Cow genome map
| Conread name: | Ss1.1-Thy1-THY010096F02.5 | 
| Conread position: | 7-452 | 
| Cow position: | chr6:31568166-31567707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 111, 100 | 
| Conread position: | 31-261 | 
| Cow position: | chr6:51968720-51968963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 7, 19 | 
| Conread position: | 44-462 | 
| Cow position: | chr6:46205590-46206013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 19 | 
| Conread position: | 45-386 | 
| Cow position: | chr6:14064085-14063734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 5 | 
| Conread position: | 46-354 | 
| Cow position: | chr6:40975886-40976204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 74, 23 | 
| Conread position: | 46-454 | 
| Cow position: | chr6:181820-181413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 80, 24 | 
| Conread position: | 46-454 | 
| Cow position: | chr6:20552531-20552110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 74, 24 | 
| Conread position: | 46-609 | 
| Cow position: | chr6:43789648-43789076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 72, 24 | 
| Conread position: | 47-454 | 
| Cow position: | chr6:25218503-25218922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 77, 22 | 
| Conread position: | 47-482 | 
| Cow position: | chr6:8753735-8753289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 73, 23 | 
| Conread position: | 48-327 | 
| Cow position: | chr6:42420842-42421127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 81, 15 | 
| Conread position: | 48-350 | 
| Cow position: | chr6:40497146-40497466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 68, 21 | 
| Conread position: | 48-353 | 
| Cow position: | chr6:366790-367108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 72, 22 | 
| Conread position: | 48-353 | 
| Cow position: | chr6:20689748-20689436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 76, 22 | 
| Conread position: | 48-356 | 
| Cow position: | chr6:19103184-19102864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 307 | 
| Conread position: | 48-370 | 
| Cow position: | chr6:39137215-39137549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 61, 22 | 
| Conread position: | 48-379 | 
| Cow position: | chr6:37761963-37762314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 57, 23 | 
| Conread position: | 48-426 | 
| Cow position: | chr6:44578820-44578434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 75, 24 | 
| Conread position: | 48-426 | 
| Cow position: | chr6:46681383-46681770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 72, 22 | 
| Conread position: | 48-450 | 
| Cow position: | chr6:49794682-49795098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 70, 22 | 
| Conread position: | 48-452 | 
| Cow position: | chr6:21831936-21831528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 72, 22 | 
| Conread position: | 48-452 | 
| Cow position: | chr6:43049735-43050151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 70, 22 | 
| Conread position: | 48-452 | 
| Cow position: | chr6:53271378-53271796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 70, 22 | 
| Conread position: | 48-452 | 
| Cow position: | chr6:65862260-65862677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 23 | 
| Conread position: | 48-461 | 
| Cow position: | chr6:10605258-10605684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 22 | 
| Conread position: | 48-469 | 
| Cow position: | chr6:28065712-28066151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 70, 30 | 
| Conread position: | 48-482 | 
| Cow position: | chr6:2875312-2874874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 22 | 
| Conread position: | 48-482 | 
| Cow position: | chr6:16618744-16619162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 77, 15 | 
| Conread position: | 48-482 | 
| Cow position: | chr6:19570207-19569768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 70, 22 | 
| Conread position: | 48-509 | 
| Cow position: | chr6:47540099-47540571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 22 | 
| Conread position: | 48-519 | 
| Cow position: | chr6:60456405-60456878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 22 | 
| Conread position: | 48-524 | 
| Cow position: | chr6:50120211-50119728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 22 | 
| Conread position: | 48-530 | 
| Cow position: | chr6:16410778-16411251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 22 | 
| Conread position: | 48-530 | 
| Cow position: | chr6:44372374-44371885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 503 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 22 | 
| Conread position: | 48-707 | 
| Cow position: | chr6:38770877-38771508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 457 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 70 | 
| Conread position: | 48-709 | 
| Cow position: | chr6:143785-143139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 682 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 76, 22 | 
| Conread position: | 48-723 | 
| Cow position: | chr6:27852132-27851448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 707 | 
| Alignm identity: | 467 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 15 | 
| Conread position: | 48-726 | 
| Cow position: | chr6:6201053-6201689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 692 | 
| Alignm identity: | 483 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 22 | 
| Conread position: | 49-245 | 
| Cow position: | chr6:66433494-66433699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 82, 21 | 
| Conread position: | 49-255 | 
| Cow position: | chr6:27477577-27477796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 71, 21 | 
| Conread position: | 49-258 | 
| Cow position: | chr6:44598326-44598105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-273 | 
| Cow position: | chr6:39080642-39080878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-274 | 
| Cow position: | chr6:8284051-8283815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 69, 20 | 
| Conread position: | 49-274 | 
| Cow position: | chr6:11185149-11185386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-274 | 
| Cow position: | chr6:13597444-13597207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-274 | 
| Cow position: | chr6:14929169-14929405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-274 | 
| Cow position: | chr6:19707154-19707391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-274 | 
| Cow position: | chr6:19712520-19712288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-274 | 
| Cow position: | chr6:20268254-20268489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-274 | 
| Cow position: | chr6:26771397-26771159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-274 | 
| Cow position: | chr6:45747283-45747045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 49-274 | 
| Cow position: | chr6:50755598-50755835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-274 | 
| Cow position: | chr6:59076987-59076749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-274 | 
| Cow position: | chr6:63714564-63714328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-336 | 
| Cow position: | chr6:25374383-25374083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-339 | 
| Cow position: | chr6:30708472-30708169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-339 | 
| Cow position: | chr6:65016314-65016012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 87, 21 | 
| Conread position: | 49-344 | 
| Cow position: | chr6:58390299-58389992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-347 | 
| Cow position: | chr6:11032618-11032309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-349 | 
| Cow position: | chr6:33466680-33466988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 71, 20 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:9321005-9321327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 71, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:12998141-12998459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:26667299-26666981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:27093862-27093545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:27152400-27152718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:27173566-27173884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 73, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:41158596-41158278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:41835025-41835343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:43039637-43039952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:60066048-60066366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:61051398-61051080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:61549002-61548684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 71, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:63040610-63040292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-356 | 
| Cow position: | chr6:65863049-65863367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 50, 21 | 
| Conread position: | 49-361 | 
| Cow position: | chr6:22628003-22627680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-361 | 
| Cow position: | chr6:64097076-64096753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-361 | 
| Cow position: | chr6:65818506-65818186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-362 | 
| Cow position: | chr6:55266049-55265729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 71, 20 | 
| Conread position: | 49-386 | 
| Cow position: | chr6:25207161-25207516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-409 | 
| Cow position: | chr6:10266410-10266037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 71, 21 | 
| Conread position: | 49-422 | 
| Cow position: | chr6:43621744-43622131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-426 | 
| Cow position: | chr6:60516305-60516701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 21 | 
| Conread position: | 49-428 | 
| Cow position: | chr6:58940646-58940254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-436 | 
| Cow position: | chr6:6568509-6568116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-436 | 
| Cow position: | chr6:11020383-11020784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-436 | 
| Cow position: | chr6:18803334-18802934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-436 | 
| Cow position: | chr6:19819169-19819570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 69, 22 | 
| Conread position: | 49-436 | 
| Cow position: | chr6:22043285-22042887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 71, 21 | 
| Conread position: | 49-436 | 
| Cow position: | chr6:43955277-43955678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-436 | 
| Cow position: | chr6:47674699-47675098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 69, 20 | 
| Conread position: | 49-436 | 
| Cow position: | chr6:55388462-55388862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-447 | 
| Cow position: | chr6:2867735-2867323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-447 | 
| Cow position: | chr6:18418877-18418465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-447 | 
| Cow position: | chr6:28294100-28293688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-447 | 
| Cow position: | chr6:36901735-36902147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-447 | 
| Cow position: | chr6:41470642-41471054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-449 | 
| Cow position: | chr6:2089983-2090397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:76716-76300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:2389952-2389536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:2668733-2668322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:3152937-3153352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:7449220-7449637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 73, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:7466926-7466510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:9226243-9226658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:12947777-12947362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:13307673-13307264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 52, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:13489119-13489538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:13945588-13946005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:16049571-16049161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:16417966-16417551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:16645596-16646013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:19515575-19515992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:21712431-21712848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 74, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:22736981-22736568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:23567883-23567466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:24262842-24263259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 69, 30 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:26830252-26830664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:31520163-31520580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:31548854-31548439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:31752627-31753037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:33489509-33489093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:34016998-34016581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 22 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:38257549-38257163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 227, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:40251079-40250663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 71, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:40278777-40279194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:43921361-43921771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:44146226-44145806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:45591870-45592291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:45938004-45938420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:46948537-46948954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 99, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:49963438-49963025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:51869662-51870076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:53542744-53542328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:53740016-53740434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:54202319-54201903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:54886890-54886473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:56080192-56079777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:67403643-67403226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-452 | 
| Cow position: | chr6:67818625-67818208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:444203-443784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:6557596-6558015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:10013522-10013941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:10865665-10866084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:11402045-11402463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:12972121-12972540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:13531389-13531808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:14389001-14388582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:18649188-18648770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:20174107-20174526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:20581054-20580635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:21164028-21164447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:25095599-25096018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:25363276-25363695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:27541286-27541705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:36258679-36259098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:37736645-37737064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:38917314-38916895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:41823112-41822693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:45694586-45695005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:45751658-45752077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:45765396-45764977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:45976224-45976643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:46607782-46607365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 69, 10 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:52482070-52482489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:55361681-55362098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:55720893-55721312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:56441355-56440936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:56888137-56888547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-454 | 
| Cow position: | chr6:63177845-63178264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-456 | 
| Cow position: | chr6:12662608-12662184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 22, 308 | 
| Conread position: | 49-456 | 
| Cow position: | chr6:28000671-28000252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-456 | 
| Cow position: | chr6:45901268-45900847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-469 | 
| Cow position: | chr6:14198372-14198803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-469 | 
| Cow position: | chr6:18503089-18502655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-469 | 
| Cow position: | chr6:40449943-40449508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 41, 13 | 
| Conread position: | 49-469 | 
| Cow position: | chr6:59052143-59052577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-471 | 
| Cow position: | chr6:41232189-41232620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 71, 29 | 
| Conread position: | 49-471 | 
| Cow position: | chr6:66304263-66303834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 22 | 
| Conread position: | 49-475 | 
| Cow position: | chr6:28486936-28486496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-476 | 
| Cow position: | chr6:48169520-48169955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 21 | 
| Conread position: | 49-479 | 
| Cow position: | chr6:57521900-57522344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-480 | 
| Cow position: | chr6:19719295-19719744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-480 | 
| Cow position: | chr6:21857461-21857907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-481 | 
| Cow position: | chr6:25410181-25410629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-481 | 
| Cow position: | chr6:45723400-45722947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 69, 249 | 
| Conread position: | 49-482 | 
| Cow position: | chr6:1797350-1797796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 30 | 
| Conread position: | 49-482 | 
| Cow position: | chr6:11869211-11868766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 71, 14 | 
| Conread position: | 49-482 | 
| Cow position: | chr6:18912009-18911565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 73, 21 | 
| Conread position: | 49-482 | 
| Cow position: | chr6:23879334-23878884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-482 | 
| Cow position: | chr6:52424596-52425042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-482 | 
| Cow position: | chr6:55239415-55239862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-482 | 
| Cow position: | chr6:67553955-67554402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-491 | 
| Cow position: | chr6:327638-327176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-492 | 
| Cow position: | chr6:33884358-33883907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-524 | 
| Cow position: | chr6:23987164-23986691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 75, 21 | 
| Conread position: | 49-544 | 
| Cow position: | chr6:2196409-2196918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-544 | 
| Cow position: | chr6:2898487-2898992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-544 | 
| Cow position: | chr6:9235237-9235742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-544 | 
| Cow position: | chr6:11453142-11452637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-544 | 
| Cow position: | chr6:20215671-20215160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 517 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-544 | 
| Cow position: | chr6:25375983-25376489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-544 | 
| Cow position: | chr6:28184596-28184091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-544 | 
| Cow position: | chr6:33863331-33863842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-544 | 
| Cow position: | chr6:37217364-37217848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 227, 21 | 
| Conread position: | 49-544 | 
| Cow position: | chr6:38061337-38061841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-544 | 
| Cow position: | chr6:49579822-49580327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-544 | 
| Cow position: | chr6:49684991-49684486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 518 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-545 | 
| Cow position: | chr6:59834803-59835309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-698 | 
| Cow position: | chr6:46292754-46292127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 224 | 
| Conread position: | 49-709 | 
| Cow position: | chr6:54979234-54979905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 69, 21 | 
| Conread position: | 49-726 | 
| Cow position: | chr6:17414878-17414196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 703 | 
| Alignm identity: | 481 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 21 | 
| Conread position: | 50-452 | 
| Cow position: | chr6:3095382-3094964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 22, 351 | 
| Conread position: | 50-452 | 
| Cow position: | chr6:17632044-17631627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 68, 20 | 
| Conread position: | 50-469 | 
| Cow position: | chr6:58594542-58594104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 80, 360 | 
| Conread position: | 50-476 | 
| Cow position: | chr6:39088348-39088784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 21 | 
| Conread position: | 51-227 | 
| Cow position: | chr6:7009320-7009502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 87, 19 | 
| Conread position: | 51-253 | 
| Cow position: | chr6:1637230-1637015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 69, 20 | 
| Conread position: | 51-253 | 
| Cow position: | chr6:52697343-52697557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 54, 19 | 
| Conread position: | 51-254 | 
| Cow position: | chr6:479273-479488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-255 | 
| Cow position: | chr6:1834721-1834934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-258 | 
| Cow position: | chr6:50571895-50572114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-274 | 
| Cow position: | chr6:49444845-49445078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-274 | 
| Cow position: | chr6:51468042-51468272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-298 | 
| Cow position: | chr6:7835607-7835857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 73, 20 | 
| Conread position: | 51-306 | 
| Cow position: | chr6:55762967-55763232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 73, 19 | 
| Conread position: | 51-311 | 
| Cow position: | chr6:27887648-27887907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 87, 19 | 
| Conread position: | 51-314 | 
| Cow position: | chr6:38233570-38233836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 94, 19 | 
| Conread position: | 51-317 | 
| Cow position: | chr6:33451548-33451822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-322 | 
| Cow position: | chr6:56651942-56651659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 55, 47 | 
| Conread position: | 51-322 | 
| Cow position: | chr6:62015223-62015506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 19 | 
| Conread position: | 51-331 | 
| Cow position: | chr6:27240386-27240111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 99, 19 | 
| Conread position: | 51-351 | 
| Cow position: | chr6:7174923-7174621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 32, 42 | 
| Conread position: | 51-353 | 
| Cow position: | chr6:4389439-4389741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 69, 18 | 
| Conread position: | 51-353 | 
| Cow position: | chr6:10682319-10682639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-354 | 
| Cow position: | chr6:3885780-3885465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-354 | 
| Cow position: | chr6:33509160-33509474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 104, 12 | 
| Conread position: | 51-354 | 
| Cow position: | chr6:46584861-46585177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 69, 20 | 
| Conread position: | 51-357 | 
| Cow position: | chr6:17050097-17050412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-362 | 
| Cow position: | chr6:5851846-5851532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-378 | 
| Cow position: | chr6:6471193-6470852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 82, 19 | 
| Conread position: | 51-382 | 
| Cow position: | chr6:24243012-24243348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 69, 37 | 
| Conread position: | 51-384 | 
| Cow position: | chr6:66513490-66513147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 86, 164 | 
| Conread position: | 51-385 | 
| Cow position: | chr6:2074225-2074571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 73, 21 | 
| Conread position: | 51-391 | 
| Cow position: | chr6:7253861-7253490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 65, 19 | 
| Conread position: | 51-391 | 
| Cow position: | chr6:38594924-38594572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 40, 19 | 
| Conread position: | 51-391 | 
| Cow position: | chr6:45155700-45156041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 57, 21 | 
| Conread position: | 51-392 | 
| Cow position: | chr6:5501219-5500855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 77, 20 | 
| Conread position: | 51-392 | 
| Cow position: | chr6:57473972-57474312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 34, 20 | 
| Conread position: | 51-392 | 
| Cow position: | chr6:61162286-61162642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 73, 20 | 
| Conread position: | 51-397 | 
| Cow position: | chr6:56501890-56502242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 76, 18 | 
| Conread position: | 51-399 | 
| Cow position: | chr6:12515728-12516089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 80, 20 | 
| Conread position: | 51-412 | 
| Cow position: | chr6:60017651-60018013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 27 | 
| Conread position: | 51-425 | 
| Cow position: | chr6:38900180-38899788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 81, 20 | 
| Conread position: | 51-427 | 
| Cow position: | chr6:28559014-28559386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 28 | 
| Conread position: | 51-430 | 
| Cow position: | chr6:52627187-52627580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 81, 20 | 
| Conread position: | 51-432 | 
| Cow position: | chr6:28322594-28322225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-432 | 
| Cow position: | chr6:49411099-49410725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 98, 20 | 
| Conread position: | 51-436 | 
| Cow position: | chr6:12623048-12623441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 19 | 
| Conread position: | 51-436 | 
| Cow position: | chr6:24125695-24125311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 102, 19 | 
| Conread position: | 51-437 | 
| Cow position: | chr6:17111439-17111041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-437 | 
| Cow position: | chr6:17122116-17122511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-437 | 
| Cow position: | chr6:24074977-24074589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 69, 20 | 
| Conread position: | 51-439 | 
| Cow position: | chr6:9375784-9375394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 19 | 
| Conread position: | 51-439 | 
| Cow position: | chr6:46666684-46667086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 19 | 
| Conread position: | 51-445 | 
| Cow position: | chr6:55903816-55904218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 64, 19 | 
| Conread position: | 51-446 | 
| Cow position: | chr6:11288741-11288331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-447 | 
| Cow position: | chr6:1278934-1278528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 55, 47 | 
| Conread position: | 51-447 | 
| Cow position: | chr6:53345374-53345779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 19 | 
| Conread position: | 51-452 | 
| Cow position: | chr6:9737537-9737127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 19 | 
| Conread position: | 51-452 | 
| Cow position: | chr6:43999433-43999017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 67, 304 | 
| Conread position: | 51-453 | 
| Cow position: | chr6:25790011-25789592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 351 | 
| Conread position: | 51-454 | 
| Cow position: | chr6:706721-707138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-454 | 
| Cow position: | chr6:27526278-27525862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-454 | 
| Cow position: | chr6:36532002-36532418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-454 | 
| Cow position: | chr6:40549974-40549557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 67, 19 | 
| Conread position: | 51-454 | 
| Cow position: | chr6:41193074-41193491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 72, 20 | 
| Conread position: | 51-454 | 
| Cow position: | chr6:51296623-51296225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 234, 20 | 
| Conread position: | 51-454 | 
| Cow position: | chr6:51718282-51718699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-454 | 
| Cow position: | chr6:60877022-60877439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-454 | 
| Cow position: | chr6:64720874-64721282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 72, 19 | 
| Conread position: | 51-456 | 
| Cow position: | chr6:7137615-7137197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 20 | 
| Conread position: | 51-456 | 
| Cow position: | chr6:39998754-39998335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-456 | 
| Cow position: | chr6:51877481-51877898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 72, 227 | 
| Conread position: | 51-458 | 
| Cow position: | chr6:58439569-58439954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 69 | 
| Conread position: | 51-459 | 
| Cow position: | chr6:13741275-13741697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 19 | 
| Conread position: | 51-460 | 
| Cow position: | chr6:12387748-12387330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 19 | 
| Conread position: | 51-464 | 
| Cow position: | chr6:12629596-12630024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 18 | 
| Conread position: | 51-466 | 
| Cow position: | chr6:32211048-32210627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 19 | 
| Conread position: | 51-469 | 
| Cow position: | chr6:51733808-51734233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-471 | 
| Cow position: | chr6:2012600-2013024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 19 | 
| Conread position: | 51-473 | 
| Cow position: | chr6:15046517-15046072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 19 | 
| Conread position: | 51-473 | 
| Cow position: | chr6:25358654-25359078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 19 | 
| Conread position: | 51-473 | 
| Cow position: | chr6:44098665-44099096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 19 | 
| Conread position: | 51-476 | 
| Cow position: | chr6:40358151-40357713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 69, 351 | 
| Conread position: | 51-477 | 
| Cow position: | chr6:54218245-54218689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 98, 19 | 
| Conread position: | 51-479 | 
| Cow position: | chr6:16593672-16594095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 98, 19 | 
| Conread position: | 51-480 | 
| Cow position: | chr6:14839448-14839011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 19 | 
| Conread position: | 51-480 | 
| Cow position: | chr6:67544715-67544278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-482 | 
| Cow position: | chr6:8205914-8206356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 19 | 
| Conread position: | 51-482 | 
| Cow position: | chr6:35873008-35872565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-487 | 
| Cow position: | chr6:16675394-16675822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 64, 19 | 
| Conread position: | 51-487 | 
| Cow position: | chr6:60485265-60485717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 20 | 
| Conread position: | 51-488 | 
| Cow position: | chr6:1174924-1174462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 12 | 
| Conread position: | 51-509 | 
| Cow position: | chr6:22877573-22877117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 19 | 
| Conread position: | 51-519 | 
| Cow position: | chr6:6721699-6722154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 71, 20 | 
| Conread position: | 51-520 | 
| Cow position: | chr6:3979084-3978612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 19 | 
| Conread position: | 51-522 | 
| Cow position: | chr6:606840-607313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 19 | 
| Conread position: | 51-524 | 
| Cow position: | chr6:6614017-6614491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 56, 19 | 
| Conread position: | 51-530 | 
| Cow position: | chr6:36928228-36928721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 20 | 
| Conread position: | 51-541 | 
| Cow position: | chr6:34075603-34076099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 19 | 
| Conread position: | 51-544 | 
| Cow position: | chr6:10044933-10045435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 67, 19 | 
| Conread position: | 51-544 | 
| Cow position: | chr6:24757771-24757273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 71, 19 | 
| Conread position: | 51-576 | 
| Cow position: | chr6:3271754-3271240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-576 | 
| Cow position: | chr6:38872801-38872272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-576 | 
| Cow position: | chr6:47039484-47038973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-576 | 
| Cow position: | chr6:48872629-48872102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-589 | 
| Cow position: | chr6:56842737-56843274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 19 | 
| Conread position: | 51-593 | 
| Cow position: | chr6:58747788-58748342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 565 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 20 | 
| Conread position: | 51-603 | 
| Cow position: | chr6:27870332-27870911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 71, 19 | 
| Conread position: | 51-605 | 
| Cow position: | chr6:6182000-6181432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 575 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 55, 20 | 
| Conread position: | 51-606 | 
| Cow position: | chr6:25822421-25821871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 571 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 94, 20 | 
| Conread position: | 51-606 | 
| Cow position: | chr6:55040640-55040077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 19 | 
| Conread position: | 51-613 | 
| Cow position: | chr6:1887070-1886523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 581 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 20 | 
| Conread position: | 51-613 | 
| Cow position: | chr6:35613833-35613273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 19 | 
| Conread position: | 51-637 | 
| Cow position: | chr6:6068110-6067533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 615 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 27 | 
| Conread position: | 51-637 | 
| Cow position: | chr6:36652001-36652591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 612 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 19 | 
| Conread position: | 51-645 | 
| Cow position: | chr6:46570703-46571282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 610 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 20 | 
| Conread position: | 51-663 | 
| Cow position: | chr6:67214322-67214943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 19 | 
| Conread position: | 51-684 | 
| Cow position: | chr6:8210004-8209391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 19 | 
| Conread position: | 51-695 | 
| Cow position: | chr6:51834980-51835623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 19 | 
| Conread position: | 51-695 | 
| Cow position: | chr6:54647948-54647274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 684 | 
| Alignm identity: | 462 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 20 | 
| Conread position: | 51-705 | 
| Cow position: | chr6:13366876-13367517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 458 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 21 | 
| Conread position: | 51-705 | 
| Cow position: | chr6:32269275-32268652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 79, 19 | 
| Conread position: | 51-709 | 
| Cow position: | chr6:2607191-2607847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 480 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 19 | 
| Conread position: | 51-709 | 
| Cow position: | chr6:7131270-7130622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 688 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 19 | 
| Conread position: | 51-709 | 
| Cow position: | chr6:8636853-8637506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 460 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 19 | 
| Conread position: | 51-709 | 
| Cow position: | chr6:16765815-16765159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 681 | 
| Alignm identity: | 460 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-709 | 
| Cow position: | chr6:33460669-33461345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 694 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 19 | 
| Conread position: | 51-709 | 
| Cow position: | chr6:49707021-49706357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-709 | 
| Cow position: | chr6:65711404-65712058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 684 | 
| Alignm identity: | 461 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 19 | 
| Conread position: | 51-709 | 
| Cow position: | chr6:65870604-65871270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 682 | 
| Alignm identity: | 467 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 18 | 
| Conread position: | 51-710 | 
| Cow position: | chr6:23695575-23696234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 472 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 19 | 
| Conread position: | 51-710 | 
| Cow position: | chr6:32287197-32287871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 704 | 
| Alignm identity: | 488 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 20 | 
| Conread position: | 51-711 | 
| Cow position: | chr6:28147833-28148505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 19 | 
| Conread position: | 51-713 | 
| Cow position: | chr6:16699848-16700498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 488 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 19 | 
| Conread position: | 51-713 | 
| Cow position: | chr6:32867628-32866978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 682 | 
| Alignm identity: | 471 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 18 | 
| Conread position: | 51-716 | 
| Cow position: | chr6:46465405-46466063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 468 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 19 | 
| Conread position: | 51-717 | 
| Cow position: | chr6:5095973-5095295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 690 | 
| Alignm identity: | 504 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 19 | 
| Conread position: | 51-717 | 
| Cow position: | chr6:15938267-15937604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 690 | 
| Alignm identity: | 493 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 185, 19 | 
| Conread position: | 51-717 | 
| Cow position: | chr6:24030952-24031608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 695 | 
| Alignm identity: | 476 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 19 | 
| Conread position: | 51-717 | 
| Cow position: | chr6:63252322-63251674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 19 | 
| Conread position: | 51-719 | 
| Cow position: | chr6:1770617-1769945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 694 | 
| Alignm identity: | 477 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 19 | 
| Conread position: | 51-725 | 
| Cow position: | chr6:20451683-20452367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 700 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-726 | 
| Cow position: | chr6:53178214-53178882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 699 | 
| Alignm identity: | 475 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 230 | 
| Conread position: | 51-726 | 
| Cow position: | chr6:67187273-67187934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 695 | 
| Alignm identity: | 469 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 21 | 
| Conread position: | 51-727 | 
| Cow position: | chr6:35181670-35180997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 693 | 
| Alignm identity: | 501 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 49 | 
| Conread position: | 51-727 | 
| Cow position: | chr6:52478866-52478154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 719 | 
| Alignm identity: | 499 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 450 | 
| Conread position: | 51-727 | 
| Cow position: | chr6:61488944-61489577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 684 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 49, 9 | 
| Conread position: | 51-728 | 
| Cow position: | chr6:10332531-10331838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 716 | 
| Alignm identity: | 495 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 19 | 
| Conread position: | 51-728 | 
| Cow position: | chr6:15275514-15274821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 708 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 19 | 
| Conread position: | 51-728 | 
| Cow position: | chr6:53933270-53932586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 713 | 
| Alignm identity: | 501 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 19 | 
| Conread position: | 51-728 | 
| Cow position: | chr6:64431524-64432194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 699 | 
| Alignm identity: | 502 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 19 | 
| Conread position: | 52-362 | 
| Cow position: | chr6:43394260-43394571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 97, 18 | 
| Conread position: | 52-391 | 
| Cow position: | chr6:25783885-25784244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 71, 18 | 
| Conread position: | 52-452 | 
| Cow position: | chr6:28700837-28700423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 66, 18 | 
| Conread position: | 52-452 | 
| Cow position: | chr6:57308949-57309363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 66, 19 | 
| Conread position: | 52-454 | 
| Cow position: | chr6:47827-47417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 68, 18 | 
| Conread position: | 52-466 | 
| Cow position: | chr6:48807419-48806994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 36, 18 | 
| Conread position: | 52-476 | 
| Cow position: | chr6:54293713-54294119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 18 | 
| Conread position: | 52-574 | 
| Cow position: | chr6:3575015-3575548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 54, 299 | 
| Conread position: | 52-613 | 
| Cow position: | chr6:18049449-18048883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 309 | 
| Conread position: | 52-700 | 
| Cow position: | chr6:39093345-39093975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 675 | 
| Alignm identity: | 457 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 18 | 
| Conread position: | 52-709 | 
| Cow position: | chr6:49422170-49421557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 663 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 97, 18 | 
| Conread position: | 52-717 | 
| Cow position: | chr6:40031772-40032426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 685 | 
| Alignm identity: | 500 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 20 | 
| Conread position: | 52-726 | 
| Cow position: | chr6:18987800-18988447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 693 | 
| Alignm identity: | 488 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 18 | 
| Conread position: | 53-233 | 
| Cow position: | chr6:59620219-59620412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 74, 17 | 
| Conread position: | 53-318 | 
| Cow position: | chr6:20245663-20245941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 67, 17 | 
| Conread position: | 53-339 | 
| Cow position: | chr6:19170863-19171163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 53, 46 | 
| Conread position: | 53-353 | 
| Cow position: | chr6:18955454-18955141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 77, 17 | 
| Conread position: | 53-367 | 
| Cow position: | chr6:8599367-8599697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 17 | 
| Conread position: | 53-386 | 
| Cow position: | chr6:52001954-52002295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 76, 17 | 
| Conread position: | 53-436 | 
| Cow position: | chr6:64426767-64427168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 63, 17 | 
| Conread position: | 53-437 | 
| Cow position: | chr6:49626934-49627335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 65, 18 | 
| Conread position: | 53-454 | 
| Cow position: | chr6:1817286-1816875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 67, 17 | 
| Conread position: | 53-454 | 
| Cow position: | chr6:2185773-2185359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 67, 17 | 
| Conread position: | 53-454 | 
| Cow position: | chr6:17935447-17935032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 65, 17 | 
| Conread position: | 53-454 | 
| Cow position: | chr6:55538546-55538133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 15, 218 | 
| Conread position: | 53-469 | 
| Cow position: | chr6:22507330-22507744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 67, 19 | 
| Conread position: | 53-523 | 
| Cow position: | chr6:16737600-16738072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 19 | 
| Conread position: | 53-530 | 
| Cow position: | chr6:18961941-18961455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 18 | 
| Conread position: | 53-594 | 
| Cow position: | chr6:47026056-47026602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 78, 17 | 
| Conread position: | 53-616 | 
| Cow position: | chr6:14696792-14696218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 17 | 
| Conread position: | 53-704 | 
| Cow position: | chr6:29484691-29485317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 671 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 17 | 
| Conread position: | 54-472 | 
| Cow position: | chr6:10695440-10695874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 16 | 
| Conread position: | 54-521 | 
| Cow position: | chr6:9733251-9732790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 16 | 
| Conread position: | 54-704 | 
| Cow position: | chr6:5302819-5302168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 187 | 
| Conread position: | 55-349 | 
| Cow position: | chr6:42106465-42106165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 79, 15 | 
| Conread position: | 55-524 | 
| Cow position: | chr6:5958434-5957974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 15 | 
| Conread position: | 56-392 | 
| Cow position: | chr6:208730-209060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 84, 15 | 
| Conread position: | 57-272 | 
| Cow position: | chr6:2324619-2324382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 31, 13 | 
| Conread position: | 57-407 | 
| Cow position: | chr6:2088241-2088609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 63, 213 | 
| Conread position: | 57-454 | 
| Cow position: | chr6:6578191-6577780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 13 | 
| Conread position: | 57-460 | 
| Cow position: | chr6:52556891-52556480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 82 | 
| Conread position: | 57-493 | 
| Cow position: | chr6:60166768-60166299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 88, 13 | 
| Conread position: | 58-357 | 
| Cow position: | chr6:222854-222530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 71, 12 | 
| Conread position: | 58-446 | 
| Cow position: | chr6:6596169-6596562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 14, 74 | 
| Conread position: | 58-489 | 
| Cow position: | chr6:45617861-45617413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 74, 13 | 
| Conread position: | 62-709 | 
| Cow position: | chr6:32125654-32126291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 460 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 338 | 
| Conread position: | 62-728 | 
| Cow position: | chr6:66363658-66362975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 691 | 
| Alignm identity: | 458 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 325 | 
| Conread position: | 63-275 | 
| Cow position: | chr6:34405237-34405021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 53, 208 | 
| Conread position: | 63-312 | 
| Cow position: | chr6:21590319-21590567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 83, 63 | 
| Conread position: | 63-454 | 
| Cow position: | chr6:2110526-2110123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 61, 152 | 
| Conread position: | 63-455 | 
| Cow position: | chr6:28791421-28791827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 20, 157 | 
| Conread position: | 64-258 | 
| Cow position: | chr6:28636439-28636232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 64-356 | 
| Cow position: | chr6:31192738-31192433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 54, 292 | 
| Conread position: | 64-356 | 
| Cow position: | chr6:51150635-51150937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 54, 212 | 
| Conread position: | 64-386 | 
| Cow position: | chr6:55205851-55205521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 83, 15 | 
| Conread position: | 64-450 | 
| Cow position: | chr6:1784176-1783792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 161 | 
| Conread position: | 64-482 | 
| Cow position: | chr6:31081639-31082058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 54, 290 | 
| Conread position: | 64-482 | 
| Cow position: | chr6:56926811-56927218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 10, 56 | 
| Conread position: | 64-544 | 
| Cow position: | chr6:757961-758454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 84, 55 | 
| Conread position: | 65-274 | 
| Cow position: | chr6:15310273-15310051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 65-356 | 
| Cow position: | chr6:5751572-5751873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 53, 222 | 
| Conread position: | 65-398 | 
| Cow position: | chr6:66751475-66751821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 67, 91 | 
| Conread position: | 65-454 | 
| Cow position: | chr6:1910906-1911312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 12, 337 | 
| Conread position: | 65-456 | 
| Cow position: | chr6:62323442-62323031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 65-460 | 
| Cow position: | chr6:11638149-11637759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 22 | 
| Conread position: | 65-463 | 
| Cow position: | chr6:32916329-32915926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 287 | 
| Conread position: | 65-464 | 
| Cow position: | chr6:24327551-24327142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 234 | 
| Conread position: | 65-480 | 
| Cow position: | chr6:28343241-28343665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 55, 197 | 
| Conread position: | 66-465 | 
| Cow position: | chr6:41824237-41823821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 337 | 
| Conread position: | 67-378 | 
| Cow position: | chr6:7801771-7801446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 31 | 
| Conread position: | 68-380 | 
| Cow position: | chr6:52216162-52215843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 61, 231 | 
| Conread position: | 68-380 | 
| Cow position: | chr6:52235653-52235334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 61, 231 | 
| Conread position: | 68-621 | 
| Cow position: | chr6:35103728-35103176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 9 | 
| Conread position: | 71-621 | 
| Cow position: | chr6:9009003-9008460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 32 | 
| Conread position: | 71-709 | 
| Cow position: | chr6:49442702-49443337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 49 | 
| Conread position: | 72-572 | 
| Cow position: | chr6:6768872-6769383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 521 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 277 | 
| Conread position: | 72-645 | 
| Cow position: | chr6:66532188-66531648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 54 | 
| Conread position: | 72-713 | 
| Cow position: | chr6:47574525-47575134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 49 | 
| Conread position: | 74-436 | 
| Cow position: | chr6:38994042-38993665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 50, 307 | 
| Conread position: | 82-353 | 
| Cow position: | chr6:68272514-68272236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 67, 38 | 
| Conread position: | 85-494 | 
| Cow position: | chr6:55688661-55689074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 35 | 
| Conread position: | 89-530 | 
| Cow position: | chr6:5672860-5673307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 187, 34 | 
| Conread position: | 93-592 | 
| Cow position: | chr6:60673180-60673688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 517 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 14 | 
| Conread position: | 118-606 | 
| Cow position: | chr6:54980758-54981246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 157, 224 | 
| Conread position: | 122-424 | 
| Cow position: | chr6:40320338-40320646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 27, 35 | 
| Conread position: | 122-530 | 
| Cow position: | chr6:52248479-52248072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 35 | 
| Conread position: | 123-390 | 
| Cow position: | chr6:16518195-16517927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 17, 30 | 
| Conread position: | 125-713 | 
| Cow position: | chr6:5609803-5609199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 622 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 284 | 
| Conread position: | 127-306 | 
| Cow position: | chr6:119643-119823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 43, 16 | 
| Conread position: | 127-521 | 
| Cow position: | chr6:20231160-20230775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 0 | 
| Conread position: | 128-290 | 
| Cow position: | chr6:35260512-35260677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 129-353 | 
| Cow position: | chr6:47773547-47773316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 95, 23 | 
| Conread position: | 129-454 | 
| Cow position: | chr6:1293600-1293287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 12, 75 | 
| Conread position: | 131-345 | 
| Cow position: | chr6:56596945-56597159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 192, 26 | 
| Conread position: | 133-454 | 
| Cow position: | chr6:8526967-8527290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 143, 254 | 
| Conread position: | 136-274 | 
| Cow position: | chr6:34393741-34393604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 137-487 | 
| Cow position: | chr6:50042781-50043131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 138-480 | 
| Cow position: | chr6:21300843-21300502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 147, 17 | 
| Conread position: | 140-386 | 
| Cow position: | chr6:29284374-29284622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 129, 10 | 
| Conread position: | 140-489 | 
| Cow position: | chr6:42693042-42693403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 101, 12 | 
| Conread position: | 141-313 | 
| Cow position: | chr6:62979562-62979394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 135, 11 | 
| Conread position: | 141-380 | 
| Cow position: | chr6:68127131-68127379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 141-703 | 
| Cow position: | chr6:12337664-12338223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 573 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 125 | 
| Conread position: | 142-451 | 
| Cow position: | chr6:45775717-45775413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 143, 124 | 
| Conread position: | 143-351 | 
| Cow position: | chr6:52308016-52308228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 93, 7 | 
| Conread position: | 143-452 | 
| Cow position: | chr6:11455974-11455663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 133, 199 | 
| Conread position: | 143-593 | 
| Cow position: | chr6:7312273-7312717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 101, 75 | 
| Conread position: | 143-717 | 
| Cow position: | chr6:18080833-18080269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 248 | 
| Conread position: | 143-719 | 
| Cow position: | chr6:43345773-43345190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 93 | 
| Conread position: | 144-514 | 
| Cow position: | chr6:58172869-58173229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 18, 12 | 
| Conread position: | 144-709 | 
| Cow position: | chr6:15242520-15243078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 12 | 
| Conread position: | 145-265 | 
| Cow position: | chr6:31927734-31927850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 145-454 | 
| Cow position: | chr6:28172904-28173213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 130, 8 | 
| Conread position: | 145-523 | 
| Cow position: | chr6:59508031-59508410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 28, 7 | 
| Conread position: | 146-313 | 
| Cow position: | chr6:33949317-33949144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 146-317 | 
| Cow position: | chr6:46529098-46529268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 146-355 | 
| Cow position: | chr6:68252468-68252676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 130, 196 | 
| Conread position: | 146-362 | 
| Cow position: | chr6:54841219-54840995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 56, 194 | 
| Conread position: | 146-380 | 
| Cow position: | chr6:11789086-11789322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 115, 229 | 
| Conread position: | 146-402 | 
| Cow position: | chr6:16397498-16397245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 185 | 
| Conread position: | 146-416 | 
| Cow position: | chr6:50625296-50625559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 41, 151 | 
| Conread position: | 146-452 | 
| Cow position: | chr6:5367001-5366693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 130, 196 | 
| Conread position: | 146-454 | 
| Cow position: | chr6:58031807-58032114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 139, 78 | 
| Conread position: | 146-454 | 
| Cow position: | chr6:66566140-66566449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 139, 120 | 
| Conread position: | 146-469 | 
| Cow position: | chr6:57597315-57596989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 61, 182 | 
| Conread position: | 146-473 | 
| Cow position: | chr6:33852099-33851789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 128, 0 | 
| Conread position: | 146-493 | 
| Cow position: | chr6:47625274-47624935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 177, 24 | 
| Conread position: | 146-528 | 
| Cow position: | chr6:16625632-16626001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 129, 120 | 
| Conread position: | 146-544 | 
| Cow position: | chr6:8207664-8207262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 130, 241 | 
| Conread position: | 146-621 | 
| Cow position: | chr6:16706694-16707164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 81 | 
| Conread position: | 147-331 | 
| Cow position: | chr6:30892834-30892651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 128, 71 | 
| Conread position: | 147-358 | 
| Cow position: | chr6:64815338-64815111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 147-527 | 
| Cow position: | chr6:24649539-24649917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 128, 89 | 
| Conread position: | 147-728 | 
| Cow position: | chr6:46557743-46558309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 111 | 
| Conread position: | 148-401 | 
| Cow position: | chr6:10426117-10426377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 128, 101 | 
| Conread position: | 149-354 | 
| Cow position: | chr6:42416529-42416734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 136, 97 | 
| Conread position: | 149-354 | 
| Cow position: | chr6:44016985-44016781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 124, 176 | 
| Conread position: | 149-380 | 
| Cow position: | chr6:38987986-38987754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 137, 87 | 
| Conread position: | 149-384 | 
| Cow position: | chr6:14932033-14931796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 127, 0 | 
| Conread position: | 149-385 | 
| Cow position: | chr6:32858584-32858824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 25, 49 | 
| Conread position: | 149-386 | 
| Cow position: | chr6:23888971-23888733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 78, 40 | 
| Conread position: | 149-387 | 
| Cow position: | chr6:54963683-54963449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 153, 117 | 
| Conread position: | 149-390 | 
| Cow position: | chr6:48946678-48946440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 70, 56 | 
| Conread position: | 149-409 | 
| Cow position: | chr6:48468489-48468756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 213 | 
| Conread position: | 149-477 | 
| Cow position: | chr6:66431532-66431833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 127, 161 | 
| Conread position: | 149-505 | 
| Cow position: | chr6:1104361-1104008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 127, 54 | 
| Conread position: | 149-587 | 
| Cow position: | chr6:55842473-55842046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 128, 118 | 
| Conread position: | 149-613 | 
| Cow position: | chr6:4864851-4864403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 121 | 
| Conread position: | 149-621 | 
| Cow position: | chr6:19681829-19681373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 87 | 
| Conread position: | 149-703 | 
| Cow position: | chr6:45596837-45596313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 75, 64 | 
| Conread position: | 149-709 | 
| Cow position: | chr6:44078204-44078754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 11 | 
| Conread position: | 149-715 | 
| Cow position: | chr6:17557062-17557620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 575 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 117 | 
| Conread position: | 149-728 | 
| Cow position: | chr6:10612550-10613088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 130, 56 | 
| Conread position: | 149-728 | 
| Cow position: | chr6:13688122-13687558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 18 | 
| Conread position: | 150-351 | 
| Cow position: | chr6:54447741-54447540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 135, 68 | 
| Conread position: | 150-728 | 
| Cow position: | chr6:7994793-7994204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 602 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 44, 249 | 
| Conread position: | 151-380 | 
| Cow position: | chr6:60467717-60467945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 207, 115 | 
| Conread position: | 151-696 | 
| Cow position: | chr6:21587732-21587208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 238 | 
| Conread position: | 152-261 | 
| Cow position: | chr6:1228932-1228823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 152-266 | 
| Cow position: | chr6:37468424-37468309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 152-271 | 
| Cow position: | chr6:33918448-33918328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 90, 25 | 
| Conread position: | 152-274 | 
| Cow position: | chr6:26916073-26916195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 152-274 | 
| Cow position: | chr6:28161246-28161368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 152-274 | 
| Cow position: | chr6:34608844-34608722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 152-275 | 
| Cow position: | chr6:28156427-28156305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 152-302 | 
| Cow position: | chr6:52209357-52209508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 152-318 | 
| Cow position: | chr6:37598054-37598215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 53, 80 | 
| Conread position: | 152-323 | 
| Cow position: | chr6:21732420-21732247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 18, 110 | 
| Conread position: | 152-323 | 
| Cow position: | chr6:22921077-22921249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 152-331 | 
| Cow position: | chr6:35132856-35133036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 152-339 | 
| Cow position: | chr6:50527349-50527533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 152-351 | 
| Cow position: | chr6:32854569-32854382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 126, 46 | 
| Conread position: | 152-351 | 
| Cow position: | chr6:41052557-41052757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 125, 113 | 
| Conread position: | 152-353 | 
| Cow position: | chr6:1406313-1406113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-353 | 
| Cow position: | chr6:37487613-37487412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 125, 114 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:14631279-14631484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 100, 192 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:14891142-14890939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:17352163-17351960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:17364670-17364468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:19843113-19843316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:27401392-27401191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:34111244-34111041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:38776291-38776494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:39797889-39797686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 125, 190 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:45210984-45211187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:62038235-62038434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 124, 69 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:62578623-62578826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 123, 190 | 
| Conread position: | 152-356 | 
| Cow position: | chr6:65041142-65040939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-362 | 
| Cow position: | chr6:32461876-32461665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 152-377 | 
| Cow position: | chr6:1866377-1866590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 124, 77 | 
| Conread position: | 152-377 | 
| Cow position: | chr6:41876361-41876137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 152-381 | 
| Cow position: | chr6:37331654-37331883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 20, 69 | 
| Conread position: | 152-381 | 
| Cow position: | chr6:50527772-50527542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 152-384 | 
| Cow position: | chr6:11704888-11705124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 125, 84 | 
| Conread position: | 152-387 | 
| Cow position: | chr6:14827019-14827255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 115, 21 | 
| Conread position: | 152-387 | 
| Cow position: | chr6:17865230-17865468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 133, 93 | 
| Conread position: | 152-388 | 
| Cow position: | chr6:65261015-65260777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 124, 77 | 
| Conread position: | 152-389 | 
| Cow position: | chr6:17932779-17933032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 152-390 | 
| Cow position: | chr6:52120930-52121168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 124, 78 | 
| Conread position: | 152-392 | 
| Cow position: | chr6:22804676-22804431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 124, 37 | 
| Conread position: | 152-392 | 
| Cow position: | chr6:60781769-60781512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 77, 126 | 
| Conread position: | 152-393 | 
| Cow position: | chr6:6167093-6167331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 124, 99 | 
| Conread position: | 152-396 | 
| Cow position: | chr6:20255690-20255452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 120, 65 | 
| Conread position: | 152-401 | 
| Cow position: | chr6:44906175-44906432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 47, 99 | 
| Conread position: | 152-403 | 
| Cow position: | chr6:54357685-54357430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 41, 136 | 
| Conread position: | 152-406 | 
| Cow position: | chr6:48794315-48794058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 18, 8 | 
| Conread position: | 152-410 | 
| Cow position: | chr6:14690644-14690901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 133, 31 | 
| Conread position: | 152-419 | 
| Cow position: | chr6:28180274-28180015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 125, 77 | 
| Conread position: | 152-420 | 
| Cow position: | chr6:50423710-50423445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 235, 114 | 
| Conread position: | 152-436 | 
| Cow position: | chr6:9742005-9742291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-436 | 
| Cow position: | chr6:21719090-21718804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-436 | 
| Cow position: | chr6:26925700-26925415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 226, 189 | 
| Conread position: | 152-436 | 
| Cow position: | chr6:40710215-40710501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-436 | 
| Cow position: | chr6:55608116-55607841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 206 | 
| Conread position: | 152-447 | 
| Cow position: | chr6:452321-452619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 65, 191 | 
| Conread position: | 152-447 | 
| Cow position: | chr6:10107340-10107636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 124, 12 | 
| Conread position: | 152-447 | 
| Cow position: | chr6:19737367-19737664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-447 | 
| Cow position: | chr6:46371754-46371459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 124, 17 | 
| Conread position: | 152-448 | 
| Cow position: | chr6:62331227-62330933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 185, 121 | 
| Conread position: | 152-450 | 
| Cow position: | chr6:55594082-55594378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 133, 233 | 
| Conread position: | 152-451 | 
| Cow position: | chr6:1264299-1264591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 133, 114 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:3157536-3157234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:8194980-8195284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 18, 238 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:11034417-11034115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:13494251-13493949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:14225503-14225201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:23426883-23427185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:32054844-32054546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 124, 70 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:37389149-37389451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:42481721-42482020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 124, 99 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:43014491-43014189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 124, 191 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:43389755-43390057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:43404280-43404581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:44535991-44535695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 31, 86 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:46224845-46224545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 123, 190 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:55582307-55582005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:61257699-61258002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 124, 236 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:62592870-62592567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 133, 237 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:62665616-62665918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:62851588-62851288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 188, 96 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:65920919-65920606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 133, 201 | 
| Conread position: | 152-452 | 
| Cow position: | chr6:68340109-68339808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 124, 234 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:1957081-1956777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:11721088-11720784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 114 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:14133647-14133951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 94, 190 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:15881984-15881681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:27939617-27939921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:28276350-28276654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 190 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:38053579-38053883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:40814202-40814507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 133, 186 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:43604461-43604765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:53052419-53052723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:57796207-57795903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:58761783-58762091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 116, 238 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:64337932-64337628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:65844896-65845193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 133, 114 | 
| Conread position: | 152-454 | 
| Cow position: | chr6:68871089-68870785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 129, 235 | 
| Conread position: | 152-456 | 
| Cow position: | chr6:596046-595740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-457 | 
| Cow position: | chr6:13605539-13605232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-457 | 
| Cow position: | chr6:13619781-13619474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-463 | 
| Cow position: | chr6:46161834-46161525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 120, 190 | 
| Conread position: | 152-469 | 
| Cow position: | chr6:126268-125949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-469 | 
| Cow position: | chr6:45130233-45129914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 126, 190 | 
| Conread position: | 152-473 | 
| Cow position: | chr6:60152726-60153045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 248 | 
| Conread position: | 152-474 | 
| Cow position: | chr6:875635-875308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 127, 237 | 
| Conread position: | 152-480 | 
| Cow position: | chr6:40450460-40450777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 133, 111 | 
| Conread position: | 152-482 | 
| Cow position: | chr6:15137330-15137004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 149 | 
| Conread position: | 152-482 | 
| Cow position: | chr6:24237513-24237182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-488 | 
| Cow position: | chr6:31635997-31635669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 86, 108 | 
| Conread position: | 152-499 | 
| Cow position: | chr6:16634519-16634185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 104, 54 | 
| Conread position: | 152-509 | 
| Cow position: | chr6:58075918-58076269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 77 | 
| Conread position: | 152-530 | 
| Cow position: | chr6:5445338-5445683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 189, 59 | 
| Conread position: | 152-536 | 
| Cow position: | chr6:1944420-1944781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 122 | 
| Conread position: | 152-543 | 
| Cow position: | chr6:36299488-36299099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 124, 235 | 
| Conread position: | 152-544 | 
| Cow position: | chr6:10536099-10535709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 124, 187 | 
| Conread position: | 152-544 | 
| Cow position: | chr6:33897536-33897156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 124, 95 | 
| Conread position: | 152-544 | 
| Cow position: | chr6:41033753-41034142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 124, 190 | 
| Conread position: | 152-576 | 
| Cow position: | chr6:5944611-5944192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 133, 247 | 
| Conread position: | 152-587 | 
| Cow position: | chr6:456871-457293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 19 | 
| Conread position: | 152-592 | 
| Cow position: | chr6:28811305-28810875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 90, 236 | 
| Conread position: | 152-594 | 
| Cow position: | chr6:28084323-28083897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 125, 57 | 
| Conread position: | 152-606 | 
| Cow position: | chr6:43188583-43189032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 133, 114 | 
| Conread position: | 152-606 | 
| Cow position: | chr6:47383692-47384143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 133, 25 | 
| Conread position: | 152-606 | 
| Cow position: | chr6:58605972-58606421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 128, 174 | 
| Conread position: | 152-613 | 
| Cow position: | chr6:14958652-14958196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 15 | 
| Conread position: | 152-614 | 
| Cow position: | chr6:12550958-12551415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 114 | 
| Conread position: | 152-614 | 
| Cow position: | chr6:37634480-37634940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 108 | 
| Conread position: | 152-621 | 
| Cow position: | chr6:24004237-24004688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 119 | 
| Conread position: | 152-622 | 
| Cow position: | chr6:36470875-36470409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 117 | 
| Conread position: | 152-625 | 
| Cow position: | chr6:63047267-63047748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 34 | 
| Conread position: | 152-644 | 
| Cow position: | chr6:47339666-47339181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 204 | 
| Conread position: | 152-645 | 
| Cow position: | chr6:6343118-6343607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 48 | 
| Conread position: | 152-646 | 
| Cow position: | chr6:25407716-25407215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 247 | 
| Conread position: | 152-650 | 
| Cow position: | chr6:51674600-51675089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 197 | 
| Conread position: | 152-680 | 
| Cow position: | chr6:41162011-41161487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 105, 241 | 
| Conread position: | 152-689 | 
| Cow position: | chr6:35842351-35842879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 105 | 
| Conread position: | 152-691 | 
| Cow position: | chr6:28482705-28483238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 70 | 
| Conread position: | 152-698 | 
| Cow position: | chr6:67968941-67968383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 575 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 254 | 
| Conread position: | 152-701 | 
| Cow position: | chr6:35990538-35990007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 93 | 
| Conread position: | 152-705 | 
| Cow position: | chr6:61269025-61269552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 70 | 
| Conread position: | 152-709 | 
| Cow position: | chr6:55610545-55609989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 575 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 125, 105 | 
| Conread position: | 152-719 | 
| Cow position: | chr6:24902447-24901906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 83 | 
| Conread position: | 152-725 | 
| Cow position: | chr6:26413072-26413642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 133, 114 | 
| Conread position: | 152-725 | 
| Cow position: | chr6:58073733-58074307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 177 | 
| Conread position: | 152-726 | 
| Cow position: | chr6:8804853-8804286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 49 | 
| Conread position: | 152-728 | 
| Cow position: | chr6:40912710-40912145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 124, 105 | 
| Conread position: | 152-729 | 
| Cow position: | chr6:445017-445588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 84 | 
| Conread position: | 152-731 | 
| Cow position: | chr6:60859613-60859037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 596 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 69 | 
| Conread position: | 152-732 | 
| Cow position: | chr6:52431343-52430759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 237 | 
| Conread position: | 153-275 | 
| Cow position: | chr6:21302310-21302428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 153-293 | 
| Cow position: | chr6:39286413-39286271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 109, 138 | 
| Conread position: | 153-353 | 
| Cow position: | chr6:60344050-60344250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 12, 17 | 
| Conread position: | 153-372 | 
| Cow position: | chr6:27366014-27366233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 79, 113 | 
| Conread position: | 153-386 | 
| Cow position: | chr6:31747769-31747532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 116, 36 | 
| Conread position: | 153-389 | 
| Cow position: | chr6:14706722-14706485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 119, 56 | 
| Conread position: | 153-391 | 
| Cow position: | chr6:2640430-2640182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 83, 49 | 
| Conread position: | 153-393 | 
| Cow position: | chr6:65891241-65891012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 123, 142 | 
| Conread position: | 153-401 | 
| Cow position: | chr6:13693892-13693645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 162, 53 | 
| Conread position: | 153-420 | 
| Cow position: | chr6:12845001-12845267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 120 | 
| Conread position: | 153-424 | 
| Cow position: | chr6:12934448-12934180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 113, 59 | 
| Conread position: | 153-484 | 
| Cow position: | chr6:54806914-54807246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 235 | 
| Conread position: | 153-621 | 
| Cow position: | chr6:63197476-63197011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 124, 45 | 
| Conread position: | 153-709 | 
| Cow position: | chr6:11192761-11192241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 180 | 
| Conread position: | 153-709 | 
| Cow position: | chr6:61631922-61631369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 575 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 75 | 
| Conread position: | 153-717 | 
| Cow position: | chr6:2546934-2547511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 13 | 
| Conread position: | 153-725 | 
| Cow position: | chr6:45690918-45690362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 59, 130 | 
| Conread position: | 153-727 | 
| Cow position: | chr6:47305019-47305597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 104 | 
| Conread position: | 153-728 | 
| Cow position: | chr6:10176607-10176040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 438 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 182, 76 | 
| Conread position: | 155-274 | 
| Cow position: | chr6:21608188-21608303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 156-247 | 
| Cow position: | chr6:53553187-53553278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 92 | 
| Alignm identity: | 79 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 156-271 | 
| Cow position: | chr6:7010415-7010303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 156-274 | 
| Cow position: | chr6:31739239-31739363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 156-275 | 
| Cow position: | chr6:63716099-63716217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 156-277 | 
| Cow position: | chr6:37148516-37148636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 156-278 | 
| Cow position: | chr6:62808853-62808975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 156-314 | 
| Cow position: | chr6:58370269-58370430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 156-314 | 
| Cow position: | chr6:67044665-67044824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 120, 39 | 
| Conread position: | 156-330 | 
| Cow position: | chr6:55573413-55573238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 121, 109 | 
| Conread position: | 156-331 | 
| Cow position: | chr6:1733821-1733644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 156-339 | 
| Cow position: | chr6:13345219-13345035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 156-353 | 
| Cow position: | chr6:17871092-17871290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 129, 0 | 
| Conread position: | 156-353 | 
| Cow position: | chr6:61443406-61443211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 120, 73 | 
| Conread position: | 156-356 | 
| Cow position: | chr6:68663217-68663016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 111, 188 | 
| Conread position: | 156-368 | 
| Cow position: | chr6:4164700-4164486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 179, 73 | 
| Conread position: | 156-372 | 
| Cow position: | chr6:64895781-64895991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 120, 26 | 
| Conread position: | 156-380 | 
| Cow position: | chr6:6117862-6117629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 67, 220 | 
| Conread position: | 156-380 | 
| Cow position: | chr6:59597351-59597583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 156-384 | 
| Cow position: | chr6:26837690-26837460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 179, 42 | 
| Conread position: | 156-384 | 
| Cow position: | chr6:33865396-33865167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 186, 111 | 
| Conread position: | 156-384 | 
| Cow position: | chr6:61452205-61452436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 45, 57 | 
| Conread position: | 156-386 | 
| Cow position: | chr6:37390708-37390947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 80, 104 | 
| Conread position: | 156-387 | 
| Cow position: | chr6:45666096-45665858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 143, 0 | 
| Conread position: | 156-390 | 
| Cow position: | chr6:10422859-10423103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 38, 195 | 
| Conread position: | 156-390 | 
| Cow position: | chr6:16492220-16491987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 121, 49 | 
| Conread position: | 156-392 | 
| Cow position: | chr6:51071398-51071645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 87, 116 | 
| Conread position: | 156-401 | 
| Cow position: | chr6:12116356-12116110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 179, 13 | 
| Conread position: | 156-404 | 
| Cow position: | chr6:5329849-5330090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 120, 101 | 
| Conread position: | 156-406 | 
| Cow position: | chr6:619242-619507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 156-406 | 
| Cow position: | chr6:68297886-68297639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 129, 55 | 
| Conread position: | 156-416 | 
| Cow position: | chr6:3017133-3017410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 66, 120 | 
| Conread position: | 156-424 | 
| Cow position: | chr6:48421966-48421698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 48, 231 | 
| Conread position: | 156-428 | 
| Cow position: | chr6:7216526-7216796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 129, 228 | 
| Conread position: | 156-442 | 
| Cow position: | chr6:65874261-65873975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 129, 206 | 
| Conread position: | 156-446 | 
| Cow position: | chr6:68830138-68830429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 129, 106 | 
| Conread position: | 156-447 | 
| Cow position: | chr6:46391390-46391676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 200, 73 | 
| Conread position: | 156-449 | 
| Cow position: | chr6:21312061-21311764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 73 | 
| Conread position: | 156-454 | 
| Cow position: | chr6:34842865-34842566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 129, 229 | 
| Conread position: | 156-472 | 
| Cow position: | chr6:59577043-59577360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 125, 84 | 
| Conread position: | 156-473 | 
| Cow position: | chr6:57685853-57686161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 195 | 
| Conread position: | 156-476 | 
| Cow position: | chr6:65910169-65910483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 121, 165 | 
| Conread position: | 156-480 | 
| Cow position: | chr6:12500551-12500873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 211 | 
| Conread position: | 156-482 | 
| Cow position: | chr6:1538498-1538815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 129, 80 | 
| Conread position: | 156-488 | 
| Cow position: | chr6:6569815-6570145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 120, 229 | 
| Conread position: | 156-491 | 
| Cow position: | chr6:66199484-66199813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 14, 38 | 
| Conread position: | 156-509 | 
| Cow position: | chr6:3936241-3936591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 165, 66 | 
| Conread position: | 156-523 | 
| Cow position: | chr6:8318471-8318107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 64 | 
| Conread position: | 156-523 | 
| Cow position: | chr6:42518664-42519036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 54, 234 | 
| Conread position: | 156-528 | 
| Cow position: | chr6:24652486-24652136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 85 | 
| Conread position: | 156-531 | 
| Cow position: | chr6:9322834-9323210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 56, 185 | 
| Conread position: | 156-576 | 
| Cow position: | chr6:3444973-3444563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 222, 11 | 
| Conread position: | 156-576 | 
| Cow position: | chr6:6642894-6642501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 366, 110 | 
| Conread position: | 156-582 | 
| Cow position: | chr6:54140512-54140910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 72 | 
| Conread position: | 156-594 | 
| Cow position: | chr6:19427144-19427575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 74 | 
| Conread position: | 156-621 | 
| Cow position: | chr6:55474944-55475407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 201, 106 | 
| Conread position: | 156-625 | 
| Cow position: | chr6:42565380-42565843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 136 | 
| Conread position: | 156-696 | 
| Cow position: | chr6:6060863-6060348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 186 | 
| Conread position: | 156-697 | 
| Cow position: | chr6:15305283-15305798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 201, 73 | 
| Conread position: | 156-704 | 
| Cow position: | chr6:49398923-49398395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 232 | 
| Conread position: | 156-705 | 
| Cow position: | chr6:36195908-36196437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 229 | 
| Conread position: | 156-709 | 
| Cow position: | chr6:23117705-23117158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 120, 208 | 
| Conread position: | 156-719 | 
| Cow position: | chr6:18447815-18447265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 575 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 112 | 
| Conread position: | 156-723 | 
| Cow position: | chr6:611262-611796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 7 | 
| Conread position: | 156-725 | 
| Cow position: | chr6:4468454-4469021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 74 | 
| Conread position: | 156-725 | 
| Cow position: | chr6:12927817-12928394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 56 | 
| Conread position: | 156-725 | 
| Cow position: | chr6:21004350-21004932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 100 | 
| Conread position: | 156-726 | 
| Cow position: | chr6:48567648-48567104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 577 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 196 | 
| Conread position: | 156-726 | 
| Cow position: | chr6:67430195-67429611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 116, 233 | 
| Conread position: | 156-728 | 
| Cow position: | chr6:9751351-9750782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 595 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 106, 207 | 
| Conread position: | 156-728 | 
| Cow position: | chr6:35725786-35726350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 105 | 
| Conread position: | 156-730 | 
| Cow position: | chr6:33302105-33302657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 52 | 
| Conread position: | 156-732 | 
| Cow position: | chr6:32121605-32122156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 585 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 229 | 
| Conread position: | 157-372 | 
| Cow position: | chr6:41357494-41357707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 172, 0 | 
| Conread position: | 157-482 | 
| Cow position: | chr6:28111993-28111672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 181, 108 | 
| Conread position: | 157-533 | 
| Cow position: | chr6:62925296-62924935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 13 | 
| Conread position: | 157-534 | 
| Cow position: | chr6:58315742-58316113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 75, 132 | 
| Conread position: | 157-544 | 
| Cow position: | chr6:48290637-48291022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 119, 230 | 
| Conread position: | 157-595 | 
| Cow position: | chr6:10459433-10459868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 118, 29 | 
| Conread position: | 157-710 | 
| Cow position: | chr6:29210197-29210717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 98 | 
| Conread position: | 157-732 | 
| Cow position: | chr6:24781869-24781289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 595 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 111 | 
| Conread position: | 158-273 | 
| Cow position: | chr6:18904875-18904761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 158-353 | 
| Cow position: | chr6:47848004-47847809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 118, 76 | 
| Conread position: | 158-364 | 
| Cow position: | chr6:53448744-53448947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 127, 184 | 
| Conread position: | 158-387 | 
| Cow position: | chr6:60890950-60890711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 64, 21 | 
| Conread position: | 158-402 | 
| Cow position: | chr6:30285385-30285636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 89, 104 | 
| Conread position: | 158-422 | 
| Cow position: | chr6:42267563-42267818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 127, 71 | 
| Conread position: | 158-452 | 
| Cow position: | chr6:3719680-3719977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 127, 184 | 
| Conread position: | 158-523 | 
| Cow position: | chr6:17090289-17090653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 61, 114 | 
| Conread position: | 158-535 | 
| Cow position: | chr6:58589732-58590089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 118, 64 | 
| Conread position: | 158-589 | 
| Cow position: | chr6:34549105-34549521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 84, 115 | 
| Conread position: | 158-627 | 
| Cow position: | chr6:11169404-11169861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 163, 127 | 
| Conread position: | 158-703 | 
| Cow position: | chr6:39358642-39358110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 37 | 
| Conread position: | 158-708 | 
| Cow position: | chr6:10106304-10105745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 252 | 
| Conread position: | 158-709 | 
| Cow position: | chr6:323614-323063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 234 | 
| Conread position: | 158-729 | 
| Cow position: | chr6:11442126-11441543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 120, 175 | 
| Conread position: | 158-730 | 
| Cow position: | chr6:26728830-26728287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 109 | 
| Conread position: | 159-354 | 
| Cow position: | chr6:4948639-4948833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 126, 183 | 
| Conread position: | 159-392 | 
| Cow position: | chr6:23003704-23003479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 117, 38 | 
| Conread position: | 159-396 | 
| Cow position: | chr6:180666-180425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 182, 107 | 
| Conread position: | 159-613 | 
| Cow position: | chr6:31525749-31526190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 70 | 
| Conread position: | 160-391 | 
| Cow position: | chr6:29077427-29077661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 76, 38 | 
| Conread position: | 160-469 | 
| Cow position: | chr6:50446061-50445756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 197, 106 | 
| Conread position: | 160-523 | 
| Cow position: | chr6:57504462-57504817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 65, 102 | 
| Conread position: | 160-577 | 
| Cow position: | chr6:561318-561735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 117, 69 | 
| Conread position: | 160-726 | 
| Cow position: | chr6:8562414-8562971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 228 | 
| Conread position: | 161-274 | 
| Cow position: | chr6:41214386-41214499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 161-466 | 
| Cow position: | chr6:61575303-61575610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 228 | 
| Conread position: | 162-387 | 
| Cow position: | chr6:33147762-33147987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 114, 67 | 
| Conread position: | 162-426 | 
| Cow position: | chr6:10649318-10649063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 173, 104 | 
| Conread position: | 162-595 | 
| Cow position: | chr6:53401071-53401482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 74 | 
| Conread position: | 162-717 | 
| Cow position: | chr6:47519751-47520303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 171, 104 | 
| Conread position: | 163-385 | 
| Cow position: | chr6:17248434-17248661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 66, 11 | 
| Conread position: | 163-530 | 
| Cow position: | chr6:28148547-28148895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 43, 91 | 
| Conread position: | 163-586 | 
| Cow position: | chr6:44510936-44511353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 84, 243 | 
| Conread position: | 167-422 | 
| Cow position: | chr6:46627016-46627277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 109, 68 | 
| Conread position: | 169-434 | 
| Cow position: | chr6:34235728-34235467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 14, 170 | 
| Conread position: | 169-475 | 
| Cow position: | chr6:40264486-40264190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 24 | 
| Conread position: | 169-476 | 
| Cow position: | chr6:28476885-28477189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 53, 72 | 
| Conread position: | 169-482 | 
| Cow position: | chr6:12389806-12390114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 116, 88 | 
| Conread position: | 169-608 | 
| Cow position: | chr6:63272910-63272473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 102 | 
| Conread position: | 169-709 | 
| Cow position: | chr6:60057958-60057399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 88 | 
| Conread position: | 170-331 | 
| Cow position: | chr6:6136597-6136760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 170-351 | 
| Cow position: | chr6:23545758-23545578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 106, 172 | 
| Conread position: | 170-356 | 
| Cow position: | chr6:6239875-6240064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 68, 176 | 
| Conread position: | 170-356 | 
| Cow position: | chr6:12913778-12913593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 108, 172 | 
| Conread position: | 170-444 | 
| Cow position: | chr6:19508723-19508461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 64, 98 | 
| Conread position: | 170-452 | 
| Cow position: | chr6:47387204-47387490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 86, 174 | 
| Conread position: | 170-499 | 
| Cow position: | chr6:54369188-54368867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 59 | 
| Conread position: | 170-704 | 
| Cow position: | chr6:34196440-34195928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 173 | 
| Conread position: | 172-454 | 
| Cow position: | chr6:20951669-20951957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 113, 215 | 
| Conread position: | 172-463 | 
| Cow position: | chr6:26696897-26696605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 104, 94 | 
| Conread position: | 173-394 | 
| Cow position: | chr6:41961254-41961029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 143, 92 | 
| Conread position: | 173-524 | 
| Cow position: | chr6:62479454-62479106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 94 | 
| Conread position: | 173-587 | 
| Cow position: | chr6:19330043-19329649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 103, 56 | 
| Conread position: | 175-465 | 
| Cow position: | chr6:642864-642565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 287 | 
| Conread position: | 176-392 | 
| Cow position: | chr6:28563894-28564108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 149, 91 | 
| Conread position: | 176-482 | 
| Cow position: | chr6:69500044-69500341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 100, 131 | 
| Conread position: | 176-617 | 
| Cow position: | chr6:57164141-57164573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 111 | 
| Conread position: | 176-624 | 
| Cow position: | chr6:38218378-38218821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 210 | 
| Conread position: | 176-643 | 
| Cow position: | chr6:54867226-54867691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 51 | 
| Conread position: | 177-386 | 
| Cow position: | chr6:51387481-51387693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 164, 54 | 
| Conread position: | 177-454 | 
| Cow position: | chr6:41798590-41798311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 99, 210 | 
| Conread position: | 179-380 | 
| Cow position: | chr6:33921533-33921332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 107, 53 | 
| Conread position: | 179-452 | 
| Cow position: | chr6:61629987-61629711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 97, 209 | 
| Conread position: | 179-492 | 
| Cow position: | chr6:32778812-32778498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 97, 163 | 
| Conread position: | 179-593 | 
| Cow position: | chr6:55577883-55578288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 106, 152 | 
| Conread position: | 179-717 | 
| Cow position: | chr6:6264363-6264897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 50 | 
| Conread position: | 180-459 | 
| Cow position: | chr6:57411361-57411627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 18, 89 | 
| Conread position: | 180-720 | 
| Cow position: | chr6:61515481-61514948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 89 | 
| Conread position: | 181-376 | 
| Cow position: | chr6:32024618-32024420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 94, 19 | 
| Conread position: | 181-436 | 
| Cow position: | chr6:21534778-21535027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 167 | 
| Conread position: | 182-451 | 
| Cow position: | chr6:59363214-59362939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 50, 159 | 
| Conread position: | 182-452 | 
| Cow position: | chr6:64131508-64131782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 10, 207 | 
| Conread position: | 182-485 | 
| Cow position: | chr6:57119207-57118918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 87, 45 | 
| Conread position: | 182-709 | 
| Cow position: | chr6:22332678-22332156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 207 | 
| Conread position: | 183-356 | 
| Cow position: | chr6:13597171-13596999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 93, 159 | 
| Conread position: | 183-469 | 
| Cow position: | chr6:56808368-56808080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 93, 204 | 
| Conread position: | 185-349 | 
| Cow position: | chr6:3591849-3592011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 92, 44 | 
| Conread position: | 185-373 | 
| Cow position: | chr6:60274500-60274306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 102, 82 | 
| Conread position: | 185-451 | 
| Cow position: | chr6:55173049-55173325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 107, 165 | 
| Conread position: | 185-452 | 
| Cow position: | chr6:1273634-1273371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 88, 158 | 
| Conread position: | 185-452 | 
| Cow position: | chr6:32298745-32298477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 91, 201 | 
| Conread position: | 185-452 | 
| Cow position: | chr6:44705618-44705349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 91, 157 | 
| Conread position: | 185-476 | 
| Cow position: | chr6:40713775-40713489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 26 | 
| Conread position: | 186-386 | 
| Cow position: | chr6:32337134-32337323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 122, 67 | 
| Conread position: | 186-452 | 
| Cow position: | chr6:2833151-2832887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 90, 199 | 
| Conread position: | 186-454 | 
| Cow position: | chr6:54899827-54900097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 90, 201 | 
| Conread position: | 186-544 | 
| Cow position: | chr6:25348046-25347690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 90, 156 | 
| Conread position: | 187-356 | 
| Cow position: | chr6:51471191-51471359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 43, 35 | 
| Conread position: | 187-454 | 
| Cow position: | chr6:62418805-62418536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 89, 200 | 
| Conread position: | 187-627 | 
| Cow position: | chr6:42961642-42961205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 202 | 
| Conread position: | 187-724 | 
| Cow position: | chr6:60473859-60474389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 548 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 199 | 
| Conread position: | 187-728 | 
| Cow position: | chr6:50746702-50747263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 121 | 
| Conread position: | 188-415 | 
| Cow position: | chr6:57149229-57149001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 147, 200 | 
| Conread position: | 189-356 | 
| Cow position: | chr6:1331699-1331533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 87, 153 | 
| Conread position: | 189-489 | 
| Cow position: | chr6:13603194-13603487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 96, 142 | 
| Conread position: | 189-530 | 
| Cow position: | chr6:47150506-47150852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 281 | 
| Conread position: | 189-607 | 
| Cow position: | chr6:52562441-52562042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 89, 47 | 
| Conread position: | 189-727 | 
| Cow position: | chr6:54365596-54365075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 96 | 
| Conread position: | 190-452 | 
| Cow position: | chr6:53960283-53960019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 91, 197 | 
| Conread position: | 190-726 | 
| Cow position: | chr6:48281723-48282251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 195 | 
| Conread position: | 193-353 | 
| Cow position: | chr6:54735471-54735630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 194-380 | 
| Cow position: | chr6:53799148-53798959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 79, 96 | 
| Conread position: | 194-392 | 
| Cow position: | chr6:16352587-16352389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 61, 77 | 
| Conread position: | 194-447 | 
| Cow position: | chr6:43896940-43896685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 91, 193 | 
| Conread position: | 194-492 | 
| Cow position: | chr6:59688570-59688272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 160, 122 | 
| Conread position: | 194-637 | 
| Cow position: | chr6:35471794-35471342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 198 | 
| Conread position: | 195-430 | 
| Cow position: | chr6:59277207-59276968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 83, 99 | 
| Conread position: | 195-452 | 
| Cow position: | chr6:5280226-5279971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 146, 6 | 
| Conread position: | 197-386 | 
| Cow position: | chr6:42731937-42732132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 79, 190 | 
| Conread position: | 197-391 | 
| Cow position: | chr6:35769747-35769550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 197-454 | 
| Cow position: | chr6:43430128-43429869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 79, 190 | 
| Conread position: | 198-356 | 
| Cow position: | chr6:33579686-33579529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 78, 144 | 
| Conread position: | 198-606 | 
| Cow position: | chr6:52408926-52408520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 61, 49 | 
| Conread position: | 200-544 | 
| Cow position: | chr6:2453847-2454190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 76, 139 | 
| Conread position: | 201-321 | 
| Cow position: | chr6:67573864-67573982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 201-356 | 
| Cow position: | chr6:55289632-55289786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 75, 141 | 
| Conread position: | 201-480 | 
| Cow position: | chr6:11529246-11529525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 75, 10 | 
| Conread position: | 203-454 | 
| Cow position: | chr6:508389-508642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 73, 184 | 
| Conread position: | 203-460 | 
| Cow position: | chr6:64449133-64449387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 96 | 
| Conread position: | 204-452 | 
| Cow position: | chr6:65839132-65838882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 72, 183 | 
| Conread position: | 205-356 | 
| Cow position: | chr6:11097699-11097849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 71, 137 | 
| Conread position: | 205-520 | 
| Cow position: | chr6:32335563-32335851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 207-436 | 
| Cow position: | chr6:57857625-57857854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 66, 180 | 
| Conread position: | 207-729 | 
| Cow position: | chr6:3952270-3952780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 528 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 322, 77 | 
| Conread position: | 208-420 | 
| Cow position: | chr6:17068074-17067863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 20, 60 | 
| Conread position: | 208-452 | 
| Cow position: | chr6:21254788-21255034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 68, 134 | 
| Conread position: | 208-452 | 
| Cow position: | chr6:22788201-22788447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 77, 134 | 
| Conread position: | 208-469 | 
| Cow position: | chr6:46628232-46627966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 77, 156 | 
| Conread position: | 208-544 | 
| Cow position: | chr6:52462772-52463106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 68, 179 | 
| Conread position: | 210-436 | 
| Cow position: | chr6:25217591-25217367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 71, 146 | 
| Conread position: | 210-454 | 
| Cow position: | chr6:46637930-46638176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 68, 177 | 
| Conread position: | 210-629 | 
| Cow position: | chr6:11829914-11830347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 270 | 
| Conread position: | 213-469 | 
| Cow position: | chr6:3719257-3718973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 213-504 | 
| Cow position: | chr6:53710867-53711149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 22, 56 | 
| Conread position: | 213-705 | 
| Cow position: | chr6:31535821-31535338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 177 | 
| Conread position: | 213-709 | 
| Cow position: | chr6:65676008-65676483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 148 | 
| Conread position: | 214-430 | 
| Cow position: | chr6:20329773-20329991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 71, 170 | 
| Conread position: | 214-697 | 
| Cow position: | chr6:54132571-54133038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 13 | 
| Conread position: | 215-709 | 
| Cow position: | chr6:56849771-56850256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 125 | 
| Conread position: | 217-384 | 
| Cow position: | chr6:1002479-1002308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 52, 39 | 
| Conread position: | 217-723 | 
| Cow position: | chr6:38853903-38853406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 520 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 172 | 
| Conread position: | 219-627 | 
| Cow position: | chr6:54991235-54990843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 122, 47 | 
| Conread position: | 221-480 | 
| Cow position: | chr6:3621872-3622135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 58, 46 | 
| Conread position: | 221-697 | 
| Cow position: | chr6:41733386-41733862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 121 | 
| Conread position: | 222-458 | 
| Cow position: | chr6:40138945-40138723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 55, 103 | 
| Conread position: | 222-683 | 
| Cow position: | chr6:26915090-26915541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 163 | 
| Conread position: | 222-698 | 
| Cow position: | chr6:41375513-41375998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 37 | 
| Conread position: | 222-706 | 
| Cow position: | chr6:61113510-61114001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 167 | 
| Conread position: | 222-717 | 
| Cow position: | chr6:9736879-9736396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 520 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 47, 59 | 
| Conread position: | 223-612 | 
| Cow position: | chr6:20098203-20097816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 162 | 
| Conread position: | 227-424 | 
| Cow position: | chr6:62967122-62966922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 50, 105 | 
| Conread position: | 227-712 | 
| Cow position: | chr6:34251510-34251056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 421, 56 | 
| Conread position: | 227-726 | 
| Cow position: | chr6:13040217-13040707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 523 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 50, 163 | 
| Conread position: | 228-463 | 
| Cow position: | chr6:39994695-39994463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 49, 161 | 
| Conread position: | 228-469 | 
| Cow position: | chr6:1891079-1890840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 126, 157 | 
| Conread position: | 228-585 | 
| Cow position: | chr6:130398-130047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 39 | 
| Conread position: | 229-357 | 
| Cow position: | chr6:44622891-44622763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 47, 97 | 
| Conread position: | 229-436 | 
| Cow position: | chr6:61978414-61978203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 47, 153 | 
| Conread position: | 229-454 | 
| Cow position: | chr6:41622944-41622717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 47, 158 | 
| Conread position: | 229-526 | 
| Cow position: | chr6:54885146-54884849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 156 | 
| Conread position: | 232-456 | 
| Cow position: | chr6:52022082-52021856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 46, 155 | 
| Conread position: | 232-711 | 
| Cow position: | chr6:50983978-50984460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 145 | 
| Conread position: | 232-727 | 
| Cow position: | chr6:34475773-34475299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 41 | 
| Conread position: | 234-464 | 
| Cow position: | chr6:66453574-66453798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 43, 13 | 
| Conread position: | 234-593 | 
| Cow position: | chr6:899513-899169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 10, 47 | 
| Conread position: | 234-594 | 
| Cow position: | chr6:56376573-56376224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 122, 13 | 
| Conread position: | 236-352 | 
| Cow position: | chr6:64314191-64314074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 236-380 | 
| Cow position: | chr6:16288644-16288502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 41, 31 | 
| Conread position: | 236-380 | 
| Cow position: | chr6:31048732-31048589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 41, 107 | 
| Conread position: | 236-391 | 
| Cow position: | chr6:14289560-14289406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 41, 29 | 
| Conread position: | 236-466 | 
| Cow position: | chr6:10635951-10636175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 40, 29 | 
| Conread position: | 236-472 | 
| Cow position: | chr6:56041848-56041618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 41, 145 | 
| Conread position: | 236-476 | 
| Cow position: | chr6:30826260-30826020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 106, 37 | 
| Conread position: | 236-481 | 
| Cow position: | chr6:6995170-6994938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 41, 25 | 
| Conread position: | 236-499 | 
| Cow position: | chr6:56902638-56902900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 40, 153 | 
| Conread position: | 236-500 | 
| Cow position: | chr6:3374795-3374531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 99, 56 | 
| Conread position: | 236-506 | 
| Cow position: | chr6:20379691-20379431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 41, 121 | 
| Conread position: | 236-519 | 
| Cow position: | chr6:49685359-49685634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 41, 138 | 
| Conread position: | 236-522 | 
| Cow position: | chr6:52025881-52025598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 11, 25 | 
| Conread position: | 236-524 | 
| Cow position: | chr6:67304576-67304859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 40, 30 | 
| Conread position: | 236-546 | 
| Cow position: | chr6:14850937-14850636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 292, 27 | 
| Conread position: | 236-590 | 
| Cow position: | chr6:48573108-48572759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 100, 28 | 
| Conread position: | 236-621 | 
| Cow position: | chr6:28977257-28976888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 39, 100 | 
| Conread position: | 236-621 | 
| Cow position: | chr6:45065232-45064865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 50, 96 | 
| Conread position: | 236-621 | 
| Cow position: | chr6:64436556-64436180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 41, 89 | 
| Conread position: | 236-622 | 
| Cow position: | chr6:66874136-66874502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 89 | 
| Conread position: | 236-626 | 
| Cow position: | chr6:9452995-9452613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 102, 49 | 
| Conread position: | 236-626 | 
| Cow position: | chr6:21869871-21869492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 41, 106 | 
| Conread position: | 236-626 | 
| Cow position: | chr6:68049210-68049574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 30 | 
| Conread position: | 236-698 | 
| Cow position: | chr6:63286736-63286271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 42, 31 | 
| Conread position: | 236-705 | 
| Cow position: | chr6:31564559-31564117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 50, 24 | 
| Conread position: | 236-705 | 
| Cow position: | chr6:36202602-36203056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 149 | 
| Conread position: | 236-705 | 
| Cow position: | chr6:37148971-37149417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 48 | 
| Conread position: | 236-708 | 
| Cow position: | chr6:54490966-54490508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 119 | 
| Conread position: | 236-709 | 
| Cow position: | chr6:66433722-66434193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 117 | 
| Conread position: | 236-710 | 
| Cow position: | chr6:24468618-24468159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 67 | 
| Conread position: | 236-710 | 
| Cow position: | chr6:44194771-44194316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 152 | 
| Conread position: | 236-715 | 
| Cow position: | chr6:38440956-38441425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 122 | 
| Conread position: | 236-716 | 
| Cow position: | chr6:15301043-15300594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 102 | 
| Conread position: | 236-716 | 
| Cow position: | chr6:51581485-51581008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 162 | 
| Conread position: | 236-722 | 
| Cow position: | chr6:53460797-53460319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 148 | 
| Conread position: | 236-728 | 
| Cow position: | chr6:7103461-7102979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 507 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 18 | 
| Conread position: | 237-381 | 
| Cow position: | chr6:6671412-6671555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 40, 119 | 
| Conread position: | 237-387 | 
| Cow position: | chr6:20406654-20406814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 237-392 | 
| Cow position: | chr6:40137290-40137129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 66, 150 | 
| Conread position: | 237-449 | 
| Cow position: | chr6:20605709-20605920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 38, 29 | 
| Conread position: | 237-451 | 
| Cow position: | chr6:2582650-2582857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 39, 26 | 
| Conread position: | 237-473 | 
| Cow position: | chr6:28080127-28079890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 23, 109 | 
| Conread position: | 237-530 | 
| Cow position: | chr6:21542095-21542383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 40, 148 | 
| Conread position: | 237-530 | 
| Cow position: | chr6:60239613-60239335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 106, 27 | 
| Conread position: | 237-614 | 
| Cow position: | chr6:60350524-60350147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 152 | 
| Conread position: | 237-705 | 
| Cow position: | chr6:16103427-16102956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 99 | 
| Conread position: | 237-705 | 
| Cow position: | chr6:56349946-56350409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 48, 152 | 
| Conread position: | 237-707 | 
| Cow position: | chr6:67950734-67951194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 114 | 
| Conread position: | 237-709 | 
| Cow position: | chr6:14201473-14201931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 40, 152 | 
| Conread position: | 237-713 | 
| Cow position: | chr6:29239718-29240175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 93 | 
| Conread position: | 237-713 | 
| Cow position: | chr6:46865824-46865342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 154 | 
| Conread position: | 237-718 | 
| Cow position: | chr6:19401637-19402094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 40, 99 | 
| Conread position: | 237-724 | 
| Cow position: | chr6:66087730-66088197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 40, 94 | 
| Conread position: | 238-390 | 
| Cow position: | chr6:34204036-34204193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 52, 28 | 
| Conread position: | 238-428 | 
| Cow position: | chr6:51398577-51398764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 39, 148 | 
| Conread position: | 238-428 | 
| Cow position: | chr6:59302048-59301857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 48, 12 | 
| Conread position: | 238-475 | 
| Cow position: | chr6:388947-389184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 39, 65 | 
| Conread position: | 238-476 | 
| Cow position: | chr6:45160515-45160283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 119 | 
| Conread position: | 238-530 | 
| Cow position: | chr6:7824539-7824826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 39, 28 | 
| Conread position: | 238-728 | 
| Cow position: | chr6:6063503-6063032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 497 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 110 | 
| Conread position: | 239-387 | 
| Cow position: | chr6:55344705-55344552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 239-527 | 
| Cow position: | chr6:25773604-25773328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 38, 103 | 
| Conread position: | 239-573 | 
| Cow position: | chr6:7173987-7173645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 38, 157 | 
| Conread position: | 239-591 | 
| Cow position: | chr6:49002947-49002618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 38, 28 | 
| Conread position: | 239-709 | 
| Cow position: | chr6:3929098-3929562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 120, 52 | 
| Conread position: | 239-709 | 
| Cow position: | chr6:46860390-46859932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 28 | 
| Conread position: | 239-717 | 
| Cow position: | chr6:55282513-55282045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 135 | 
| Conread position: | 240-594 | 
| Cow position: | chr6:38614602-38614937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 100 | 
| Conread position: | 240-698 | 
| Cow position: | chr6:4383271-4383702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 292, 99 | 
| Conread position: | 240-725 | 
| Cow position: | chr6:38207717-38207232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 503 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 27 | 
| Conread position: | 241-392 | 
| Cow position: | chr6:9453889-9454035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 241-460 | 
| Cow position: | chr6:38895296-38895085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 31, 63 | 
| Conread position: | 241-626 | 
| Cow position: | chr6:40774569-40774175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 35, 104 | 
| Conread position: | 241-627 | 
| Cow position: | chr6:53651818-53652198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 6, 147 | 
| Conread position: | 241-657 | 
| Cow position: | chr6:9026296-9026709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 45, 143 | 
| Conread position: | 241-712 | 
| Cow position: | chr6:14949702-14949249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 121 | 
| Conread position: | 241-732 | 
| Cow position: | chr6:16746119-16746610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 91 | 
| Conread position: | 241-732 | 
| Cow position: | chr6:24110083-24110546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 101 | 
| Conread position: | 242-380 | 
| Cow position: | chr6:10225896-10225762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 242-409 | 
| Cow position: | chr6:21184736-21184902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 34, 145 | 
| Conread position: | 242-474 | 
| Cow position: | chr6:5462268-5462051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 113, 88 | 
| Conread position: | 242-487 | 
| Cow position: | chr6:1907319-1907562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 28, 159 | 
| Conread position: | 242-528 | 
| Cow position: | chr6:10254022-10254299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 96, 15 | 
| Conread position: | 242-532 | 
| Cow position: | chr6:34031448-34031723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 35, 89 | 
| Conread position: | 242-637 | 
| Cow position: | chr6:37199769-37199370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 157 | 
| Conread position: | 242-729 | 
| Cow position: | chr6:35435783-35436245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 116 | 
| Conread position: | 243-380 | 
| Cow position: | chr6:15266488-15266345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 243-437 | 
| Cow position: | chr6:11383183-11383007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 243-448 | 
| Cow position: | chr6:7694572-7694365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 92, 66 | 
| Conread position: | 243-481 | 
| Cow position: | chr6:22968855-22969097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 18, 148 | 
| Conread position: | 243-585 | 
| Cow position: | chr6:55936195-55935862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 34, 140 | 
| Conread position: | 243-594 | 
| Cow position: | chr6:23248182-23247841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 42, 146 | 
| Conread position: | 243-614 | 
| Cow position: | chr6:7190338-7189974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 131 | 
| Conread position: | 243-615 | 
| Cow position: | chr6:51893732-51893354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 29, 152 | 
| Conread position: | 243-709 | 
| Cow position: | chr6:35415740-35415278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 33, 24 | 
| Conread position: | 243-718 | 
| Cow position: | chr6:54430600-54431084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 146 | 
| Conread position: | 244-469 | 
| Cow position: | chr6:242596-242814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 33, 87 | 
| Conread position: | 244-481 | 
| Cow position: | chr6:15923215-15922983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 114, 23 | 
| Conread position: | 244-617 | 
| Cow position: | chr6:21737102-21736745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 12, 84 | 
| Conread position: | 245-468 | 
| Cow position: | chr6:21110752-21110967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 28, 110 | 
| Conread position: | 245-482 | 
| Cow position: | chr6:48344111-48344349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 32, 155 | 
| Conread position: | 245-530 | 
| Cow position: | chr6:6460325-6460602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 90, 39 | 
| Conread position: | 245-633 | 
| Cow position: | chr6:60442202-60442570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 121 | 
| Conread position: | 245-709 | 
| Cow position: | chr6:8965873-8966327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 143 | 
| Conread position: | 245-723 | 
| Cow position: | chr6:50090423-50090900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 32, 153 | 
| Conread position: | 246-393 | 
| Cow position: | chr6:49821308-49821453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 136, 27 | 
| Conread position: | 246-522 | 
| Cow position: | chr6:24223377-24223102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 12, 7 | 
| Conread position: | 247-390 | 
| Cow position: | chr6:1467976-1467826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 247-446 | 
| Cow position: | chr6:55366538-55366335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 28, 143 | 
| Conread position: | 247-480 | 
| Cow position: | chr6:30786363-30786141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 30, 104 | 
| Conread position: | 247-492 | 
| Cow position: | chr6:49647296-49647051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 57, 73 | 
| Conread position: | 247-503 | 
| Cow position: | chr6:61130697-61130444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 30, 142 | 
| Conread position: | 247-729 | 
| Cow position: | chr6:7539358-7539833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 148 | 
| Conread position: | 247-729 | 
| Cow position: | chr6:17997530-17997062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 138 | 
| Conread position: | 248-430 | 
| Cow position: | chr6:68112700-68112513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 92, 137 | 
| Conread position: | 248-436 | 
| Cow position: | chr6:59015776-59015587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 25, 117 | 
| Conread position: | 248-724 | 
| Cow position: | chr6:59620455-59620910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 137 | 
| Conread position: | 248-728 | 
| Cow position: | chr6:65702615-65702150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 37, 84 | 
| Conread position: | 249-541 | 
| Cow position: | chr6:24961932-24962214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 36, 140 | 
| Conread position: | 249-705 | 
| Cow position: | chr6:65903829-65903391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 108, 135 | 
| Conread position: | 249-709 | 
| Cow position: | chr6:62324777-62325232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 24, 137 | 
| Conread position: | 250-466 | 
| Cow position: | chr6:24515405-24515196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 28, 135 | 
| Conread position: | 250-626 | 
| Cow position: | chr6:59069840-59069463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 28, 138 | 
| Conread position: | 250-705 | 
| Cow position: | chr6:57405336-57404901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 275, 102 | 
| Conread position: | 250-709 | 
| Cow position: | chr6:2896539-2896980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 27, 69 | 
| Conread position: | 250-709 | 
| Cow position: | chr6:53025010-53024572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 27, 138 | 
| Conread position: | 251-467 | 
| Cow position: | chr6:53139140-53138919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 25, 138 | 
| Conread position: | 251-471 | 
| Cow position: | chr6:46400616-46400406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 25, 91 | 
| Conread position: | 251-710 | 
| Cow position: | chr6:23532452-23532886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 26, 134 | 
| Conread position: | 251-732 | 
| Cow position: | chr6:240149-239663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 22, 108 | 
| Conread position: | 252-488 | 
| Cow position: | chr6:44377056-44377292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 24, 14 | 
| Conread position: | 252-700 | 
| Cow position: | chr6:58732524-58732070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 25, 113 | 
| Conread position: | 252-728 | 
| Cow position: | chr6:67456493-67456997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 239 | 
| Conread position: | 253-469 | 
| Cow position: | chr6:57680644-57680426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 24, 152 | 
| Conread position: | 254-612 | 
| Cow position: | chr6:7989621-7989274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 81, 36 | 
| Conread position: | 254-646 | 
| Cow position: | chr6:54864874-54864483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 13 | 
| Conread position: | 254-730 | 
| Cow position: | chr6:21231329-21231775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 5 | 
| Conread position: | 255-529 | 
| Cow position: | chr6:61137158-61137434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 17, 140 | 
| Conread position: | 255-693 | 
| Cow position: | chr6:19695600-19696032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 12 | 
| Conread position: | 255-728 | 
| Cow position: | chr6:31260780-31261260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 22, 188 | 
| Conread position: | 256-686 | 
| Cow position: | chr6:38641292-38641710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 96 | 
| Conread position: | 256-709 | 
| Cow position: | chr6:6098488-6098010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 127 | 
| Conread position: | 257-711 | 
| Cow position: | chr6:20157120-20157577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 115 | 
| Conread position: | 258-424 | 
| Cow position: | chr6:89113-88945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 15, 131 | 
| Conread position: | 259-488 | 
| Cow position: | chr6:48425524-48425299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 18, 94 | 
| Conread position: | 259-705 | 
| Cow position: | chr6:66131105-66131554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 72 | 
| Conread position: | 260-389 | 
| Cow position: | chr6:22986192-22986059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 78, 112 | 
| Conread position: | 260-602 | 
| Cow position: | chr6:28318207-28318529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 25, 80 | 
| Conread position: | 260-621 | 
| Cow position: | chr6:528478-528132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 81, 128 | 
| Conread position: | 260-709 | 
| Cow position: | chr6:10400097-10399669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 17, 82 | 
| Conread position: | 261-439 | 
| Cow position: | chr6:46245524-46245343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 16, 137 | 
| Conread position: | 261-582 | 
| Cow position: | chr6:22503124-22502798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 15, 212 | 
| Conread position: | 263-480 | 
| Cow position: | chr6:33276840-33277057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 14, 53 | 
| Conread position: | 263-621 | 
| Cow position: | chr6:63299222-63298879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 107, 19 | 
| Conread position: | 263-717 | 
| Cow position: | chr6:55546359-55545925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 14, 28 | 
| Conread position: | 264-521 | 
| Cow position: | chr6:415897-416157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 73, 124 | 
| Conread position: | 264-695 | 
| Cow position: | chr6:12092182-12091761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 71 | 
| Conread position: | 264-703 | 
| Cow position: | chr6:21062081-21061658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 67 | 
| Conread position: | 264-724 | 
| Cow position: | chr6:48187779-48187320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 13, 85 | 
| Conread position: | 265-694 | 
| Cow position: | chr6:63720002-63720416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 86 | 
| Conread position: | 267-413 | 
| Cow position: | chr6:21812535-21812679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 10, 118 | 
| Conread position: | 267-430 | 
| Cow position: | chr6:36011500-36011655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 90, 60 | 
| Conread position: | 267-528 | 
| Cow position: | chr6:53731326-53731582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 10, 116 | 
| Conread position: | 267-576 | 
| Cow position: | chr6:12652011-12652314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 10, 117 | 
| Conread position: | 267-644 | 
| Cow position: | chr6:16191472-16191844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 58 | 
| Conread position: | 267-725 | 
| Cow position: | chr6:21456885-21456421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 10, 120 | 
| Conread position: | 270-473 | 
| Cow position: | chr6:8187711-8187510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 6, 103 | 
| Conread position: | 281-712 | 
| Cow position: | chr6:12668927-12669340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 353, 73 | 
| Conread position: | 281-715 | 
| Cow position: | chr6:11246585-11247015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 11 | 
| Conread position: | 282-678 | 
| Cow position: | chr6:19012890-19013271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 166, 55 | 
| Conread position: | 283-434 | 
| Cow position: | chr6:37783236-37783389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 25, 114 | 
| Conread position: | 283-626 | 
| Cow position: | chr6:65259645-65259336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 284-436 | 
| Cow position: | chr6:37246607-37246451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 46, 103 | 
| Conread position: | 284-439 | 
| Cow position: | chr6:37603346-37603495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 75, 99 | 
| Conread position: | 284-482 | 
| Cow position: | chr6:18968950-18968763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 284-534 | 
| Cow position: | chr6:25008537-25008782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 75, 87 | 
| Conread position: | 284-595 | 
| Cow position: | chr6:54936400-54936705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 42, 101 | 
| Conread position: | 284-611 | 
| Cow position: | chr6:26910046-26909731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 47, 115 | 
| Conread position: | 284-613 | 
| Cow position: | chr6:1499461-1499784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 26, 21 | 
| Conread position: | 284-614 | 
| Cow position: | chr6:16423522-16423846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 58, 79 | 
| Conread position: | 284-617 | 
| Cow position: | chr6:8788214-8787889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 73, 99 | 
| Conread position: | 284-621 | 
| Cow position: | chr6:52901064-52901390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 236, 36 | 
| Conread position: | 284-689 | 
| Cow position: | chr6:52412677-52413081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 116 | 
| Conread position: | 284-707 | 
| Cow position: | chr6:53519800-53519391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 284-709 | 
| Cow position: | chr6:6226847-6227247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 54, 31 | 
| Conread position: | 284-709 | 
| Cow position: | chr6:50577343-50577754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 58, 116 | 
| Conread position: | 284-720 | 
| Cow position: | chr6:6400771-6401215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 58 | 
| Conread position: | 284-728 | 
| Cow position: | chr6:1703637-1704054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 50, 104 | 
| Conread position: | 284-732 | 
| Cow position: | chr6:37467716-37467273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 100 | 
| Conread position: | 285-484 | 
| Cow position: | chr6:57274293-57274489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 72, 56 | 
| Conread position: | 285-523 | 
| Cow position: | chr6:49604507-49604729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 285-672 | 
| Cow position: | chr6:47799122-47799495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 39 | 
| Conread position: | 285-724 | 
| Cow position: | chr6:32518049-32517636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 101, 61 | 
| Conread position: | 286-466 | 
| Cow position: | chr6:67436813-67436990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 69, 91 | 
| Conread position: | 286-530 | 
| Cow position: | chr6:9838987-9839232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 205 | 
| Conread position: | 286-586 | 
| Cow position: | chr6:30973866-30974159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 47, 74 | 
| Conread position: | 286-712 | 
| Cow position: | chr6:44566237-44566668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 55, 77 | 
| Conread position: | 286-716 | 
| Cow position: | chr6:59104433-59104850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 240, 87 | 
| Conread position: | 286-726 | 
| Cow position: | chr6:8125157-8125584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 250, 61 | 
| Conread position: | 286-726 | 
| Cow position: | chr6:59798493-59798903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 293, 44 | 
| Conread position: | 287-645 | 
| Cow position: | chr6:35993403-35993757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 101 | 
| Conread position: | 287-709 | 
| Cow position: | chr6:60819341-60819754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 97 | 
| Conread position: | 288-722 | 
| Cow position: | chr6:65264708-65264299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 237, 49 | 
| Conread position: | 289-643 | 
| Cow position: | chr6:17334229-17333879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 59, 96 | 
| Conread position: | 289-709 | 
| Cow position: | chr6:47355652-47356065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 95 | 
| Conread position: | 290-482 | 
| Cow position: | chr6:54287909-54288090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 290-727 | 
| Cow position: | chr6:27888179-27888600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 10 | 
| Conread position: | 290-728 | 
| Cow position: | chr6:17313559-17313996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 98 | 
| Conread position: | 291-696 | 
| Cow position: | chr6:5114217-5113821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 50, 94 | 
| Conread position: | 291-717 | 
| Cow position: | chr6:15447378-15446945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 98 | 
| Conread position: | 292-480 | 
| Cow position: | chr6:37739017-37739202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 65, 91 | 
| Conread position: | 292-727 | 
| Cow position: | chr6:53453599-53454023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 67, 90 | 
| Conread position: | 293-521 | 
| Cow position: | chr6:58364180-58363956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 50, 92 | 
| Conread position: | 294-582 | 
| Cow position: | chr6:31854185-31854467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 44, 94 | 
| Conread position: | 294-610 | 
| Cow position: | chr6:47640604-47640291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 46, 94 | 
| Conread position: | 294-645 | 
| Cow position: | chr6:16764809-16764470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 233, 41 | 
| Conread position: | 296-530 | 
| Cow position: | chr6:40834638-40834408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 39, 92 | 
| Conread position: | 296-727 | 
| Cow position: | chr6:60850555-60850125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 47, 92 | 
| Conread position: | 297-530 | 
| Cow position: | chr6:44984162-44984390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 44, 90 | 
| Conread position: | 297-723 | 
| Cow position: | chr6:48988274-48988688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 62, 25 | 
| Conread position: | 297-728 | 
| Cow position: | chr6:60783706-60784129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 234, 84 | 
| Conread position: | 298-465 | 
| Cow position: | chr6:32987161-32986998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 59, 85 | 
| Conread position: | 298-523 | 
| Cow position: | chr6:59108779-59108998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 61, 32 | 
| Conread position: | 298-724 | 
| Cow position: | chr6:15243088-15243515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 28, 90 | 
| Conread position: | 298-726 | 
| Cow position: | chr6:14914402-14913979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 188, 52 | 
| Conread position: | 299-524 | 
| Cow position: | chr6:54492621-54492402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 27, 102 | 
| Conread position: | 299-530 | 
| Cow position: | chr6:12543095-12542870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 56, 85 | 
| Conread position: | 300-461 | 
| Cow position: | chr6:50020369-50020533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 41, 88 | 
| Conread position: | 301-595 | 
| Cow position: | chr6:55763694-55763979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 61, 82 | 
| Conread position: | 301-710 | 
| Cow position: | chr6:120079-120477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 87 | 
| Conread position: | 301-725 | 
| Cow position: | chr6:31847380-31846990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 58, 76 | 
| Conread position: | 302-612 | 
| Cow position: | chr6:48112045-48112339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 226, 39 | 
| Conread position: | 302-732 | 
| Cow position: | chr6:3595634-3596060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 51 | 
| Conread position: | 308-723 | 
| Cow position: | chr6:27605496-27605084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 79, 33 | 
| Conread position: | 308-728 | 
| Cow position: | chr6:54036288-54035882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 49, 76 | 
| Conread position: | 309-530 | 
| Cow position: | chr6:57298868-57299075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 309-594 | 
| Cow position: | chr6:61608355-61608637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 32, 79 | 
| Conread position: | 309-639 | 
| Cow position: | chr6:67323164-67323479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 49, 75 | 
| Conread position: | 309-699 | 
| Cow position: | chr6:19755229-19754849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 69, 32 | 
| Conread position: | 309-699 | 
| Cow position: | chr6:60739863-60740239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 75 | 
| Conread position: | 309-703 | 
| Cow position: | chr6:19446108-19446486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 26 | 
| Conread position: | 309-705 | 
| Cow position: | chr6:19264652-19264266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 28, 79 | 
| Conread position: | 309-709 | 
| Cow position: | chr6:19292660-19293037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 156, 26 | 
| Conread position: | 309-709 | 
| Cow position: | chr6:57546368-57545990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 25, 77 | 
| Conread position: | 309-714 | 
| Cow position: | chr6:4692136-4691720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 73 | 
| Conread position: | 309-715 | 
| Cow position: | chr6:3464132-3464536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 49, 32 | 
| Conread position: | 309-729 | 
| Cow position: | chr6:7128552-7128144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 205, 72 | 
| Conread position: | 310-716 | 
| Cow position: | chr6:58370593-58370993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 49, 20 | 
| Conread position: | 311-472 | 
| Cow position: | chr6:49694225-49694388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 26, 52 | 
| Conread position: | 312-709 | 
| Cow position: | chr6:9219124-9219502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 47, 72 | 
| Conread position: | 312-709 | 
| Cow position: | chr6:55186716-55186329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 49, 14 | 
| Conread position: | 312-729 | 
| Cow position: | chr6:22254136-22253699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 45, 72 | 
| Conread position: | 313-481 | 
| Cow position: | chr6:59296854-59297019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 46, 8 | 
| Conread position: | 313-709 | 
| Cow position: | chr6:46283146-46282753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 46, 28 | 
| Conread position: | 314-523 | 
| Cow position: | chr6:21052653-21052454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 314-627 | 
| Cow position: | chr6:57571326-57571637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 20, 74 | 
| Conread position: | 314-705 | 
| Cow position: | chr6:17817132-17816760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 80, 28 | 
| Conread position: | 315-521 | 
| Cow position: | chr6:29266059-29266255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 316-509 | 
| Cow position: | chr6:602948-603135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 88, 64 | 
| Conread position: | 316-529 | 
| Cow position: | chr6:19351299-19351099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 43, 68 | 
| Conread position: | 316-610 | 
| Cow position: | chr6:20206128-20206416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 13, 80 | 
| Conread position: | 316-637 | 
| Cow position: | chr6:16316166-16316484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 138, 14 | 
| Conread position: | 316-644 | 
| Cow position: | chr6:582412-582100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 232, 36 | 
| Conread position: | 320-456 | 
| Cow position: | chr6:50509537-50509667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 38, 64 | 
| Conread position: | 320-706 | 
| Cow position: | chr6:19996479-19996851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 37 | 
| Conread position: | 320-709 | 
| Cow position: | chr6:43590430-43590037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 37, 45 | 
| Conread position: | 320-713 | 
| Cow position: | chr6:4559444-4559060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 33, 37 | 
| Conread position: | 320-713 | 
| Cow position: | chr6:38609827-38610217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 39, 64 | 
| Conread position: | 323-642 | 
| Cow position: | chr6:3081268-3080943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 37, 61 | 
| Conread position: | 323-711 | 
| Cow position: | chr6:43135082-43134699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 98 | 
| Conread position: | 323-723 | 
| Cow position: | chr6:48803779-48803391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 18, 66 | 
| Conread position: | 325-710 | 
| Cow position: | chr6:21234909-21235287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 35, 11 | 
| Conread position: | 325-717 | 
| Cow position: | chr6:60118010-60118389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 16, 59 | 
| Conread position: | 325-718 | 
| Cow position: | chr6:45388195-45388569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 34, 5 | 
| Conread position: | 325-731 | 
| Cow position: | chr6:21399888-21399493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 41, 5 | 
| Conread position: | 326-728 | 
| Cow position: | chr6:30123327-30122909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 34, 58 | 
| Conread position: | 330-730 | 
| Cow position: | chr6:53841630-53841244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 28, 61 | 
| Conread position: | 333-509 | 
| Cow position: | chr6:358018-357847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 26, 51 | 
| Conread position: | 334-717 | 
| Cow position: | chr6:16266596-16266976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 197, 18 | 
| Conread position: | 335-530 | 
| Cow position: | chr6:38233834-38234019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 335-620 | 
| Cow position: | chr6:60667295-60667561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 197, 21 | 
| Conread position: | 335-696 | 
| Cow position: | chr6:31814863-31814520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 23, 49 | 
| Conread position: | 335-728 | 
| Cow position: | chr6:1371353-1370972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 106, 21 | 
| Conread position: | 335-729 | 
| Cow position: | chr6:62669748-62670130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 194, 21 | 
| Conread position: | 336-524 | 
| Cow position: | chr6:33150531-33150354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 337-709 | 
| Cow position: | chr6:50467011-50467377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 22, 47 | 
| Conread position: | 339-534 | 
| Cow position: | chr6:5413697-5413886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 20, 58 | 
| Conread position: | 339-621 | 
| Cow position: | chr6:54573121-54573411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 20, 57 | 
| Conread position: | 342-487 | 
| Cow position: | chr6:44540561-44540421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 14, 78 | 
| Conread position: | 342-529 | 
| Cow position: | chr6:44127487-44127670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 17, 41 | 
| Conread position: | 342-645 | 
| Cow position: | chr6:36189578-36189873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 18, 49 | 
| Conread position: | 342-697 | 
| Cow position: | chr6:16261667-16262008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 194, 17 | 
| Conread position: | 343-637 | 
| Cow position: | chr6:21590575-21590876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 106, 38 | 
| Conread position: | 344-608 | 
| Cow position: | chr6:12845262-12845514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 15, 132 | 
| Conread position: | 344-725 | 
| Cow position: | chr6:54854132-54854508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 16, 40 | 
| Conread position: | 345-669 | 
| Cow position: | chr6:21514735-21514407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 134 | 
| Conread position: | 346-640 | 
| Cow position: | chr6:55161352-55161641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 121, 36 | 
| Conread position: | 346-728 | 
| Cow position: | chr6:55209441-55209819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 13, 38 | 
| Conread position: | 347-709 | 
| Cow position: | chr6:59603319-59602976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 179, 35 | 
| Conread position: | 349-699 | 
| Cow position: | chr6:8161810-8161456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 21, 10 | 
| Conread position: | 350-530 | 
| Cow position: | chr6:54365120-54364938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 16, 11 | 
| Conread position: | 356-495 | 
| Cow position: | chr6:61644939-61644801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 125, 26 | 
| Conread position: | 356-705 | 
| Cow position: | chr6:59718693-59719046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 179, 33 | 
| Conread position: | 356-709 | 
| Cow position: | chr6:10039618-10039965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 182, 26 | 
| Conread position: | 356-712 | 
| Cow position: | chr6:22850348-22850010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 170, 26 | 
| Conread position: | 356-712 | 
| Cow position: | chr6:62371284-62370945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 116 | 
| Conread position: | 356-728 | 
| Cow position: | chr6:17704716-17705092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 100, 24 | 
| Conread position: | 356-728 | 
| Cow position: | chr6:54208242-54207874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 175, 20 | 
| Conread position: | 357-717 | 
| Cow position: | chr6:1429537-1429881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 56, 25 | 
| Conread position: | 358-646 | 
| Cow position: | chr6:3592300-3592574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 142, 24 | 
| Conread position: | 359-732 | 
| Cow position: | chr6:27240106-27239744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 170, 21 | 
| Conread position: | 360-629 | 
| Cow position: | chr6:54809490-54809228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 190, 22 | 
| Conread position: | 360-717 | 
| Cow position: | chr6:46173357-46173011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 167, 86 | 
| Conread position: | 360-731 | 
| Cow position: | chr6:51526392-51526749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 192, 20 | 
| Conread position: | 364-725 | 
| Cow position: | chr6:44867636-44867294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 186, 28 | 
| Conread position: | 369-690 | 
| Cow position: | chr6:9719014-9718697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 112, 13 | 
| Conread position: | 369-727 | 
| Cow position: | chr6:33509693-33510046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 97 | 
| Conread position: | 370-624 | 
| Cow position: | chr6:58608534-58608289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 181, 93 | 
| Conread position: | 370-717 | 
| Cow position: | chr6:67281802-67282141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 162, 90 | 
| Conread position: | 375-731 | 
| Cow position: | chr6:13510085-13510433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 155, 25 | 
| Conread position: | 378-657 | 
| Cow position: | chr6:36284155-36284429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 153, 93 | 
| Conread position: | 378-711 | 
| Cow position: | chr6:40049981-40050316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 11, 86 | 
| Conread position: | 380-731 | 
| Cow position: | chr6:5330330-5330672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 37 | 
| Conread position: | 381-645 | 
| Cow position: | chr6:23466113-23465857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 152, 88 | 
| Conread position: | 381-705 | 
| Cow position: | chr6:22985942-22985627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 147, 82 | 
| Conread position: | 381-717 | 
| Cow position: | chr6:24339200-24339536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 163, 37 | 
| Conread position: | 382-627 | 
| Cow position: | chr6:39137778-39138033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 82, 181 | 
| Conread position: | 382-696 | 
| Cow position: | chr6:2584853-2585167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 17, 105 | 
| Conread position: | 383-669 | 
| Cow position: | chr6:2153673-2153397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 82, 18 | 
| Conread position: | 384-716 | 
| Cow position: | chr6:25615188-25614844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 14, 251 | 
| Conread position: | 384-723 | 
| Cow position: | chr6:46274208-46273881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 58, 14 | 
| Conread position: | 385-699 | 
| Cow position: | chr6:22525253-22525554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 153, 17 | 
| Conread position: | 385-717 | 
| Cow position: | chr6:8599926-8600254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 166, 11 | 
| Conread position: | 385-727 | 
| Cow position: | chr6:24536621-24536269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 12 | 
| Conread position: | 386-709 | 
| Cow position: | chr6:16288131-16287828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 262, 81 | 
| Conread position: | 386-716 | 
| Cow position: | chr6:19045546-19045875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 10, 80 | 
| Conread position: | 387-617 | 
| Cow position: | chr6:37462944-37463170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 86, 42 | 
| Conread position: | 387-726 | 
| Cow position: | chr6:13565006-13565340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 387-727 | 
| Cow position: | chr6:17549059-17548713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 88, 164 | 
| Conread position: | 387-729 | 
| Cow position: | chr6:23025190-23024836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 78, 12 | 
| Conread position: | 388-699 | 
| Cow position: | chr6:60150788-60150474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 150, 27 | 
| Conread position: | 388-726 | 
| Cow position: | chr6:23402067-23401737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 137, 90 | 
| Conread position: | 389-709 | 
| Cow position: | chr6:694223-693906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 127, 49 | 
| Conread position: | 389-728 | 
| Cow position: | chr6:37395483-37395143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 9 | 
| Conread position: | 390-724 | 
| Cow position: | chr6:46462473-46462126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 93, 28 | 
| Conread position: | 391-712 | 
| Cow position: | chr6:581818-581498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 198, 74 | 
| Conread position: | 392-728 | 
| Cow position: | chr6:5845246-5844910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 9, 72 | 
| Conread position: | 394-693 | 
| Cow position: | chr6:61524272-61523981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 139, 44 | 
| Conread position: | 394-710 | 
| Cow position: | chr6:17068720-17068415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 130, 77 | 
| Conread position: | 395-716 | 
| Cow position: | chr6:23353483-23353802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 132, 80 | 
| Conread position: | 396-714 | 
| Cow position: | chr6:18118121-18117804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 150, 83 | 
| Conread position: | 396-716 | 
| Cow position: | chr6:32043783-32044096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 130, 42 | 
| Conread position: | 396-718 | 
| Cow position: | chr6:68272512-68272851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 70, 35 | 
| Conread position: | 397-607 | 
| Cow position: | chr6:54600278-54600486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 130, 66 | 
| Conread position: | 397-713 | 
| Cow position: | chr6:9302784-9302480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 13, 67 | 
| Conread position: | 398-718 | 
| Cow position: | chr6:6724436-6724757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 56, 74 | 
| Conread position: | 400-645 | 
| Cow position: | chr6:35896405-35896178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 401-727 | 
| Cow position: | chr6:60468173-60468485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 131, 74 | 
| Conread position: | 406-730 | 
| Cow position: | chr6:51530245-51529928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 36, 65 | 
| Conread position: | 407-705 | 
| Cow position: | chr6:18144135-18144436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 125, 31 | 
| Conread position: | 408-708 | 
| Cow position: | chr6:6195168-6194864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 108, 76 | 
| Conread position: | 408-727 | 
| Cow position: | chr6:7627905-7628225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 121, 70 | 
| Conread position: | 409-613 | 
| Cow position: | chr6:17527644-17527445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 116, 61 | 
| Conread position: | 412-731 | 
| Cow position: | chr6:18608868-18608547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 117, 66 | 
| Conread position: | 413-710 | 
| Cow position: | chr6:60144251-60143959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 55, 72 | 
| Conread position: | 418-696 | 
| Cow position: | chr6:68816119-68816396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 110, 47 | 
| Conread position: | 418-712 | 
| Cow position: | chr6:53145730-53145438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 112, 57 | 
| Conread position: | 418-713 | 
| Cow position: | chr6:68652400-68652122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 107, 57 | 
| Conread position: | 419-728 | 
| Cow position: | chr6:94236-93941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 117, 43 | 
| Conread position: | 419-732 | 
| Cow position: | chr6:3350973-3351293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 46, 136 | 
| Conread position: | 420-717 | 
| Cow position: | chr6:2078865-2078569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 68, 48 | 
| Conread position: | 420-722 | 
| Cow position: | chr6:16640713-16641003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 226, 26 | 
| Conread position: | 420-726 | 
| Cow position: | chr6:55417572-55417276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 97, 51 | 
| Conread position: | 420-727 | 
| Cow position: | chr6:56986691-56986393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 5, 52 | 
| Conread position: | 421-699 | 
| Cow position: | chr6:7119664-7119401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 107, 50 | 
| Conread position: | 421-711 | 
| Cow position: | chr6:47958768-47959046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 229, 57 | 
| Conread position: | 421-717 | 
| Cow position: | chr6:62437370-62437664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 115, 31 | 
| Conread position: | 421-727 | 
| Cow position: | chr6:68376369-68376061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 89, 73 | 
| Conread position: | 422-645 | 
| Cow position: | chr6:55535792-55535576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 113, 49 | 
| Conread position: | 422-710 | 
| Cow position: | chr6:67451415-67451132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 129, 15 | 
| Conread position: | 422-718 | 
| Cow position: | chr6:12964810-12965102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 116, 12 | 
| Conread position: | 423-727 | 
| Cow position: | chr6:7801436-7801143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 222, 61 | 
| Conread position: | 424-708 | 
| Cow position: | chr6:58725324-58725605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 27, 9 | 
| Conread position: | 425-709 | 
| Cow position: | chr6:6229656-6229925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 63, 32 | 
| Conread position: | 426-646 | 
| Cow position: | chr6:44623568-44623789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 99, 57 | 
| Conread position: | 426-728 | 
| Cow position: | chr6:24183595-24183298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 110, 39 | 
| Conread position: | 428-732 | 
| Cow position: | chr6:67728333-67728641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 48, 40 | 
| Conread position: | 431-695 | 
| Cow position: | chr6:61681038-61681303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 46, 60 | 
| Conread position: | 432-709 | 
| Cow position: | chr6:3329954-3330235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 96, 33 | 
| Conread position: | 435-728 | 
| Cow position: | chr6:47778843-47779136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 101, 33 | 
| Conread position: | 440-713 | 
| Cow position: | chr6:50504428-50504699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 25, 38 | 
| Conread position: | 440-717 | 
| Cow position: | chr6:57089171-57089451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 91, 33 | 
| Conread position: | 440-723 | 
| Cow position: | chr6:47540872-47540587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 85, 12 | 
| Conread position: | 441-717 | 
| Cow position: | chr6:63065800-63066088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 16, 29 | 
| Conread position: | 441-718 | 
| Cow position: | chr6:41015001-41014725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 97, 27 | 
| Conread position: | 441-727 | 
| Cow position: | chr6:1941862-1941575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 27, 51 | 
| Conread position: | 442-728 | 
| Cow position: | chr6:62683343-62683634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 28, 43 | 
| Conread position: | 443-671 | 
| Cow position: | chr6:55502743-55502974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 107, 32 | 
| Conread position: | 443-725 | 
| Cow position: | chr6:53546013-53546283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 83, 25 | 
| Conread position: | 444-727 | 
| Cow position: | chr6:21293518-21293239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 51, 24 | 
| Conread position: | 445-728 | 
| Cow position: | chr6:50862920-50863205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 98, 23 | 
| Conread position: | 446-716 | 
| Cow position: | chr6:42567472-42567741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 90, 22 | 
| Conread position: | 447-727 | 
| Cow position: | chr6:35727823-35728106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 6, 10 | 
| Conread position: | 448-709 | 
| Cow position: | chr6:35319153-35318895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 7, 19 | 
| Conread position: | 449-727 | 
| Cow position: | chr6:62056596-62056873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 80, 16 | 
| Conread position: | 453-700 | 
| Cow position: | chr6:48379628-48379381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 85, 18 | 
| Conread position: | 462-709 | 
| Cow position: | chr6:21475720-21475964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 63, 28 | 
| Conread position: | 462-724 | 
| Cow position: | chr6:57079417-57079680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 87, 13 | 
| Conread position: | 462-728 | 
| Cow position: | chr6:43787916-43787654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 69, 29 | 
| Conread position: | 462-729 | 
| Cow position: | chr6:8731400-8731674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 66, 129 | 
| Conread position: | 464-731 | 
| Cow position: | chr6:13653347-13653608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 180, 72 | 
| Conread position: | 465-726 | 
| Cow position: | chr6:67069818-67069558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 49, 22 | 
| Conread position: | 465-727 | 
| Cow position: | chr6:26155142-26155402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 9, 71 | 
| Conread position: | 465-728 | 
| Cow position: | chr6:8688852-8688592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 86, 71 | 
| Conread position: | 469-709 | 
| Cow position: | chr6:54831476-54831717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 61, 21 | 
| Conread position: | 471-728 | 
| Cow position: | chr6:61109790-61110039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 80, 13 | 
| Conread position: | 472-722 | 
| Cow position: | chr6:66839202-66839448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 235, 12 | 
| Conread position: | 474-727 | 
| Cow position: | chr6:58304419-58304670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 62, 14 | 
| Conread position: | 475-711 | 
| Cow position: | chr6:55404912-55405156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 49, 15 | 
| Conread position: | 475-731 | 
| Cow position: | chr6:55548529-55548273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 61, 84 | 
| Conread position: | 477-729 | 
| Cow position: | chr6:21715053-21715311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 13, 79 | 
| Conread position: | 478-726 | 
| Cow position: | chr6:50269674-50269425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 53, 12 | 
| Conread position: | 480-710 | 
| Cow position: | chr6:21470418-21470192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 58, 10 | 
| Conread position: | 480-729 | 
| Cow position: | chr6:48097594-48097347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 57, 168 | 
| Conread position: | 484-710 | 
| Cow position: | chr6:67574402-67574630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 30, 11 | 
| Conread position: | 485-724 | 
| Cow position: | chr6:1866748-1866988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 50, 6 | 
| Conread position: | 485-728 | 
| Cow position: | chr6:47245796-47246037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 45, 27 | 
| Conread position: | 486-710 | 
| Cow position: | chr6:30023901-30024117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 44, 66 | 
| Conread position: | 487-713 | 
| Cow position: | chr6:56799882-56799648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 40, 143 | 
| Conread position: | 488-728 | 
| Cow position: | chr6:50771341-50771104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 159, 48 | 
| Conread position: | 489-705 | 
| Cow position: | chr6:45094585-45094813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 492-713 | 
| Cow position: | chr6:69374811-69374591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 58, 44 | 
| Conread position: | 493-716 | 
| Cow position: | chr6:8365834-8366060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 44, 56 | 
| Conread position: | 495-707 | 
| Cow position: | chr6:33150267-33150057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 35, 59 | 
| Conread position: | 496-728 | 
| Cow position: | chr6:1090606-1090839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 35, 56 | 
| Conread position: | 496-728 | 
| Cow position: | chr6:28851999-28852234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 42, 56 | 
| Conread position: | 496-728 | 
| Cow position: | chr6:34560978-34560740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 40, 55 | 
| Conread position: | 496-728 | 
| Cow position: | chr6:42728671-42728903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 40, 56 | 
| Conread position: | 496-728 | 
| Cow position: | chr6:54846253-54846014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 40, 56 | 
| Conread position: | 496-731 | 
| Cow position: | chr6:47648210-47647973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 30, 56 | 
| Conread position: | 500-717 | 
| Cow position: | chr6:66259759-66259984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 42, 36 | 
| Conread position: | 500-723 | 
| Cow position: | chr6:48435864-48436083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 145, 36 | 
| Conread position: | 501-727 | 
| Cow position: | chr6:16090934-16091153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 32, 51 | 
| Conread position: | 503-727 | 
| Cow position: | chr6:22876898-22876671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 33, 44 | 
| Conread position: | 505-717 | 
| Cow position: | chr6:8468700-8468906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 31, 47 | 
| Conread position: | 506-732 | 
| Cow position: | chr6:56022519-56022290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 28, 49 | 
| Conread position: | 511-726 | 
| Cow position: | chr6:43906643-43906425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 5, 41 | 
| Conread position: | 512-719 | 
| Cow position: | chr6:62724597-62724807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 24, 42 | 
| Conread position: | 512-728 | 
| Cow position: | chr6:15587553-15587334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 24, 40 | 
| Conread position: | 512-728 | 
| Cow position: | chr6:24776180-24776396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 26, 107 | 
| Conread position: | 512-728 | 
| Cow position: | chr6:44728443-44728230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 19, 40 | 
| Conread position: | 512-728 | 
| Cow position: | chr6:56061702-56061921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 24, 40 | 
| Conread position: | 513-725 | 
| Cow position: | chr6:21184180-21183968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 16, 39 | 
| Conread position: | 515-721 | 
| Cow position: | chr6:23058256-23058466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 11, 37 | 
| Conread position: | 515-731 | 
| Cow position: | chr6:55517920-55518137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 22, 37 | 
| Conread position: | 516-709 | 
| Cow position: | chr6:36225154-36225349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 35, 21 | 
| Conread position: | 516-713 | 
| Cow position: | chr6:19563438-19563236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 20, 36 | 
| Conread position: | 517-727 | 
| Cow position: | chr6:8369471-8369681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 131, 21 | 
| Conread position: | 526-657 | 
| Cow position: | chr6:58076451-58076582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 122, 24 | 
| Conread position: | 526-722 | 
| Cow position: | chr6:50883618-50883427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 125, 26 | 
| Conread position: | 526-726 | 
| Cow position: | chr6:58697574-58697374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 104, 24 | 
| Conread position: | 532-718 | 
| Cow position: | chr6:38032920-38033105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 116, 91 | 
| Conread position: | 534-712 | 
| Cow position: | chr6:4049090-4048908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 534-717 | 
| Cow position: | chr6:67374613-67374428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 10, 92 | 
| Conread position: | 547-711 | 
| Cow position: | chr6:57072500-57072665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 101, 47 | 
| Conread position: | 549-717 | 
| Cow position: | chr6:54406720-54406558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 99, 69 | 
| Conread position: | 549-721 | 
| Cow position: | chr6:32006375-32006205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 99, 87 | 
| Conread position: | 549-729 | 
| Cow position: | chr6:54840428-54840241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 550-679 | 
| Cow position: | chr6:30895911-30895781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 98, 68 | 
| Conread position: | 550-697 | 
| Cow position: | chr6:34380734-34380589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 83, 25 | 
| Conread position: | 550-697 | 
| Cow position: | chr6:61644778-61644629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 550-709 | 
| Cow position: | chr6:7291396-7291550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 105, 76 | 
| Conread position: | 550-709 | 
| Cow position: | chr6:16627815-16627968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 103, 89 | 
| Conread position: | 550-709 | 
| Cow position: | chr6:21175418-21175573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 103, 89 | 
| Conread position: | 550-709 | 
| Cow position: | chr6:26054824-26054661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 550-709 | 
| Cow position: | chr6:26408424-26408263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 550-709 | 
| Cow position: | chr6:50682217-50682060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 98, 13 | 
| Conread position: | 550-709 | 
| Cow position: | chr6:57467677-57467838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 550-713 | 
| Cow position: | chr6:13742069-13742230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 99, 21 | 
| Conread position: | 550-713 | 
| Cow position: | chr6:19225303-19225149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 550-713 | 
| Cow position: | chr6:35985056-35984891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 550-713 | 
| Cow position: | chr6:54820912-54821077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 550-713 | 
| Cow position: | chr6:60186582-60186408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 550-715 | 
| Cow position: | chr6:15058457-15058619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 550-717 | 
| Cow position: | chr6:24903497-24903330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 98, 159 | 
| Conread position: | 550-717 | 
| Cow position: | chr6:29266051-29265872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 550-724 | 
| Cow position: | chr6:8187109-8186929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 550-725 | 
| Cow position: | chr6:54679608-54679787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 550-726 | 
| Cow position: | chr6:16502965-16502786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 81, 128 | 
| Conread position: | 550-726 | 
| Cow position: | chr6:49685898-49686076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 550-728 | 
| Cow position: | chr6:28559618-28559799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 51, 75 | 
| Conread position: | 550-728 | 
| Cow position: | chr6:44544068-44543889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 96, 68 | 
| Conread position: | 550-728 | 
| Cow position: | chr6:62224502-62224679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 69, 128 | 
| Conread position: | 550-729 | 
| Cow position: | chr6:55060943-55061133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 550-729 | 
| Cow position: | chr6:66947741-66947561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 97, 78 | 
| Conread position: | 550-731 | 
| Cow position: | chr6:19936489-19936310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 98, 50 | 
| Conread position: | 550-731 | 
| Cow position: | chr6:21052369-21052185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 550-732 | 
| Cow position: | chr6:1173876-1173685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 550-732 | 
| Cow position: | chr6:14150299-14150120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 94, 123 | 
| Conread position: | 550-732 | 
| Cow position: | chr6:16411691-16411877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 551-724 | 
| Cow position: | chr6:24651900-24651727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 97, 122 | 
| Conread position: | 551-728 | 
| Cow position: | chr6:47150901-47151075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 98, 73 | 
| Conread position: | 552-697 | 
| Cow position: | chr6:14471445-14471592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 552-697 | 
| Cow position: | chr6:47450839-47450692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 552-709 | 
| Cow position: | chr6:53811665-53811825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 552-709 | 
| Cow position: | chr6:59687730-59687571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 552-709 | 
| Cow position: | chr6:62805725-62805884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 552-712 | 
| Cow position: | chr6:28562086-28561926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 96, 51 | 
| Conread position: | 552-713 | 
| Cow position: | chr6:55919852-55919688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 552-716 | 
| Cow position: | chr6:45159975-45159809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 552-717 | 
| Cow position: | chr6:56581976-56581807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 552-717 | 
| Cow position: | chr6:66293567-66293730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 96, 121 | 
| Conread position: | 552-720 | 
| Cow position: | chr6:45471507-45471334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 552-722 | 
| Cow position: | chr6:14152808-14152639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 78, 109 | 
| Conread position: | 552-724 | 
| Cow position: | chr6:36809122-36808948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 552-724 | 
| Cow position: | chr6:47790717-47790544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 96, 64 | 
| Conread position: | 552-725 | 
| Cow position: | chr6:6614704-6614879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 69, 34 | 
| Conread position: | 552-726 | 
| Cow position: | chr6:18440395-18440223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 93, 126 | 
| Conread position: | 552-726 | 
| Cow position: | chr6:32336114-32336294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 79, 158 | 
| Conread position: | 552-726 | 
| Cow position: | chr6:45980104-45979928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 95, 162 | 
| Conread position: | 552-727 | 
| Cow position: | chr6:28088965-28088790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 98, 50 | 
| Conread position: | 552-727 | 
| Cow position: | chr6:68594068-68594246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 56, 129 | 
| Conread position: | 552-728 | 
| Cow position: | chr6:18776333-18776503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 95, 26 | 
| Conread position: | 552-728 | 
| Cow position: | chr6:36163826-36164004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 552-728 | 
| Cow position: | chr6:55014961-55015140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 68, 131 | 
| Conread position: | 552-729 | 
| Cow position: | chr6:42483497-42483674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 96, 56 | 
| Conread position: | 552-729 | 
| Cow position: | chr6:44474642-44474821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 552-730 | 
| Cow position: | chr6:66329620-66329444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 94, 125 | 
| Conread position: | 552-732 | 
| Cow position: | chr6:16137688-16137506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 56, 162 | 
| Conread position: | 553-709 | 
| Cow position: | chr6:34423375-34423221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 95, 75 | 
| Conread position: | 553-710 | 
| Cow position: | chr6:3936866-3937027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 554-726 | 
| Cow position: | chr6:63020427-63020596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 94, 58 | 
| Conread position: | 555-728 | 
| Cow position: | chr6:49825010-49824834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 18, 59 | 
| Conread position: | 556-720 | 
| Cow position: | chr6:50445031-50444863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 557-700 | 
| Cow position: | chr6:29496080-29496222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 91, 121 | 
| Conread position: | 557-709 | 
| Cow position: | chr6:55945876-55945717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 557-713 | 
| Cow position: | chr6:26764740-26764579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 557-725 | 
| Cow position: | chr6:12099599-12099433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 104, 81 | 
| Conread position: | 557-728 | 
| Cow position: | chr6:31928724-31928897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 558-713 | 
| Cow position: | chr6:57935484-57935333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 90, 16 | 
| Conread position: | 558-721 | 
| Cow position: | chr6:13097312-13097146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 71, 58 | 
| Conread position: | 558-726 | 
| Cow position: | chr6:41657356-41657522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 90, 60 | 
| Conread position: | 558-728 | 
| Cow position: | chr6:35775570-35775743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 558-728 | 
| Cow position: | chr6:54828234-54828059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 73, 89 | 
| Conread position: | 559-721 | 
| Cow position: | chr6:37827857-37827698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 56, 12 | 
| Conread position: | 559-730 | 
| Cow position: | chr6:16016123-16016298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 87, 51 | 
| Conread position: | 560-713 | 
| Cow position: | chr6:21347060-21346910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 560-717 | 
| Cow position: | chr6:66302515-66302358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 58, 85 | 
| Conread position: | 563-709 | 
| Cow position: | chr6:15111748-15111596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 563-709 | 
| Cow position: | chr6:53138843-53138699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 92, 16 | 
| Conread position: | 563-713 | 
| Cow position: | chr6:57320504-57320355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 85, 60 | 
| Conread position: | 564-717 | 
| Cow position: | chr6:23381574-23381419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 567-726 | 
| Cow position: | chr6:55196310-55196470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 57, 147 | 
| Conread position: | 571-727 | 
| Cow position: | chr6:60088375-60088218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 84, 52 | 
| Conread position: | 572-717 | 
| Cow position: | chr6:57143594-57143445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 572-728 | 
| Cow position: | chr6:34076269-34076422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 83, 57 | 
| Conread position: | 587-715 | 
| Cow position: | chr6:65831478-65831608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 598-728 | 
| Cow position: | chr6:51019277-51019409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 598-731 | 
| Cow position: | chr6:16738741-16738874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 50, 118 | 
Show alignments to all cow chromosomes.
