
chr29:355487-355676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
53-241
               

               
Cow position:
               
chr29:24730738-24730546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
53-271
               

               
Cow position:
               
chr29:4519505-4519735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
53-301
               

               
Cow position:
               
chr29:43009574-43009311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
53-364
               

               
Cow position:
               
chr29:15576520-15576200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
53-428
               

               
Cow position:
               
chr29:32732872-32733240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
53-429
               

               
Cow position:
               
chr29:41850265-41849886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
71, 88
               

               
Conread position:
               
53-453
               

               
Cow position:
               
chr29:13101680-13102084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
53-482
               

               
Cow position:
               
chr29:13107878-13108310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
53-635
               

               
Cow position:
               
chr29:20429425-20428840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
53-708
               

               
Cow position:
               
chr29:27833527-27834187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
53-719
               

               
Cow position:
               
chr29:40096503-40097191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
53-726
               

               
Cow position:
               
chr29:32963074-32963739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
53-727
               

               
Cow position:
               
chr29:3584586-3583897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
54-479
               

               
Cow position:
               
chr29:34736914-34736495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
55-384
               

               
Cow position:
               
chr29:18085115-18085477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
55-561
               

               
Cow position:
               
chr29:11136347-11135846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
56-356
               

               
Cow position:
               
chr29:34734639-34734329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
56-709
               

               
Cow position:
               
chr29:732167-732808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
57-530
               

               
Cow position:
               
chr29:11684543-11685025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
58-424
               

               
Cow position:
               
chr29:12674685-12675064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
62, 342
               

               
Conread position:
               
63-362
               

               
Cow position:
               
chr29:20594601-20594896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
63-454
               

               
Cow position:
               
chr29:11321801-11321401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
55, 168
               

               
Conread position:
               
63-480
               

               
Cow position:
               
chr29:33520441-33520003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
63-705
               

               
Cow position:
               
chr29:24952228-24952881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 221
               

               
Conread position:
               
64-436
               

               
Cow position:
               
chr29:16109906-16110293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
54, 336
               

               
Conread position:
               
65-454
               

               
Cow position:
               
chr29:9861318-9860916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 333
               

               
Conread position:
               
65-480
               

               
Cow position:
               
chr29:40014148-40013725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
65-493
               

               
Cow position:
               
chr29:4201668-4202108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 312
               

               
Conread position:
               
65-726
               

               
Cow position:
               
chr29:16609289-16609965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 160
               

               
Conread position:
               
66-731
               

               
Cow position:
               
chr29:1324988-1325667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 216
               

               
Conread position:
               
68-386
               

               
Cow position:
               
chr29:5786480-5786814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 217
               

               
Conread position:
               
70-473
               

               
Cow position:
               
chr29:42821340-42821755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
76, 50
               

               
Conread position:
               
70-510
               

               
Cow position:
               
chr29:28506648-28507105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
74-727
               

               
Cow position:
               
chr29:35291656-35292302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
75-353
               

               
Cow position:
               
chr29:8427044-8426763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
76-423
               

               
Cow position:
               
chr29:32308763-32308405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 322
               

               
Conread position:
               
86-529
               

               
Cow position:
               
chr29:18212395-18211977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 6
               

               
Conread position:
               
108-496
               

               
Cow position:
               
chr29:32808204-32808583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
113-436
               

               
Cow position:
               
chr29:603697-603385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 7
               

               
Conread position:
               
118-336
               

               
Cow position:
               
chr29:9864358-9864583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 177
               

               
Conread position:
               
122-226
               

               
Cow position:
               
chr29:478778-478881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
122-488
               

               
Cow position:
               
chr29:9686387-9686022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
123-460
               

               
Cow position:
               
chr29:10154162-10153834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
232, 44
               

               
Conread position:
               
131-339
               

               
Cow position:
               
chr29:27825875-27826082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
132-428
               

               
Cow position:
               
chr29:5897099-5896802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
153, 28
               

               
Conread position:
               
139-392
               

               
Cow position:
               
chr29:23541626-23541366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
139-530
               

               
Cow position:
               
chr29:37785549-37785154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
140-581
               

               
Cow position:
               
chr29:17795058-17795499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
145-385
               

               
Cow position:
               
chr29:16939649-16939894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
132, 118
               

               
Conread position:
               
145-390
               

               
Cow position:
               
chr29:34700158-34699928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
132, 7
               

               
Conread position:
               
145-428
               

               
Cow position:
               
chr29:18781509-18781788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
195, 7
               

               
Conread position:
               
145-488
               

               
Cow position:
               
chr29:27007762-27008099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 7
               

               
Conread position:
               
145-588
               

               
Cow position:
               
chr29:18072581-18073016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
145-717
               

               
Cow position:
               
chr29:24623884-24624448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
146-294
               

               
Cow position:
               
chr29:28503736-28503884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
130, 120
               

               
Conread position:
               
146-420
               

               
Cow position:
               
chr29:133833-134116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 245
               

               
Conread position:
               
146-435
               

               
Cow position:
               
chr29:29504708-29504429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
146-436
               

               
Cow position:
               
chr29:37719555-37719841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 120
               

               
Conread position:
               
146-517
               

               
Cow position:
               
chr29:8190835-8190461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
146-528
               

               
Cow position:
               
chr29:31926647-31926273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 160
               

               
Conread position:
               
146-727
               

               
Cow position:
               
chr29:20674165-20673592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 242
               

               
Conread position:
               
146-727
               

               
Cow position:
               
chr29:35459116-35458554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 87
               

               
Conread position:
               
146-729
               

               
Cow position:
               
chr29:29589271-29588708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
146-732
               

               
Cow position:
               
chr29:11398284-11397693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 131
               

               
Conread position:
               
149-387
               

               
Cow position:
               
chr29:14888767-14889011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
123, 144
               

               
Conread position:
               
149-387
               

               
Cow position:
               
chr29:16302651-16302419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
149-388
               

               
Cow position:
               
chr29:7959877-7959627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
149-390
               

               
Cow position:
               
chr29:8512868-8513104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
149-445
               

               
Cow position:
               
chr29:26519813-26519522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
149-637
               

               
Cow position:
               
chr29:12309643-12310134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 119
               

               
Conread position:
               
151-447
               

               
Cow position:
               
chr29:15041853-15042142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
152-251
               

               
Cow position:
               
chr29:21427934-21427835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-252
               

               
Cow position:
               
chr29:34774214-34774114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-259
               

               
Cow position:
               
chr29:26915828-26915935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-260
               

               
Cow position:
               
chr29:37486040-37486148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-262
               

               
Cow position:
               
chr29:40306351-40306241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-264
               

               
Cow position:
               
chr29:8493135-8493023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-274
               

               
Cow position:
               
chr29:6194340-6194218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-274
               

               
Cow position:
               
chr29:13853714-13853836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-274
               

               
Cow position:
               
chr29:32349660-32349538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-283
               

               
Cow position:
               
chr29:27694058-27693927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
152-291
               

               
Cow position:
               
chr29:14372625-14372485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
152-310
               

               
Cow position:
               
chr29:39108790-39108634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
152-323
               

               
Cow position:
               
chr29:561481-561653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
152-327
               

               
Cow position:
               
chr29:15257865-15258042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
152-330
               

               
Cow position:
               
chr29:27588340-27588513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
152-331
               

               
Cow position:
               
chr29:23703193-23703014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 73
               

               
Conread position:
               
152-331
               

               
Cow position:
               
chr29:38214994-38214819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
152-339
               

               
Cow position:
               
chr29:39331927-39331743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 115
               

               
Conread position:
               
152-351
               

               
Cow position:
               
chr29:16168388-16168188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
105, 174
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr29:2374354-2374152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
129, 154
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr29:2534317-2534520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr29:10200571-10200774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
126, 190
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr29:15808624-15808828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 191
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr29:21237109-21237311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr29:21619795-21619592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr29:26346286-26346490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr29:40330421-40330624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-364
               

               
Cow position:
               
chr29:8110209-8110002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
152-372
               

               
Cow position:
               
chr29:18963392-18963615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
152-376
               

               
Cow position:
               
chr29:27005534-27005759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
205, 216
               

               
Conread position:
               
152-380
               

               
Cow position:
               
chr29:3460470-3460702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
133, 209
               

               
Conread position:
               
152-386
               

               
Cow position:
               
chr29:23988448-23988698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
152-386
               

               
Cow position:
               
chr29:29632288-29632047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
152-386
               

               
Cow position:
               
chr29:40894590-40894820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
205, 90
               

               
Conread position:
               
152-387
               

               
Cow position:
               
chr29:30433330-30433570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 45
               

               
Conread position:
               
152-389
               

               
Cow position:
               
chr29:26223982-26224232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 198
               

               
Conread position:
               
152-392
               

               
Cow position:
               
chr29:4058162-4058407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 164
               

               
Conread position:
               
152-401
               

               
Cow position:
               
chr29:12571086-12571342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
152-402
               

               
Cow position:
               
chr29:11798810-11799065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
152-428
               

               
Cow position:
               
chr29:24945336-24945057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-432
               

               
Cow position:
               
chr29:26263504-26263772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
124, 105
               

               
Conread position:
               
152-432
               

               
Cow position:
               
chr29:30028782-30028498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
124, 212
               

               
Conread position:
               
152-434
               

               
Cow position:
               
chr29:26289437-26289159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
205, 232
               

               
Conread position:
               
152-436
               

               
Cow position:
               
chr29:32582037-32581747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
102, 194
               

               
Conread position:
               
152-436
               

               
Cow position:
               
chr29:42253862-42253576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr29:7799465-7799761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
124, 114
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr29:16694073-16694364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
124, 56
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr29:18724107-18723805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr29:19386069-19386371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr29:23448952-23448642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
124, 243
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr29:23763454-23763152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr29:24304223-24304525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr29:28990594-28990890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
133, 207
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr29:32317744-32318041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr29:35075574-35075272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
133, 190
               

               
Conread position:
               
152-452
               

               
Cow position:
               
chr29:40618087-40617777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr29:2483593-2483289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr29:2484944-2485248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr29:13876539-13876235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr29:24616282-24616586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr29:25775398-25775091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 167
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr29:25824597-25824900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
124, 99
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr29:32543999-32544303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
133, 237
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr29:34293520-34293216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr29:35455320-35455016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr29:39425134-39425438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-454
               

               
Cow position:
               
chr29:42413816-42414120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-459
               

               
Cow position:
               
chr29:20255045-20255354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
125, 114
               

               
Conread position:
               
152-465
               

               
Cow position:
               
chr29:6635753-6636058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 189
               

               
Conread position:
               
152-467
               

               
Cow position:
               
chr29:21528951-21529246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
152-468
               

               
Cow position:
               
chr29:2481683-2481378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 85
               

               
Conread position:
               
152-473
               

               
Cow position:
               
chr29:11072039-11071731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
174, 70
               

               
Conread position:
               
152-473
               

               
Cow position:
               
chr29:32655791-32655466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
70, 126
               

               
Conread position:
               
152-480
               

               
Cow position:
               
chr29:12798581-12798891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 84
               

               
Conread position:
               
152-480
               

               
Cow position:
               
chr29:16175622-16175297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 152
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr29:528641-528311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr29:9977412-9977081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr29:10643246-10642916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
133, 238
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr29:11696189-11696506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
134, 62
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr29:18772956-18772620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 229
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr29:24305069-24304738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr29:25695664-25695337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
133, 190
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr29:45624611-45624289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
152-488
               

               
Cow position:
               
chr29:26335729-26335394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 226
               

               
Conread position:
               
152-493
               

               
Cow position:
               
chr29:12610978-12611319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
133, 237
               

               
Conread position:
               
152-509
               

               
Cow position:
               
chr29:8125944-8125591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 114
               

               
Conread position:
               
152-510
               

               
Cow position:
               
chr29:26449982-26449622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-528
               

               
Cow position:
               
chr29:12451034-12451396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
136, 80
               

               
Conread position:
               
152-544
               

               
Cow position:
               
chr29:4649071-4648675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
152-544
               

               
Cow position:
               
chr29:5138882-5139277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
124, 113
               

               
Conread position:
               
152-544
               

               
Cow position:
               
chr29:15855441-15855828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
226, 120
               

               
Conread position:
               
152-573
               

               
Cow position:
               
chr29:26771075-26771501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 182
               

               
Conread position:
               
152-576
               

               
Cow position:
               
chr29:8935134-8935555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 148
               

               
Conread position:
               
152-582
               

               
Cow position:
               
chr29:19398832-19399265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
152-586
               

               
Cow position:
               
chr29:11365906-11366314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
284, 78
               

               
Conread position:
               
152-586
               

               
Cow position:
               
chr29:15940989-15940555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 238
               

               
Conread position:
               
152-605
               

               
Cow position:
               
chr29:3282346-3282792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
133, 231
               

               
Conread position:
               
152-621
               

               
Cow position:
               
chr29:6293815-6293370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 77
               

               
Conread position:
               
152-645
               

               
Cow position:
               
chr29:10156640-10156172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
152-645
               

               
Cow position:
               
chr29:25088384-25088876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 251
               

               
Conread position:
               
152-698
               

               
Cow position:
               
chr29:20933355-20933902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 40
               

               
Conread position:
               
152-705
               

               
Cow position:
               
chr29:10652988-10653516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 218
               

               
Conread position:
               
152-708
               

               
Cow position:
               
chr29:43328287-43328829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 23
               

               
Conread position:
               
152-711
               

               
Cow position:
               
chr29:35406136-35405590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
152-717
               

               
Cow position:
               
chr29:19756097-19756644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 205
               

               
Conread position:
               
152-718
               

               
Cow position:
               
chr29:21197001-21196444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 115
               

               
Conread position:
               
152-728
               

               
Cow position:
               
chr29:15738695-15738133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 139
               

               
Conread position:
               
152-728
               

               
Cow position:
               
chr29:21933477-21932903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 203
               

               
Conread position:
               
153-353
               

               
Cow position:
               
chr29:34530086-34530291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr29:32870887-32871126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 90
               

               
Conread position:
               
153-386
               

               
Cow position:
               
chr29:2715787-2716022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 193
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr29:13403315-13403555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
123, 113
               

               
Conread position:
               
153-391
               

               
Cow position:
               
chr29:16612302-16612060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
123, 82
               

               
Conread position:
               
153-393
               

               
Cow position:
               
chr29:27123703-27123453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
81, 144
               

               
Conread position:
               
153-454
               

               
Cow position:
               
chr29:7865913-7865610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
132, 236
               

               
Conread position:
               
153-568
               

               
Cow position:
               
chr29:17131967-17131562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
74, 221
               

               
Conread position:
               
153-592
               

               
Cow position:
               
chr29:40656338-40656779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
153-709
               

               
Cow position:
               
chr29:19428323-19428848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 69
               

               
Conread position:
               
153-710
               

               
Cow position:
               
chr29:5892500-5893045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 75
               

               
Conread position:
               
153-725
               

               
Cow position:
               
chr29:36586229-36586783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
153-728
               

               
Cow position:
               
chr29:23874107-23874679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
154-274
               

               
Cow position:
               
chr29:13903389-13903269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
154-346
               

               
Cow position:
               
chr29:29302374-29302183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 80
               

               
Conread position:
               
154-385
               

               
Cow position:
               
chr29:28113609-28113381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
154-422
               

               
Cow position:
               
chr29:15828571-15828305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
184, 232
               

               
Conread position:
               
154-480
               

               
Cow position:
               
chr29:42406314-42406648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
181, 112
               

               
Conread position:
               
155-330
               

               
Cow position:
               
chr29:26415753-26415929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
155-646
               

               
Cow position:
               
chr29:29512478-29512006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
204, 12
               

               
Conread position:
               
156-257
               

               
Cow position:
               
chr29:14500726-14500827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-264
               

               
Cow position:
               
chr29:11563150-11563042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-307
               

               
Cow position:
               
chr29:27873067-27873213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 69
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr29:28665454-28665628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
156-351
               

               
Cow position:
               
chr29:8968772-8968965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
129, 178
               

               
Conread position:
               
156-356
               

               
Cow position:
               
chr29:37268079-37267880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 186
               

               
Conread position:
               
156-380
               

               
Cow position:
               
chr29:4221039-4221261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
120, 74
               

               
Conread position:
               
156-385
               

               
Cow position:
               
chr29:20308123-20308360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
156-385
               

               
Cow position:
               
chr29:43499814-43499582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
156-386
               

               
Cow position:
               
chr29:45820594-45820376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
156-397
               

               
Cow position:
               
chr29:4890949-4890696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 166
               

               
Conread position:
               
156-422
               

               
Cow position:
               
chr29:40903066-40902804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 228
               

               
Conread position:
               
156-428
               

               
Cow position:
               
chr29:24420488-24420222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
130, 158
               

               
Conread position:
               
156-433
               

               
Cow position:
               
chr29:36633181-36632914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
127, 111
               

               
Conread position:
               
156-437
               

               
Cow position:
               
chr29:37470921-37470633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 239
               

               
Conread position:
               
156-445
               

               
Cow position:
               
chr29:26285375-26285096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
189, 57
               

               
Conread position:
               
156-452
               

               
Cow position:
               
chr29:28047538-28047241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
120, 186
               

               
Conread position:
               
156-454
               

               
Cow position:
               
chr29:903585-903884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
129, 186
               

               
Conread position:
               
156-454
               

               
Cow position:
               
chr29:10451914-10451612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
129, 186
               

               
Conread position:
               
156-461
               

               
Cow position:
               
chr29:5948134-5947838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
119, 203
               

               
Conread position:
               
156-469
               

               
Cow position:
               
chr29:2589246-2588930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 135
               

               
Conread position:
               
156-473
               

               
Cow position:
               
chr29:6925671-6925978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 105
               

               
Conread position:
               
156-473
               

               
Cow position:
               
chr29:40337879-40337562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 167
               

               
Conread position:
               
156-476
               

               
Cow position:
               
chr29:6217901-6217578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
42, 184
               

               
Conread position:
               
156-480
               

               
Cow position:
               
chr29:7041180-7040872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
120, 41
               

               
Conread position:
               
156-480
               

               
Cow position:
               
chr29:23119724-23119403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 126
               

               
Conread position:
               
156-482
               

               
Cow position:
               
chr29:12189484-12189160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
177, 129
               

               
Conread position:
               
156-487
               

               
Cow position:
               
chr29:29550976-29551298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
114, 66
               

               
Conread position:
               
156-488
               

               
Cow position:
               
chr29:2415154-2414833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 62
               

               
Conread position:
               
156-523
               

               
Cow position:
               
chr29:4524513-4524867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
156-576
               

               
Cow position:
               
chr29:16209496-16209079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
129, 233
               

               
Conread position:
               
156-584
               

               
Cow position:
               
chr29:28883733-28884154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 232
               

               
Conread position:
               
156-612
               

               
Cow position:
               
chr29:28868284-28868744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 234
               

               
Conread position:
               
156-614
               

               
Cow position:
               
chr29:26616083-26615614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 242
               

               
Conread position:
               
156-621
               

               
Cow position:
               
chr29:9911815-9912285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 190
               

               
Conread position:
               
156-621
               

               
Cow position:
               
chr29:17543103-17543553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 228
               

               
Conread position:
               
156-644
               

               
Cow position:
               
chr29:29974697-29975170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 51
               

               
Conread position:
               
156-656
               

               
Cow position:
               
chr29:856750-856256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
120, 110
               

               
Conread position:
               
156-705
               

               
Cow position:
               
chr29:28197355-28196826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 225
               

               
Conread position:
               
156-708
               

               
Cow position:
               
chr29:13028088-13028647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 110
               

               
Conread position:
               
156-709
               

               
Cow position:
               
chr29:28195863-28195335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 73
               

               
Conread position:
               
156-709
               

               
Cow position:
               
chr29:31786331-31786872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 170
               

               
Conread position:
               
156-710
               

               
Cow position:
               
chr29:35501992-35501466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
156-717
               

               
Cow position:
               
chr29:26017858-26017294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 136
               

               
Conread position:
               
156-728
               

               
Cow position:
               
chr29:10267484-10266911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
120, 97
               

               
Conread position:
               
156-728
               

               
Cow position:
               
chr29:43080955-43080392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
120, 82
               

               
Conread position:
               
157-383
               

               
Cow position:
               
chr29:36193014-36192785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
157-397
               

               
Cow position:
               
chr29:13040899-13040656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
157-473
               

               
Cow position:
               
chr29:2136445-2136145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
114, 186
               

               
Conread position:
               
157-544
               

               
Cow position:
               
chr29:25958046-25957661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
119, 185
               

               
Conread position:
               
157-545
               

               
Cow position:
               
chr29:42848884-42849256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 66
               

               
Conread position:
               
157-592
               

               
Cow position:
               
chr29:35484899-35485327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
157-606
               

               
Cow position:
               
chr29:28637407-28636974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 72
               

               
Conread position:
               
157-729
               

               
Cow position:
               
chr29:40117225-40117780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
158-325
               

               
Cow position:
               
chr29:31899365-31899200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
158-350
               

               
Cow position:
               
chr29:24669602-24669796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
158-351
               

               
Cow position:
               
chr29:11334841-11334649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
118, 184
               

               
Conread position:
               
158-356
               

               
Cow position:
               
chr29:45627218-45627413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
115, 64
               

               
Conread position:
               
158-361
               

               
Cow position:
               
chr29:21640068-21639866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
118, 184
               

               
Conread position:
               
158-376
               

               
Cow position:
               
chr29:6771641-6771868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
158-391
               

               
Cow position:
               
chr29:22339563-22339322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
158-392
               

               
Cow position:
               
chr29:11636819-11636581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 74
               

               
Conread position:
               
158-392
               

               
Cow position:
               
chr29:34535570-34535330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 190
               

               
Conread position:
               
158-424
               

               
Cow position:
               
chr29:37618822-37619079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
127, 182
               

               
Conread position:
               
158-458
               

               
Cow position:
               
chr29:19125015-19125295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
199, 120
               

               
Conread position:
               
158-473
               

               
Cow position:
               
chr29:21535032-21534709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
158-476
               

               
Cow position:
               
chr29:17041305-17041619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
158-509
               

               
Cow position:
               
chr29:35281158-35281495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 114
               

               
Conread position:
               
158-522
               

               
Cow position:
               
chr29:24345809-24345437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 241
               

               
Conread position:
               
158-606
               

               
Cow position:
               
chr29:28689265-28689709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 198
               

               
Conread position:
               
158-621
               

               
Cow position:
               
chr29:13127453-13127010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
158-635
               

               
Cow position:
               
chr29:36216774-36217236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 74
               

               
Conread position:
               
158-646
               

               
Cow position:
               
chr29:4367392-4367864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
158-691
               

               
Cow position:
               
chr29:38581624-38582150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 108
               

               
Conread position:
               
158-705
               

               
Cow position:
               
chr29:40583452-40583979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 190
               

               
Conread position:
               
158-709
               

               
Cow position:
               
chr29:1307208-1306665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
158-713
               

               
Cow position:
               
chr29:17109627-17110155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
158-717
               

               
Cow position:
               
chr29:28775793-28775270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
159-372
               

               
Cow position:
               
chr29:38858886-38859106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 106
               

               
Conread position:
               
159-586
               

               
Cow position:
               
chr29:17668162-17668562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
117, 76
               

               
Conread position:
               
159-621
               

               
Cow position:
               
chr29:17607072-17607526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 228
               

               
Conread position:
               
159-720
               

               
Cow position:
               
chr29:20462961-20462410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 183
               

               
Conread position:
               
160-382
               

               
Cow position:
               
chr29:17228069-17228291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
160-444
               

               
Cow position:
               
chr29:23569223-23568927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
73, 170
               

               
Conread position:
               
160-444
               

               
Cow position:
               
chr29:26290924-26290643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 62
               

               
Conread position:
               
160-445
               

               
Cow position:
               
chr29:1612915-1612636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
175, 17
               

               
Conread position:
               
160-464
               

               
Cow position:
               
chr29:29544924-29545228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 137
               

               
Conread position:
               
160-480
               

               
Cow position:
               
chr29:35300385-35300706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
116, 227
               

               
Conread position:
               
160-488
               

               
Cow position:
               
chr29:26980059-26980383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
160-644
               

               
Cow position:
               
chr29:26994922-26995384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
196, 78
               

               
Conread position:
               
161-325
               

               
Cow position:
               
chr29:41347209-41347370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
162-452
               

               
Cow position:
               
chr29:17773600-17773892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
162-465
               

               
Cow position:
               
chr29:37292432-37292738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
162-473
               

               
Cow position:
               
chr29:35630754-35630443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
162-500
               

               
Cow position:
               
chr29:8164207-8163862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
162-655
               

               
Cow position:
               
chr29:87354-86869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 48
               

               
Conread position:
               
163-384
               

               
Cow position:
               
chr29:30105961-30105740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 103
               

               
Conread position:
               
163-384
               

               
Cow position:
               
chr29:36356514-36356732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
114, 66
               

               
Conread position:
               
163-454
               

               
Cow position:
               
chr29:14207361-14207069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
122, 17
               

               
Conread position:
               
163-621
               

               
Cow position:
               
chr29:6014757-6015236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 144
               

               
Conread position:
               
163-731
               

               
Cow position:
               
chr29:20626237-20626787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 103
               

               
Conread position:
               
165-393
               

               
Cow position:
               
chr29:29121571-29121344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
169-290
               

               
Cow position:
               
chr29:25479328-25479450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
169-351
               

               
Cow position:
               
chr29:7560735-7560551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
169-371
               

               
Cow position:
               
chr29:7930392-7930186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
169-379
               

               
Cow position:
               
chr29:1582959-1582744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
172, 40
               

               
Conread position:
               
169-452
               

               
Cow position:
               
chr29:30695998-30695718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 216
               

               
Conread position:
               
169-469
               

               
Cow position:
               
chr29:7408224-7407925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
20, 220
               

               
Conread position:
               
169-606
               

               
Cow position:
               
chr29:8415600-8416030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 98
               

               
Conread position:
               
169-621
               

               
Cow position:
               
chr29:26990909-26991352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
169, 131
               

               
Conread position:
               
169-711
               

               
Cow position:
               
chr29:10058861-10058343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 160
               

               
Conread position:
               
169-715
               

               
Cow position:
               
chr29:40892048-40891503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 232
               

               
Conread position:
               
169-729
               

               
Cow position:
               
chr29:9709365-9709908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 97
               

               
Conread position:
               
171-479
               

               
Cow position:
               
chr29:36037380-36037673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 105
               

               
Conread position:
               
172-306
               

               
Cow position:
               
chr29:32176430-32176560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
174-465
               

               
Cow position:
               
chr29:19907031-19907314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
102, 51
               

               
Conread position:
               
176-391
               

               
Cow position:
               
chr29:16057132-16056908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
176-392
               

               
Cow position:
               
chr29:20616608-20616385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
176-395
               

               
Cow position:
               
chr29:26559844-26559629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
100, 53
               

               
Conread position:
               
176-488
               

               
Cow position:
               
chr29:8630399-8630094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 9
               

               
Conread position:
               
176-695
               

               
Cow position:
               
chr29:3368791-3368262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
176-710
               

               
Cow position:
               
chr29:10838624-10839138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 13
               

               
Conread position:
               
177-339
               

               
Cow position:
               
chr29:8645393-8645556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
177-454
               

               
Cow position:
               
chr29:13391195-13390916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 210
               

               
Conread position:
               
177-466
               

               
Cow position:
               
chr29:20178456-20178173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 187
               

               
Conread position:
               
177-469
               

               
Cow position:
               
chr29:18603873-18603579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
99, 165
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr29:22021111-22020806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
99, 210
               

               
Conread position:
               
177-492
               

               
Cow position:
               
chr29:28273711-28273403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
177-523
               

               
Cow position:
               
chr29:43312121-43311781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
99, 89
               

               
Conread position:
               
177-544
               

               
Cow position:
               
chr29:27976568-27976204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
179-454
               

               
Cow position:
               
chr29:1445700-1445977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 208
               

               
Conread position:
               
179-498
               

               
Cow position:
               
chr29:14037037-14036727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 180
               

               
Conread position:
               
180-732
               

               
Cow position:
               
chr29:16657368-16657912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 86
               

               
Conread position:
               
182-339
               

               
Cow position:
               
chr29:15289419-15289577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr29:3782805-3782632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
104, 160
               

               
Conread position:
               
182-606
               

               
Cow position:
               
chr29:32521542-32521965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 91
               

               
Conread position:
               
182-636
               

               
Cow position:
               
chr29:13372345-13372788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 50
               

               
Conread position:
               
183-469
               

               
Cow position:
               
chr29:43195673-43195957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
98, 200
               

               
Conread position:
               
185-575
               

               
Cow position:
               
chr29:2071886-2071507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 82
               

               
Conread position:
               
186-529
               

               
Cow position:
               
chr29:4328117-4328435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 103
               

               
Conread position:
               
187-454
               

               
Cow position:
               
chr29:2490577-2490846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
89, 200
               

               
Conread position:
               
188-436
               

               
Cow position:
               
chr29:21478629-21478379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 154
               

               
Conread position:
               
191-447
               

               
Cow position:
               
chr29:39446465-39446207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 196
               

               
Conread position:
               
191-524
               

               
Cow position:
               
chr29:44310340-44310015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
86, 47
               

               
Conread position:
               
191-726
               

               
Cow position:
               
chr29:4625305-4624783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 125
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr29:16171006-16170750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 149
               

               
Conread position:
               
194-454
               

               
Cow position:
               
chr29:21199772-21200030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
194-454
               

               
Cow position:
               
chr29:24650674-24650412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
91, 148
               

               
Conread position:
               
194-480
               

               
Cow position:
               
chr29:7848417-7848705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 99
               

               
Conread position:
               
194-637
               

               
Cow position:
               
chr29:10456861-10456450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 157
               

               
Conread position:
               
195-391
               

               
Cow position:
               
chr29:22720823-22721021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
195-468
               

               
Cow position:
               
chr29:13615957-13615675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
197-482
               

               
Cow position:
               
chr29:28128781-28128501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 186
               

               
Conread position:
               
198-462
               

               
Cow position:
               
chr29:34610027-34609765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
198-473
               

               
Cow position:
               
chr29:24197933-24197678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
198-524
               

               
Cow position:
               
chr29:26734728-26735041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 145
               

               
Conread position:
               
198-703
               

               
Cow position:
               
chr29:2644613-2644129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
198-712
               

               
Cow position:
               
chr29:14112070-14112580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
200-375
               

               
Cow position:
               
chr29:40960221-40960051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 136
               

               
Conread position:
               
200-454
               

               
Cow position:
               
chr29:35403848-35403592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 187
               

               
Conread position:
               
201-386
               

               
Cow position:
               
chr29:38760453-38760271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
203-452
               

               
Cow position:
               
chr29:28596247-28595997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 162
               

               
Conread position:
               
204-447
               

               
Cow position:
               
chr29:18877947-18878192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
174, 137
               

               
Conread position:
               
204-454
               

               
Cow position:
               
chr29:15841400-15841652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 183
               

               
Conread position:
               
205-379
               

               
Cow position:
               
chr29:29171337-29171508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 145
               

               
Conread position:
               
205-629
               

               
Cow position:
               
chr29:43252985-43252553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
206-621
               

               
Cow position:
               
chr29:37961269-37960866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
206-708
               

               
Cow position:
               
chr29:24033498-24033997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 185
               

               
Conread position:
               
207-637
               

               
Cow position:
               
chr29:45589881-45589469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
42, 124
               

               
Conread position:
               
210-392
               

               
Cow position:
               
chr29:28949814-28950001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
211-380
               

               
Cow position:
               
chr29:4087572-4087407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
212-709
               

               
Cow position:
               
chr29:14501306-14501793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
213-488
               

               
Cow position:
               
chr29:3395823-3396085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
213-544
               

               
Cow position:
               
chr29:9917673-9917344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 174
               

               
Conread position:
               
213-645
               

               
Cow position:
               
chr29:6844919-6844498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
214-709
               

               
Cow position:
               
chr29:699898-699430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 45
               

               
Conread position:
               
214-720
               

               
Cow position:
               
chr29:39111594-39111112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
216-709
               

               
Cow position:
               
chr29:750185-749693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
217-454
               

               
Cow position:
               
chr29:11114565-11114804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
59, 122
               

               
Conread position:
               
219-357
               

               
Cow position:
               
chr29:10296724-10296585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
219-497
               

               
Cow position:
               
chr29:27726210-27726472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
258, 38
               

               
Conread position:
               
222-383
               

               
Cow position:
               
chr29:45588753-45588590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 6
               

               
Conread position:
               
222-488
               

               
Cow position:
               
chr29:3502778-3503033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
222-490
               

               
Cow position:
               
chr29:479105-479366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 144
               

               
Conread position:
               
222-699
               

               
Cow position:
               
chr29:18878782-18878294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 162
               

               
Conread position:
               
222-709
               

               
Cow position:
               
chr29:11562332-11562824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
7, 143
               

               
Conread position:
               
223-706
               

               
Cow position:
               
chr29:42364294-42363824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
115, 42
               

               
Conread position:
               
224-439
               

               
Cow position:
               
chr29:17135572-17135779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
227-479
               

               
Cow position:
               
chr29:34360070-34359834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
227-530
               

               
Cow position:
               
chr29:35636148-35636453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
227-709
               

               
Cow position:
               
chr29:27816097-27816534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
229-386
               

               
Cow position:
               
chr29:577398-577239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
232-389
               

               
Cow position:
               
chr29:22957605-22957446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
232-451
               

               
Cow position:
               
chr29:26673174-26672960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
109, 34
               

               
Conread position:
               
232-646
               

               
Cow position:
               
chr29:7965982-7966378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
232-731
               

               
Cow position:
               
chr29:22069018-22068521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
233-386
               

               
Cow position:
               
chr29:5046544-5046392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 123
               

               
Conread position:
               
233-389
               

               
Cow position:
               
chr29:30844490-30844649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
233-451
               

               
Cow position:
               
chr29:40651342-40651125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
233-582
               

               
Cow position:
               
chr29:13634570-13634227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
235-466
               

               
Cow position:
               
chr29:4804965-4805192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 107
               

               
Conread position:
               
236-399
               

               
Cow position:
               
chr29:19601604-19601441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
236-401
               

               
Cow position:
               
chr29:2885714-2885550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr29:17965690-17965873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr29:32809195-32809367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
236-452
               

               
Cow position:
               
chr29:41182982-41182764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 150
               

               
Conread position:
               
236-462
               

               
Cow position:
               
chr29:36404554-36404778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 148
               

               
Conread position:
               
236-467
               

               
Cow position:
               
chr29:26129232-26129462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
236-472
               

               
Cow position:
               
chr29:2522311-2522534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
236-482
               

               
Cow position:
               
chr29:23743304-23743078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
236-523
               

               
Cow position:
               
chr29:30812483-30812763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 148
               

               
Conread position:
               
236-587
               

               
Cow position:
               
chr29:18694990-18695328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
41, 148
               

               
Conread position:
               
236-611
               

               
Cow position:
               
chr29:2984620-2984990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
236-612
               

               
Cow position:
               
chr29:5099029-5098665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 151
               

               
Conread position:
               
236-621
               

               
Cow position:
               
chr29:21924943-21925302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
236-711
               

               
Cow position:
               
chr29:12784223-12783756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 148
               

               
Conread position:
               
236-716
               

               
Cow position:
               
chr29:17463046-17462573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
236-728
               

               
Cow position:
               
chr29:16195585-16196072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
236-732
               

               
Cow position:
               
chr29:27668909-27668435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
337, 31
               

               
Conread position:
               
237-395
               

               
Cow position:
               
chr29:21265469-21265629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
237-478
               

               
Cow position:
               
chr29:4065822-4066057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
237-523
               

               
Cow position:
               
chr29:42268425-42268708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 152
               

               
Conread position:
               
237-529
               

               
Cow position:
               
chr29:94811-94540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
237-534
               

               
Cow position:
               
chr29:477841-478130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
237-594
               

               
Cow position:
               
chr29:24604414-24604053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
237-626
               

               
Cow position:
               
chr29:25333719-25333346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
237-632
               

               
Cow position:
               
chr29:19338713-19339122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 137
               

               
Conread position:
               
237-702
               

               
Cow position:
               
chr29:2263294-2262790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 273
               

               
Conread position:
               
237-710
               

               
Cow position:
               
chr29:12679890-12680357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
237-722
               

               
Cow position:
               
chr29:22175427-22175901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
238-461
               

               
Cow position:
               
chr29:29312781-29312565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
238-530
               

               
Cow position:
               
chr29:41747179-41747466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
238-722
               

               
Cow position:
               
chr29:41530585-41531062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 133
               

               
Conread position:
               
239-339
               

               
Cow position:
               
chr29:43516945-43516844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
239-451
               

               
Cow position:
               
chr29:4691950-4691733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 155
               

               
Conread position:
               
239-467
               

               
Cow position:
               
chr29:5919589-5919361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
239-586
               

               
Cow position:
               
chr29:40165978-40166319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
239-728
               

               
Cow position:
               
chr29:29769610-29769135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
239-731
               

               
Cow position:
               
chr29:8669091-8669576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 157
               

               
Conread position:
               
240-530
               

               
Cow position:
               
chr29:26329955-26330224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 24
               

               
Conread position:
               
240-567
               

               
Cow position:
               
chr29:4647249-4646936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
240-730
               

               
Cow position:
               
chr29:31928716-31929207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
241-626
               

               
Cow position:
               
chr29:37599466-37599105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
241-640
               

               
Cow position:
               
chr29:109448-109811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
242-428
               

               
Cow position:
               
chr29:44236207-44236393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
242-473
               

               
Cow position:
               
chr29:16756794-16757025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
242-578
               

               
Cow position:
               
chr29:9139147-9139488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 156
               

               
Conread position:
               
242-709
               

               
Cow position:
               
chr29:27009157-27009624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 147
               

               
Conread position:
               
242-709
               

               
Cow position:
               
chr29:29475508-29475055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
242-724
               

               
Cow position:
               
chr29:22613174-22613636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
242-728
               

               
Cow position:
               
chr29:3237620-3237131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 162
               

               
Conread position:
               
243-375
               

               
Cow position:
               
chr29:38731365-38731492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
243-481
               

               
Cow position:
               
chr29:21236856-21237089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
243-690
               

               
Cow position:
               
chr29:19389226-19389659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
244-532
               

               
Cow position:
               
chr29:35738529-35738252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 143
               

               
Conread position:
               
245-436
               

               
Cow position:
               
chr29:798713-798520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
245-488
               

               
Cow position:
               
chr29:4194379-4194136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
245-632
               

               
Cow position:
               
chr29:707203-706836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
245-727
               

               
Cow position:
               
chr29:34297823-34297355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 140
               

               
Conread position:
               
246-406
               

               
Cow position:
               
chr29:18521282-18521116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
246-469
               

               
Cow position:
               
chr29:32767774-32767560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
246-704
               

               
Cow position:
               
chr29:18021932-18021509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
247-606
               

               
Cow position:
               
chr29:23113423-23113772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
247-709
               

               
Cow position:
               
chr29:8926715-8926252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
247-713
               

               
Cow position:
               
chr29:17222152-17222619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
247-728
               

               
Cow position:
               
chr29:22162509-22162050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
248-621
               

               
Cow position:
               
chr29:356071-356431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
249-536
               

               
Cow position:
               
chr29:31594369-31594101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
250-487
               

               
Cow position:
               
chr29:585029-585256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
251-576
               

               
Cow position:
               
chr29:26725912-26726234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
251-634
               

               
Cow position:
               
chr29:1556680-1557054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
252-462
               

               
Cow position:
               
chr29:11787541-11787752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
253-568
               

               
Cow position:
               
chr29:18735893-18735582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
24, 135
               

               
Conread position:
               
253-645
               

               
Cow position:
               
chr29:40299257-40298888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
253-709
               

               
Cow position:
               
chr29:27858542-27858986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
253-728
               

               
Cow position:
               
chr29:11915567-11916040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
255-448
               

               
Cow position:
               
chr29:10659595-10659396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr29:23984212-23983858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
255-615
               

               
Cow position:
               
chr29:40852688-40853032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
256-484
               

               
Cow position:
               
chr29:36183029-36183258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
256-709
               

               
Cow position:
               
chr29:25737664-25737222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
256-718
               

               
Cow position:
               
chr29:3502309-3502769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 141
               

               
Conread position:
               
256-732
               

               
Cow position:
               
chr29:44378665-44378186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
257-594
               

               
Cow position:
               
chr29:10235361-10235051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
257-627
               

               
Cow position:
               
chr29:20903534-20903174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
20, 130
               

               
Conread position:
               
260-590
               

               
Cow position:
               
chr29:14615499-14615184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
261-584
               

               
Cow position:
               
chr29:16309508-16309816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
261-724
               

               
Cow position:
               
chr29:25474665-25475143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 227
               

               
Conread position:
               
262-530
               

               
Cow position:
               
chr29:24119978-24119722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 123
               

               
Conread position:
               
264-728
               

               
Cow position:
               
chr29:23844593-23845057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 135
               

               
Conread position:
               
265-528
               

               
Cow position:
               
chr29:42886142-42886407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
266-728
               

               
Cow position:
               
chr29:34744854-34744413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 117
               

               
Conread position:
               
267-390
               

               
Cow position:
               
chr29:17339532-17339407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
267-700
               

               
Cow position:
               
chr29:21706611-21706208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
267-707
               

               
Cow position:
               
chr29:22714964-22714514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
10, 122
               

               
Conread position:
               
267-729
               

               
Cow position:
               
chr29:4520099-4520547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 118
               

               
Conread position:
               
267-729
               

               
Cow position:
               
chr29:34773964-34773531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
283-529
               

               
Cow position:
               
chr29:2532842-2533076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
284-427
               

               
Cow position:
               
chr29:13458840-13458980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 97
               

               
Conread position:
               
284-480
               

               
Cow position:
               
chr29:3711168-3711365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
284-528
               

               
Cow position:
               
chr29:39642958-39643192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
284-594
               

               
Cow position:
               
chr29:868554-868858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
284-621
               

               
Cow position:
               
chr29:11704904-11705222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
284-626
               

               
Cow position:
               
chr29:6286376-6286046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
65, 100
               

               
Conread position:
               
284-692
               

               
Cow position:
               
chr29:19254041-19253648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
242, 111
               

               
Conread position:
               
284-710
               

               
Cow position:
               
chr29:23697760-23698169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 75
               

               
Conread position:
               
284-713
               

               
Cow position:
               
chr29:24292658-24293072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
284-728
               

               
Cow position:
               
chr29:19949091-19949526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 106
               

               
Conread position:
               
284-730
               

               
Cow position:
               
chr29:28739410-28739850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 72
               

               
Conread position:
               
285-530
               

               
Cow position:
               
chr29:1395388-1395615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
285-614
               

               
Cow position:
               
chr29:28446477-28446153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
285-620
               

               
Cow position:
               
chr29:463871-463543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
72, 99
               

               
Conread position:
               
285-693
               

               
Cow position:
               
chr29:5109428-5109001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
285-727
               

               
Cow position:
               
chr29:35677762-35677325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 68
               

               
Conread position:
               
286-524
               

               
Cow position:
               
chr29:5677568-5677801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 102
               

               
Conread position:
               
286-726
               

               
Cow position:
               
chr29:31489103-31489542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 99
               

               
Conread position:
               
287-530
               

               
Cow position:
               
chr29:14484761-14484519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
72, 109
               

               
Conread position:
               
287-586
               

               
Cow position:
               
chr29:24103764-24103466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
288-727
               

               
Cow position:
               
chr29:30440711-30441155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
289-593
               

               
Cow position:
               
chr29:44682304-44682022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
289-714
               

               
Cow position:
               
chr29:22778395-22777978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
290-709
               

               
Cow position:
               
chr29:38580763-38581190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
290-725
               

               
Cow position:
               
chr29:6337450-6337865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 67
               

               
Conread position:
               
294-488
               

               
Cow position:
               
chr29:709331-709138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 92
               

               
Conread position:
               
295-601
               

               
Cow position:
               
chr29:41364902-41365199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
296-727
               

               
Cow position:
               
chr29:26269862-26270284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
297-717
               

               
Cow position:
               
chr29:22690014-22690434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
44, 99
               

               
Conread position:
               
299-614
               

               
Cow position:
               
chr29:17154572-17154881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
180, 40
               

               
Conread position:
               
299-725
               

               
Cow position:
               
chr29:16617425-16617843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
300-626
               

               
Cow position:
               
chr29:43009287-43008969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 87
               

               
Conread position:
               
300-704
               

               
Cow position:
               
chr29:26259273-26259669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
302-726
               

               
Cow position:
               
chr29:11433922-11434328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
55, 81
               

               
Conread position:
               
303-680
               

               
Cow position:
               
chr29:3100461-3100096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
303-726
               

               
Cow position:
               
chr29:10818636-10818243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
304-725
               

               
Cow position:
               
chr29:377645-377223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
309-621
               

               
Cow position:
               
chr29:11054047-11053750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
229, 8
               

               
Conread position:
               
309-657
               

               
Cow position:
               
chr29:3726842-3727176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
309-714
               

               
Cow position:
               
chr29:28979673-28979313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
310-472
               

               
Cow position:
               
chr29:6870977-6870822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
310-602
               

               
Cow position:
               
chr29:30188533-30188261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
312-580
               

               
Cow position:
               
chr29:44988972-44988721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
313-636
               

               
Cow position:
               
chr29:11646914-11647219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
174, 40
               

               
Conread position:
               
314-621
               

               
Cow position:
               
chr29:4334539-4334828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
314-725
               

               
Cow position:
               
chr29:27652818-27652426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
317-716
               

               
Cow position:
               
chr29:20910886-20910484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
320-530
               

               
Cow position:
               
chr29:3539103-3538888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
37, 165
               

               
Conread position:
               
320-719
               

               
Cow position:
               
chr29:37618123-37618516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
324-636
               

               
Cow position:
               
chr29:28166391-28166097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
325-482
               

               
Cow position:
               
chr29:456972-456813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 139
               

               
Conread position:
               
325-704
               

               
Cow position:
               
chr29:43099918-43099556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
191, 5
               

               
Conread position:
               
325-726
               

               
Cow position:
               
chr29:5520691-5520270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 5
               

               
Conread position:
               
326-481
               

               
Cow position:
               
chr29:31899148-31898994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
326-643
               

               
Cow position:
               
chr29:29149489-29149803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
329-706
               

               
Cow position:
               
chr29:25091939-25092299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
330-591
               

               
Cow position:
               
chr29:24252066-24252315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
330-731
               

               
Cow position:
               
chr29:29942905-29942505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
335-705
               

               
Cow position:
               
chr29:4085152-4085490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
335-709
               

               
Cow position:
               
chr29:5409314-5408944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
335-709
               

               
Cow position:
               
chr29:17296968-17297336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 19
               

               
Conread position:
               
335-728
               

               
Cow position:
               
chr29:25267954-25268353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
340-726
               

               
Cow position:
               
chr29:363095-363464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
341-523
               

               
Cow position:
               
chr29:45383964-45384138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
342-640
               

               
Cow position:
               
chr29:23244040-23243749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
343-614
               

               
Cow position:
               
chr29:26416201-26416454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
343-719
               

               
Cow position:
               
chr29:31674471-31674839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
344-530
               

               
Cow position:
               
chr29:17301374-17301552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
344-724
               

               
Cow position:
               
chr29:2055902-2056274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 15
               

               
Conread position:
               
344-728
               

               
Cow position:
               
chr29:12025629-12025265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
345-708
               

               
Cow position:
               
chr29:40960005-40959646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
346-725
               

               
Cow position:
               
chr29:28396532-28396910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
346-727
               

               
Cow position:
               
chr29:10018418-10018784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
351-644
               

               
Cow position:
               
chr29:5275404-5275120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
183, 31
               

               
Conread position:
               
351-712
               

               
Cow position:
               
chr29:35084371-35084022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
172, 5
               

               
Conread position:
               
355-594
               

               
Cow position:
               
chr29:4052129-4051908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
356-523
               

               
Cow position:
               
chr29:40936358-40936196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
356-615
               

               
Cow position:
               
chr29:44008926-44008681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
356-645
               

               
Cow position:
               
chr29:29314799-29314526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
194, 26
               

               
Conread position:
               
356-680
               

               
Cow position:
               
chr29:29795532-29795211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
175, 26
               

               
Conread position:
               
356-687
               

               
Cow position:
               
chr29:7621714-7621382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
356-698
               

               
Cow position:
               
chr29:24045846-24046185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
175, 26
               

               
Conread position:
               
356-719
               

               
Cow position:
               
chr29:28805608-28805963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
356-728
               

               
Cow position:
               
chr29:16272581-16272961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 26
               

               
Conread position:
               
356-728
               

               
Cow position:
               
chr29:25814979-25814618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 26
               

               
Conread position:
               
358-458
               

               
Cow position:
               
chr29:7109088-7109185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
359-700
               

               
Cow position:
               
chr29:18462696-18462365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
359-709
               

               
Cow position:
               
chr29:36220386-36220741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 23
               

               
Conread position:
               
361-530
               

               
Cow position:
               
chr29:18580154-18579992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
113, 21
               

               
Conread position:
               
361-613
               

               
Cow position:
               
chr29:27329753-27329994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
160, 21
               

               
Conread position:
               
365-644
               

               
Cow position:
               
chr29:8176513-8176788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
166, 17
               

               
Conread position:
               
370-689
               

               
Cow position:
               
chr29:17168269-17168583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
181, 100
               

               
Conread position:
               
370-717
               

               
Cow position:
               
chr29:3825835-3826172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
370-725
               

               
Cow position:
               
chr29:28735175-28734831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
382-641
               

               
Cow position:
               
chr29:21941475-21941731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
144, 86
               

               
Conread position:
               
382-708
               

               
Cow position:
               
chr29:23389680-23389369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
266, 80
               

               
Conread position:
               
383-639
               

               
Cow position:
               
chr29:12626102-12625845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
133, 83
               

               
Conread position:
               
383-717
               

               
Cow position:
               
chr29:3685634-3685315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
143, 18
               

               
Conread position:
               
384-709
               

               
Cow position:
               
chr29:7624055-7624363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
385-682
               

               
Cow position:
               
chr29:7425517-7425802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
261, 75
               

               
Conread position:
               
387-642
               

               
Cow position:
               
chr29:32925979-32926234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
387-645
               

               
Cow position:
               
chr29:847761-847508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
387-698
               

               
Cow position:
               
chr29:34359099-34358792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
387-725
               

               
Cow position:
               
chr29:30227392-30227066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
261, 91
               

               
Conread position:
               
388-712
               

               
Cow position:
               
chr29:28814097-28813771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 90
               

               
Conread position:
               
388-712
               

               
Cow position:
               
chr29:38440125-38440458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
86, 118
               

               
Conread position:
               
390-607
               

               
Cow position:
               
chr29:11719848-11720063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
136, 102
               

               
Conread position:
               
390-712
               

               
Cow position:
               
chr29:29183609-29183924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 6
               

               
Conread position:
               
391-731
               

               
Cow position:
               
chr29:11611724-11612064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
123, 87
               

               
Conread position:
               
394-732
               

               
Cow position:
               
chr29:22647738-22648069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
137, 44
               

               
Conread position:
               
395-658
               

               
Cow position:
               
chr29:18404224-18403970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
159, 34
               

               
Conread position:
               
395-726
               

               
Cow position:
               
chr29:40995001-40994664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
396-727
               

               
Cow position:
               
chr29:1007706-1008036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
397-727
               

               
Cow position:
               
chr29:5046543-5046871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
401-709
               

               
Cow position:
               
chr29:26477434-26477742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
114, 70
               

               
Conread position:
               
401-728
               

               
Cow position:
               
chr29:28674812-28674485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
130, 62
               

               
Conread position:
               
403-616
               

               
Cow position:
               
chr29:24578755-24578968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
404-728
               

               
Cow position:
               
chr29:5831138-5830800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
405-709
               

               
Cow position:
               
chr29:1614824-1615125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
406-713
               

               
Cow position:
               
chr29:23813138-23812845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
407-709
               

               
Cow position:
               
chr29:20167322-20167621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
408-707
               

               
Cow position:
               
chr29:8293014-8292717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
119, 75
               

               
Conread position:
               
416-710
               

               
Cow position:
               
chr29:20770253-20770543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
231, 68
               

               
Conread position:
               
417-710
               

               
Cow position:
               
chr29:15947082-15947368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
418-709
               

               
Cow position:
               
chr29:21665999-21666284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
133, 53
               

               
Conread position:
               
420-726
               

               
Cow position:
               
chr29:32894182-32894472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
115, 48
               

               
Conread position:
               
421-717
               

               
Cow position:
               
chr29:16290645-16290929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
421-717
               

               
Cow position:
               
chr29:23155142-23155441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
422-718
               

               
Cow position:
               
chr29:414727-415024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
425-728
               

               
Cow position:
               
chr29:18754947-18754645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
426-727
               

               
Cow position:
               
chr29:22519210-22518907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
122, 42
               

               
Conread position:
               
427-645
               

               
Cow position:
               
chr29:13867291-13867075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
427-727
               

               
Cow position:
               
chr29:36248956-36249254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
431-646
               

               
Cow position:
               
chr29:7103480-7103693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
431-728
               

               
Cow position:
               
chr29:38348106-38347817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
432-710
               

               
Cow position:
               
chr29:22029032-22028762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
433-686
               

               
Cow position:
               
chr29:22184185-22184436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
434-725
               

               
Cow position:
               
chr29:32656359-32656650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
436-709
               

               
Cow position:
               
chr29:18450205-18449940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
440-728
               

               
Cow position:
               
chr29:39131530-39131240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
441-695
               

               
Cow position:
               
chr29:36632927-36632676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
441-703
               

               
Cow position:
               
chr29:44139311-44139053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
442-709
               

               
Cow position:
               
chr29:26540610-26540342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
442-722
               

               
Cow position:
               
chr29:27911527-27911803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 47
               

               
Conread position:
               
442-722
               

               
Cow position:
               
chr29:27926710-27926985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
442-722
               

               
Cow position:
               
chr29:31092384-31092659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
444-709
               

               
Cow position:
               
chr29:501137-501398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
446-709
               

               
Cow position:
               
chr29:29923636-29923378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
447-713
               

               
Cow position:
               
chr29:30681771-30681502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
450-727
               

               
Cow position:
               
chr29:22167138-22166874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
451-692
               

               
Cow position:
               
chr29:23825270-23825031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
463-728
               

               
Cow position:
               
chr29:5568443-5568709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
465-729
               

               
Cow position:
               
chr29:4070583-4070837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
191, 19
               

               
Conread position:
               
467-697
               

               
Cow position:
               
chr29:32197651-32197880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
468-728
               

               
Cow position:
               
chr29:39038312-39038051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
470-713
               

               
Cow position:
               
chr29:38858254-38858010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
472-728
               

               
Cow position:
               
chr29:8163869-8163610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
474-717
               

               
Cow position:
               
chr29:3549565-3549811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
475-711
               

               
Cow position:
               
chr29:7124774-7125022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
475-728
               

               
Cow position:
               
chr29:22720688-22720427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
477-718
               

               
Cow position:
               
chr29:30827371-30827615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
478-711
               

               
Cow position:
               
chr29:24188099-24187862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
478-728
               

               
Cow position:
               
chr29:25874504-25874252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
479-717
               

               
Cow position:
               
chr29:33321318-33321555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
169, 57
               

               
Conread position:
               
479-724
               

               
Cow position:
               
chr29:20527195-20526949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
480-710
               

               
Cow position:
               
chr29:36357098-36357327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
480-717
               

               
Cow position:
               
chr29:23637711-23637468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
481-728
               

               
Cow position:
               
chr29:28066461-28066697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
485-726
               

               
Cow position:
               
chr29:22735476-22735234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
486-709
               

               
Cow position:
               
chr29:22735131-22734908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
486-730
               

               
Cow position:
               
chr29:28420729-28420975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
489-692
               

               
Cow position:
               
chr29:22723578-22723777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
489-710
               

               
Cow position:
               
chr29:41112902-41112691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
495-717
               

               
Cow position:
               
chr29:38754956-38754732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
496-727
               

               
Cow position:
               
chr29:16200494-16200261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
500-709
               

               
Cow position:
               
chr29:36781316-36781112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
501-715
               

               
Cow position:
               
chr29:19363700-19363913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
502-705
               

               
Cow position:
               
chr29:22729558-22729759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
502-709
               

               
Cow position:
               
chr29:32656102-32655896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
504-709
               

               
Cow position:
               
chr29:19125314-19125528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
506-724
               

               
Cow position:
               
chr29:28204256-28204475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
140, 44
               

               
Conread position:
               
508-719
               

               
Cow position:
               
chr29:15797948-15798159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
512-728
               

               
Cow position:
               
chr29:20087380-20087163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
512-731
               

               
Cow position:
               
chr29:32713161-32713384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
515-726
               

               
Cow position:
               
chr29:26211055-26211268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
516-695
               

               
Cow position:
               
chr29:24365892-24365713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
518-705
               

               
Cow position:
               
chr29:26539241-26539425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
518-705
               

               
Cow position:
               
chr29:41422901-41422715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 19
               

               
Conread position:
               
521-709
               

               
Cow position:
               
chr29:28715226-28715033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
525-717
               

               
Cow position:
               
chr29:20685184-20685378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
123, 25
               

               
Conread position:
               
526-710
               

               
Cow position:
               
chr29:32215725-32215903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
122, 13
               

               
Conread position:
               
526-713
               

               
Cow position:
               
chr29:3292964-3293145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
526-728
               

               
Cow position:
               
chr29:30021135-30021338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
526-728
               

               
Cow position:
               
chr29:40351059-40350861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
533-706
               

               
Cow position:
               
chr29:23819367-23819189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
539-708
               

               
Cow position:
               
chr29:33143325-33143159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
542-728
               

               
Cow position:
               
chr29:41014597-41014786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
549-720
               

               
Cow position:
               
chr29:16561732-16561564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
124, 39
               

               
Conread position:
               
550-705
               

               
Cow position:
               
chr29:43088347-43088500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
550-709
               

               
Cow position:
               
chr29:19420574-19420422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
99, 81
               

               
Conread position:
               
550-709
               

               
Cow position:
               
chr29:35259024-35259179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 75
               

               
Conread position:
               
550-710
               

               
Cow position:
               
chr29:7414540-7414693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
550-713
               

               
Cow position:
               
chr29:629577-629739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 111
               

               
Conread position:
               
550-713
               

               
Cow position:
               
chr29:23142295-23142130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-713
               

               
Cow position:
               
chr29:42404986-42405151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
80, 97
               

               
Conread position:
               
550-716
               

               
Cow position:
               
chr29:19187065-19187231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 78
               

               
Conread position:
               
550-717
               

               
Cow position:
               
chr29:25907285-25907460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
550-720
               

               
Cow position:
               
chr29:30920364-30920190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 120
               

               
Conread position:
               
550-723
               

               
Cow position:
               
chr29:14828189-14828017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
550-723
               

               
Cow position:
               
chr29:22577140-22576967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
550-724
               

               
Cow position:
               
chr29:4441165-4440989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
550-726
               

               
Cow position:
               
chr29:6517268-6517443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
550-726
               

               
Cow position:
               
chr29:11894737-11894917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
550-726
               

               
Cow position:
               
chr29:23678748-23678916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
550-726
               

               
Cow position:
               
chr29:35189646-35189824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-726
               

               
Cow position:
               
chr29:38732192-38732372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
550-727
               

               
Cow position:
               
chr29:396445-396618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr29:936246-936420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 69
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr29:14746819-14746996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 81
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr29:22019148-22018966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr29:34356007-34356189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
551-711
               

               
Cow position:
               
chr29:685133-684977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
551-725
               

               
Cow position:
               
chr29:30294833-30294657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
551-725
               

               
Cow position:
               
chr29:34359781-34359609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
147, 82
               

               
Conread position:
               
551-726
               

               
Cow position:
               
chr29:25432493-25432669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
99, 118
               

               
Conread position:
               
551-728
               

               
Cow position:
               
chr29:14576899-14577071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
552-711
               

               
Cow position:
               
chr29:34675968-34675806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 105
               

               
Conread position:
               
552-712
               

               
Cow position:
               
chr29:24604937-24605097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
95, 74
               

               
Conread position:
               
552-717
               

               
Cow position:
               
chr29:5953818-5953650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
552-717
               

               
Cow position:
               
chr29:16438738-16438565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 66
               

               
Conread position:
               
552-717
               

               
Cow position:
               
chr29:16735265-16735432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
552-719
               

               
Cow position:
               
chr29:3538635-3538474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
552-722
               

               
Cow position:
               
chr29:22534002-22534174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
552-724
               

               
Cow position:
               
chr29:22776120-22776289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
552-726
               

               
Cow position:
               
chr29:4327634-4327799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 104
               

               
Conread position:
               
552-728
               

               
Cow position:
               
chr29:4484137-4484317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
96, 85
               

               
Conread position:
               
552-728
               

               
Cow position:
               
chr29:4648168-4647991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
554-726
               

               
Cow position:
               
chr29:36546739-36546567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 74
               

               
Conread position:
               
557-716
               

               
Cow position:
               
chr29:11081350-11081186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
557-728
               

               
Cow position:
               
chr29:8605889-8605722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 102
               

               
Conread position:
               
557-732
               

               
Cow position:
               
chr29:23735042-23734864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
559-728
               

               
Cow position:
               
chr29:42887017-42887188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
560-710
               

               
Cow position:
               
chr29:8841396-8841250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 77
               

               
Conread position:
               
560-725
               

               
Cow position:
               
chr29:24119451-24119284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
561-728
               

               
Cow position:
               
chr29:7285504-7285670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
76, 86
               

               
Conread position:
               
562-717
               

               
Cow position:
               
chr29:35281515-35281678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
563-728
               

               
Cow position:
               
chr29:6441630-6441797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 84
               

               
Conread position:
               
565-723
               

               
Cow position:
               
chr29:18577500-18577655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
568-717
               

               
Cow position:
               
chr29:4741334-4741183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
582-728
               

               
Cow position:
               
chr29:26777079-26777227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
588-717
               

               
Cow position:
               
chr29:41844175-41844044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               
Show alignments to all cow chromosomes.