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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010098A10.5
        

               
Conread position:
               
1-245
               

               
Cow position:
               
chr16:51531230-51530979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr16:8522644-8522421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
7-268
               

               
Cow position:
               
chr16:26676942-26676672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr16:14568740-14568473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 149
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr16:49230023-49229752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
8-264
               

               
Cow position:
               
chr16:21904908-21905173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 174
               

               
Conread position:
               
10-245
               

               
Cow position:
               
chr16:675242-675477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
89, 178
               

               
Conread position:
               
10-253
               

               
Cow position:
               
chr16:8812338-8812085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
106, 48
               

               
Conread position:
               
10-270
               

               
Cow position:
               
chr16:26342026-26342282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
132, 79
               

               
Conread position:
               
11-204
               

               
Cow position:
               
chr16:56846147-56845948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 157
               

               
Conread position:
               
11-270
               

               
Cow position:
               
chr16:6692863-6692585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 111
               

               
Conread position:
               
13-222
               

               
Cow position:
               
chr16:11422062-11422268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 188
               

               
Conread position:
               
14-252
               

               
Cow position:
               
chr16:54665050-54664810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
86, 146
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr16:15824689-15824476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
15-236
               

               
Cow position:
               
chr16:23025095-23025326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
16-245
               

               
Cow position:
               
chr16:5741008-5741228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
180, 60
               

               
Conread position:
               
16-270
               

               
Cow position:
               
chr16:7665385-7665653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 210
               

               
Conread position:
               
17-235
               

               
Cow position:
               
chr16:24616537-24616761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
17-270
               

               
Cow position:
               
chr16:56082605-56082349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 123
               

               
Conread position:
               
19-232
               

               
Cow position:
               
chr16:29399751-29399976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
19-243
               

               
Cow position:
               
chr16:50382958-50383187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 128
               

               
Conread position:
               
19-270
               

               
Cow position:
               
chr16:9932915-9933177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
21-148
               

               
Cow position:
               
chr16:20662909-20663037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
21-178
               

               
Cow position:
               
chr16:16543832-16543992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 61
               

               
Conread position:
               
21-188
               

               
Cow position:
               
chr16:33235374-33235204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
21-223
               

               
Cow position:
               
chr16:28816336-28816130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
21-237
               

               
Cow position:
               
chr16:41608368-41608591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
21-245
               

               
Cow position:
               
chr16:35623485-35623256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr16:14028855-14028622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
172, 25
               

               
Conread position:
               
21-262
               

               
Cow position:
               
chr16:4626635-4626383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
21-270
               

               
Cow position:
               
chr16:12249573-12249839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
22-223
               

               
Cow position:
               
chr16:47643180-47643377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
166, 78
               

               
Conread position:
               
22-236
               

               
Cow position:
               
chr16:48424752-48424971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
22-270
               

               
Cow position:
               
chr16:24747067-24747302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
23-227
               

               
Cow position:
               
chr16:7427105-7426890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 90
               

               
Conread position:
               
23-269
               

               
Cow position:
               
chr16:5636354-5636602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
140, 75
               

               
Conread position:
               
24-143
               

               
Cow position:
               
chr16:16932761-16932878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
24-145
               

               
Cow position:
               
chr16:8796464-8796344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
24-160
               

               
Cow position:
               
chr16:51556541-51556407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
24-177
               

               
Cow position:
               
chr16:7619432-7619279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
124, 19
               

               
Conread position:
               
24-193
               

               
Cow position:
               
chr16:29655089-29655262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
24-198
               

               
Cow position:
               
chr16:30639105-30639280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 133
               

               
Conread position:
               
24-212
               

               
Cow position:
               
chr16:2308448-2308640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 91
               

               
Conread position:
               
24-215
               

               
Cow position:
               
chr16:19003756-19003567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
24-216
               

               
Cow position:
               
chr16:3918293-3918489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
24-219
               

               
Cow position:
               
chr16:17867711-17867512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chr16:22008909-22009121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 135
               

               
Conread position:
               
24-224
               

               
Cow position:
               
chr16:6379347-6379142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
24-227
               

               
Cow position:
               
chr16:7639759-7639959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
24-230
               

               
Cow position:
               
chr16:50417924-50417715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 145
               

               
Conread position:
               
24-231
               

               
Cow position:
               
chr16:23472514-23472720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
125, 76
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr16:23563900-23564112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
118, 85
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr16:55586837-55586623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
24-235
               

               
Cow position:
               
chr16:54515491-54515702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
126, 56
               

               
Conread position:
               
24-236
               

               
Cow position:
               
chr16:49579843-49580061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 189
               

               
Conread position:
               
24-237
               

               
Cow position:
               
chr16:18402460-18402663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
169, 65
               

               
Conread position:
               
24-241
               

               
Cow position:
               
chr16:53547823-53547607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
140, 177
               

               
Conread position:
               
24-242
               

               
Cow position:
               
chr16:7152410-7152190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
98, 210
               

               
Conread position:
               
24-243
               

               
Cow position:
               
chr16:11274672-11274889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
76, 130
               

               
Conread position:
               
24-243
               

               
Cow position:
               
chr16:32385057-32384838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
169, 119
               

               
Conread position:
               
24-244
               

               
Cow position:
               
chr16:7997849-7997635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 51
               

               
Conread position:
               
24-244
               

               
Cow position:
               
chr16:24825833-24826056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 220
               

               
Conread position:
               
24-255
               

               
Cow position:
               
chr16:16545835-16546070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 91
               

               
Conread position:
               
24-267
               

               
Cow position:
               
chr16:15370442-15370697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
24-267
               

               
Cow position:
               
chr16:47510204-47509964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
171, 20
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr16:10032389-10032653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr16:17745598-17745850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 113
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr16:33411223-33411483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr16:54578931-54579181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 20
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr16:8193208-8193468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr16:19976731-19976986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 192
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr16:25839377-25839635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr16:37452851-37452599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr16:39514315-39514058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr16:40561990-40562247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr16:45813932-45813681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
132, 19
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr16:4399485-4399751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
74, 220
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr16:4699207-4698972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
221, 70
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr16:11775287-11775036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 208
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr16:13791276-13791533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr16:14242139-14242387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
170, 76
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr16:42339968-42340212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 76
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr16:43506034-43505789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
171, 20
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr16:49169620-49169365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 74
               

               
Conread position:
               
24-271
               

               
Cow position:
               
chr16:7456702-7456441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
24-271
               

               
Cow position:
               
chr16:45609750-45610002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
92, 117
               

               
Conread position:
               
24-307
               

               
Cow position:
               
chr16:22717362-22717654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
25-152
               

               
Cow position:
               
chr16:33405993-33405868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
25-156
               

               
Cow position:
               
chr16:9235715-9235580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
25-160
               

               
Cow position:
               
chr16:52802404-52802543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
25-161
               

               
Cow position:
               
chr16:41654050-41654189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
25-163
               

               
Cow position:
               
chr16:42073196-42073063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
120, 60
               

               
Conread position:
               
25-173
               

               
Cow position:
               
chr16:18574150-18574304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
25-174
               

               
Cow position:
               
chr16:33777583-33777728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
25-179
               

               
Cow position:
               
chr16:50931879-50931730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
25-183
               

               
Cow position:
               
chr16:16368965-16368806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
25-197
               

               
Cow position:
               
chr16:53989010-53989177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
25-199
               

               
Cow position:
               
chr16:11449533-11449703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
25-201
               

               
Cow position:
               
chr16:902123-901940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
25-203
               

               
Cow position:
               
chr16:47852855-47852673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
25-211
               

               
Cow position:
               
chr16:51043397-51043576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
25-212
               

               
Cow position:
               
chr16:600710-600905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
25-214
               

               
Cow position:
               
chr16:4972261-4972066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
25-215
               

               
Cow position:
               
chr16:47336494-47336688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
25-216
               

               
Cow position:
               
chr16:15408109-15407927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
120, 75
               

               
Conread position:
               
25-216
               

               
Cow position:
               
chr16:35168489-35168684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
25-220
               

               
Cow position:
               
chr16:15255187-15254989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
120, 59
               

               
Conread position:
               
25-221
               

               
Cow position:
               
chr16:8280025-8279830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 100
               

               
Conread position:
               
25-223
               

               
Cow position:
               
chr16:15320705-15320507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
25-223
               

               
Cow position:
               
chr16:19408748-19408552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
169, 68
               

               
Conread position:
               
25-223
               

               
Cow position:
               
chr16:49141794-49141600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
170, 66
               

               
Conread position:
               
25-224
               

               
Cow position:
               
chr16:19757022-19756830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
138, 21
               

               
Conread position:
               
25-226
               

               
Cow position:
               
chr16:33751962-33752164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
25-227
               

               
Cow position:
               
chr16:594465-594258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
25-228
               

               
Cow position:
               
chr16:45046392-45046595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
119, 140
               

               
Conread position:
               
25-231
               

               
Cow position:
               
chr16:4857325-4857130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
25-232
               

               
Cow position:
               
chr16:15188962-15189155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
145, 49
               

               
Conread position:
               
25-233
               

               
Cow position:
               
chr16:56231587-56231802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 187
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr16:4762902-4763109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
171, 62
               

               
Conread position:
               
25-236
               

               
Cow position:
               
chr16:8621014-8621210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
25-236
               

               
Cow position:
               
chr16:29037680-29037889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr16:23990723-23990504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr16:27004964-27005181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr16:52218853-52219057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
143, 75
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr16:52789825-52790029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
25-239
               

               
Cow position:
               
chr16:28191831-28192052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
75, 92
               

               
Conread position:
               
25-240
               

               
Cow position:
               
chr16:34210649-34210430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
89, 204
               

               
Conread position:
               
25-241
               

               
Cow position:
               
chr16:3633056-3633280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
25-241
               

               
Cow position:
               
chr16:5243727-5243955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
74, 189
               

               
Conread position:
               
25-241
               

               
Cow position:
               
chr16:11103061-11102841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
25-241
               

               
Cow position:
               
chr16:47662477-47662694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
127, 90
               

               
Conread position:
               
25-241
               

               
Cow position:
               
chr16:50906233-50906454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
25-242
               

               
Cow position:
               
chr16:3633879-3634093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
25-242
               

               
Cow position:
               
chr16:40333561-40333343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
75, 127
               

               
Conread position:
               
25-242
               

               
Cow position:
               
chr16:43804261-43804474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 165
               

               
Conread position:
               
25-243
               

               
Cow position:
               
chr16:49217801-49217574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
25-245
               

               
Cow position:
               
chr16:48145635-48145411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
25-254
               

               
Cow position:
               
chr16:13969615-13969377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
123, 90
               

               
Conread position:
               
25-258
               

               
Cow position:
               
chr16:7498833-7499059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
170, 18
               

               
Conread position:
               
25-260
               

               
Cow position:
               
chr16:29095718-29095933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
25-262
               

               
Cow position:
               
chr16:23810686-23810919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
170, 57
               

               
Conread position:
               
25-262
               

               
Cow position:
               
chr16:35937100-35937347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
80, 115
               

               
Conread position:
               
25-264
               

               
Cow position:
               
chr16:47820335-47820578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
25-267
               

               
Cow position:
               
chr16:47620144-47620392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 222
               

               
Conread position:
               
25-267
               

               
Cow position:
               
chr16:56831976-56831728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
25-267
               

               
Cow position:
               
chr16:56875889-56875650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 171
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr16:8807326-8807079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
124, 65
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr16:29066932-29067175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
119, 160
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr16:30311345-30311092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
128, 64
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr16:38709062-38708823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
170, 25
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr16:45603443-45603683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
118, 95
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr16:52835115-52834874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr16:52889646-52889396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 153
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:820015-820265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 88
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:3614512-3614762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
171, 88
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:5256767-5257011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:9973738-9973484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:13698272-13698530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:16265335-16265085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:19643659-19643903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
185, 40
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:23681136-23681382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
207, 78
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:29608282-29608525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 99
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:33226768-33226523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
173, 64
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:33507827-33508068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 160
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:36203851-36203609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 91
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:42092612-42092373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
206, 65
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:42777727-42777979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
78, 157
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr16:51500695-51500947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 83
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:238025-238284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:2223643-2223381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:4059123-4059372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
171, 75
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:4712665-4712916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
124, 91
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:13307099-13306856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:18205735-18205975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
170, 73
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:20025208-20025460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:25965270-25965519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
118, 59
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:26373187-26372933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
120, 88
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:28833606-28833859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
160, 49
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:29557867-29557614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:38905462-38905218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 88
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:50282667-50282417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 211
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:50712143-50711887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:51246727-51246963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
128, 54
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr16:55683057-55683316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
74, 97
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr16:1549114-1548861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr16:5415989-5415741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
144, 59
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr16:11008107-11008362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr16:18074495-18074245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 90
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr16:19152461-19152712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 174
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr16:45534947-45535195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 59
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr16:50189830-50189574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
25-275
               

               
Cow position:
               
chr16:41037448-41037712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
74, 196
               

               
Conread position:
               
25-275
               

               
Cow position:
               
chr16:56150077-56150317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
25-277
               

               
Cow position:
               
chr16:44973260-44973517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 44
               

               
Conread position:
               
25-281
               

               
Cow position:
               
chr16:19633009-19632748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 143
               

               
Conread position:
               
25-304
               

               
Cow position:
               
chr16:30096366-30096081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
122, 194
               

               
Conread position:
               
26-156
               

               
Cow position:
               
chr16:33054699-33054572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
26-160
               

               
Cow position:
               
chr16:43724556-43724693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
26-161
               

               
Cow position:
               
chr16:14721978-14721846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
26-161
               

               
Cow position:
               
chr16:44688515-44688381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
26-161
               

               
Cow position:
               
chr16:45157676-45157537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
26-178
               

               
Cow position:
               
chr16:8367059-8366903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
26-184
               

               
Cow position:
               
chr16:32586964-32587121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
121, 137
               

               
Conread position:
               
26-188
               

               
Cow position:
               
chr16:5293427-5293587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 139
               

               
Conread position:
               
26-191
               

               
Cow position:
               
chr16:11790778-11790947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
26-192
               

               
Cow position:
               
chr16:7395553-7395386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
26-192
               

               
Cow position:
               
chr16:9728969-9729138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 102
               

               
Conread position:
               
26-193
               

               
Cow position:
               
chr16:30290081-30290252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
26-193
               

               
Cow position:
               
chr16:35205327-35205497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
26-194
               

               
Cow position:
               
chr16:11615463-11615299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
26-194
               

               
Cow position:
               
chr16:51578655-51578484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
73, 156
               

               
Conread position:
               
26-200
               

               
Cow position:
               
chr16:39616508-39616682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
143, 126
               

               
Conread position:
               
26-202
               

               
Cow position:
               
chr16:55047340-55047159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
26-205
               

               
Cow position:
               
chr16:35343710-35343523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 32
               

               
Conread position:
               
26-206
               

               
Cow position:
               
chr16:29380019-29380204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
26-206
               

               
Cow position:
               
chr16:30715257-30715442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
26-207
               

               
Cow position:
               
chr16:2750756-2750942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
26-207
               

               
Cow position:
               
chr16:18693366-18693187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
26-212
               

               
Cow position:
               
chr16:15726597-15726418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
120, 42
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chr16:32327417-32327610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
169, 127
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chr16:56198283-56198484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
26-224
               

               
Cow position:
               
chr16:31558657-31558859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
26-226
               

               
Cow position:
               
chr16:13181505-13181707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
26-226
               

               
Cow position:
               
chr16:24403495-24403709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
26-226
               

               
Cow position:
               
chr16:43661218-43661410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
169, 58
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr16:3288797-3288987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr16:4875763-4875963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
142, 67
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr16:12169926-12169722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr16:30909166-30908957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
65, 154
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr16:33588433-33588636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 194
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr16:34168360-34168565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
121, 196
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr16:51070163-51069950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr16:53267493-53267692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
142, 73
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr16:55042799-55042589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
26-228
               

               
Cow position:
               
chr16:22850093-22850297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
121, 131
               

               
Conread position:
               
26-229
               

               
Cow position:
               
chr16:48494791-48494587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 127
               

               
Conread position:
               
26-231
               

               
Cow position:
               
chr16:24147919-24148130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
26-232
               

               
Cow position:
               
chr16:29766108-29766311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
126, 49
               

               
Conread position:
               
26-233
               

               
Cow position:
               
chr16:5845436-5845648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
118, 17
               

               
Conread position:
               
26-233
               

               
Cow position:
               
chr16:23871886-23871672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 160
               

               
Conread position:
               
26-233
               

               
Cow position:
               
chr16:43152940-43152741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
26-234
               

               
Cow position:
               
chr16:38903669-38903468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
169, 50
               

               
Conread position:
               
26-236
               

               
Cow position:
               
chr16:4902367-4902565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
169, 53
               

               
Conread position:
               
26-236
               

               
Cow position:
               
chr16:32837781-32837571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
142, 69
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr16:11643122-11643327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
167, 100
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr16:42633983-42633772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
119, 58
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr16:46176274-46176062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
116, 45
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr16:53813894-53813674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
117, 197
               

               
Conread position:
               
26-238
               

               
Cow position:
               
chr16:18678962-18679179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
26-238
               

               
Cow position:
               
chr16:28922553-28922766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 54
               

               
Conread position:
               
26-239
               

               
Cow position:
               
chr16:3628582-3628792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
167, 20
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr16:7429143-7429359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
26-241
               

               
Cow position:
               
chr16:14441655-14441874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
26-241
               

               
Cow position:
               
chr16:39385166-39385394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
26-242
               

               
Cow position:
               
chr16:5363657-5363881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
26-243
               

               
Cow position:
               
chr16:15762399-15762172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
26-243
               

               
Cow position:
               
chr16:16177583-16177804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
169, 118
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr16:571152-570928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
77, 200
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr16:4134631-4134861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 226
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr16:5654273-5654497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 144
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr16:9790866-9790643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr16:26610398-26610626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr16:33299156-33299382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr16:35195846-35195626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 176
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr16:44744367-44744146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 57
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr16:53553952-53553732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 144
               

               
Conread position:
               
26-247
               

               
Cow position:
               
chr16:9845948-9845717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
26-247
               

               
Cow position:
               
chr16:51710363-51710143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
213, 166
               

               
Conread position:
               
26-250
               

               
Cow position:
               
chr16:53086560-53086346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
207, 65
               

               
Conread position:
               
26-252
               

               
Cow position:
               
chr16:21450613-21450837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
26-252
               

               
Cow position:
               
chr16:42970166-42969936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
76, 143
               

               
Conread position:
               
26-252
               

               
Cow position:
               
chr16:48006727-48006503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 141
               

               
Conread position:
               
26-252
               

               
Cow position:
               
chr16:53613063-53613300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
26-253
               

               
Cow position:
               
chr16:49126419-49126196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
169, 72
               

               
Conread position:
               
26-258
               

               
Cow position:
               
chr16:30209527-30209754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
127, 59
               

               
Conread position:
               
26-262
               

               
Cow position:
               
chr16:25287926-25287683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 200
               

               
Conread position:
               
26-264
               

               
Cow position:
               
chr16:26649869-26649619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
26-264
               

               
Cow position:
               
chr16:55308764-55308531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
202, 74
               

               
Conread position:
               
26-265
               

               
Cow position:
               
chr16:51113112-51112867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
26-267
               

               
Cow position:
               
chr16:4910766-4910512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
26-267
               

               
Cow position:
               
chr16:8959298-8959045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
26-267
               

               
Cow position:
               
chr16:51598838-51598599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
169, 74
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr16:4103392-4103148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 37
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr16:4192655-4192411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 155
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr16:5725240-5725481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
155, 17
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr16:10040073-10039830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr16:18354187-18353942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 157
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr16:18496403-18496156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 219
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr16:26500926-26501172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
168, 32
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr16:31978423-31978172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
79, 196
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr16:39279313-39279056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
99, 182
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr16:49125756-49125515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
169, 31
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr16:51399981-51399737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
98, 119
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr16:7010834-7011084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr16:13752359-13752117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr16:18141565-18141311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
122, 65
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr16:24702616-24702869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr16:25170155-25170408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
88, 104
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr16:37669964-37669722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
172, 40
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr16:45139434-45139686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr16:46552583-46552809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr16:48398481-48398239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:3246428-3246189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
126, 42
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:4372731-4372477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 87
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:7702296-7702543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 159
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:8448897-8448634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
62, 146
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:13579078-13578845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
169, 84
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:14754557-14754311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 198
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:15960530-15960274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:18426949-18427204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:20476301-20476551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
121, 102
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:22868410-22868162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 170
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:23058671-23058420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
74, 141
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:23737948-23738197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 68
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:24672595-24672341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:29158896-29159140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:30037229-30036971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:30143448-30143190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:32132293-32132529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
117, 54
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:35188019-35188269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:39165010-39165258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 64
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:39646324-39646561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 25
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:42242353-42242101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:46655047-46655300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:48385637-48385383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr16:52577225-52577474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
26-271
               

               
Cow position:
               
chr16:17142698-17142951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
26-271
               

               
Cow position:
               
chr16:38663947-38663693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
26-271
               

               
Cow position:
               
chr16:47245353-47245606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
118, 74
               

               
Conread position:
               
26-271
               

               
Cow position:
               
chr16:47920282-47920029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 207
               

               
Conread position:
               
26-277
               

               
Cow position:
               
chr16:37116839-37117098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
26-277
               

               
Cow position:
               
chr16:53048316-53048575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 144
               

               
Conread position:
               
27-148
               

               
Cow position:
               
chr16:11100031-11099910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
27-167
               

               
Cow position:
               
chr16:54227960-54227818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
27-169
               

               
Cow position:
               
chr16:8706785-8706639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
27-176
               

               
Cow position:
               
chr16:39695711-39695554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
27-178
               

               
Cow position:
               
chr16:3333192-3333340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
27-182
               

               
Cow position:
               
chr16:16231848-16232008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
27-192
               

               
Cow position:
               
chr16:15805746-15805915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
75, 92
               

               
Conread position:
               
27-200
               

               
Cow position:
               
chr16:44148-44325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
27-203
               

               
Cow position:
               
chr16:25484133-25484309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 95
               

               
Conread position:
               
27-204
               

               
Cow position:
               
chr16:37442362-37442180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
27-204
               

               
Cow position:
               
chr16:44138774-44138596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 23
               

               
Conread position:
               
27-211
               

               
Cow position:
               
chr16:590143-589964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
168, 73
               

               
Conread position:
               
27-212
               

               
Cow position:
               
chr16:29823160-29822971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
81, 172
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr16:37062628-37062428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
27-227
               

               
Cow position:
               
chr16:42257219-42257419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
27-237
               

               
Cow position:
               
chr16:16096503-16096715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
27-239
               

               
Cow position:
               
chr16:5896185-5896399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
27-243
               

               
Cow position:
               
chr16:24128467-24128690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
27-244
               

               
Cow position:
               
chr16:11153422-11153205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
141, 27
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr16:7075684-7075903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr16:43275788-43276010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
27-251
               

               
Cow position:
               
chr16:56522707-56522482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
120, 67
               

               
Conread position:
               
27-254
               

               
Cow position:
               
chr16:53892015-53891778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
27-264
               

               
Cow position:
               
chr16:8933654-8933415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
27-264
               

               
Cow position:
               
chr16:14106413-14106652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
171, 63
               

               
Conread position:
               
27-266
               

               
Cow position:
               
chr16:11619520-11619761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
117, 73
               

               
Conread position:
               
27-267
               

               
Cow position:
               
chr16:48095998-48095752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr16:26703150-26702900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr16:45703210-45702958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
62, 207
               

               
Conread position:
               
27-269
               

               
Cow position:
               
chr16:4144830-4145081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
27-269
               

               
Cow position:
               
chr16:7542055-7542304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr16:4911642-4911414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
122, 19
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr16:22804816-22804582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
201, 73
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr16:24228584-24228336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 203
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr16:27013666-27013912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr16:45047858-45047618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 63
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr16:48087105-48086852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
109, 185
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr16:49216197-49215976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
116, 68
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr16:53509224-53508968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr16:23033633-23033871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
28-161
               

               
Cow position:
               
chr16:13177166-13177303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
28-196
               

               
Cow position:
               
chr16:46521669-46521833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
119, 76
               

               
Conread position:
               
28-205
               

               
Cow position:
               
chr16:37924401-37924220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 106
               

               
Conread position:
               
28-220
               

               
Cow position:
               
chr16:5726693-5726884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
28-227
               

               
Cow position:
               
chr16:14799976-14799776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
135, 62
               

               
Conread position:
               
28-227
               

               
Cow position:
               
chr16:36930553-36930350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
28-230
               

               
Cow position:
               
chr16:7082968-7082761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
28-231
               

               
Cow position:
               
chr16:10857860-10857649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 158
               

               
Conread position:
               
28-237
               

               
Cow position:
               
chr16:4979580-4979778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
28-237
               

               
Cow position:
               
chr16:11425373-11425165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
71, 142
               

               
Conread position:
               
28-237
               

               
Cow position:
               
chr16:18719173-18718957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 158
               

               
Conread position:
               
28-248
               

               
Cow position:
               
chr16:39394343-39394561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
83, 162
               

               
Conread position:
               
28-251
               

               
Cow position:
               
chr16:37380038-37380258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 61
               

               
Conread position:
               
28-252
               

               
Cow position:
               
chr16:13195566-13195349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 73
               

               
Conread position:
               
28-258
               

               
Cow position:
               
chr16:15808738-15808980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
28-265
               

               
Cow position:
               
chr16:11621036-11620801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
116, 66
               

               
Conread position:
               
28-268
               

               
Cow position:
               
chr16:7077973-7077729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
119, 15
               

               
Conread position:
               
28-268
               

               
Cow position:
               
chr16:10148048-10148296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 61
               

               
Conread position:
               
28-269
               

               
Cow position:
               
chr16:7504866-7505104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
160, 65
               

               
Conread position:
               
28-269
               

               
Cow position:
               
chr16:42079075-42078832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 198
               

               
Conread position:
               
28-269
               

               
Cow position:
               
chr16:44676654-44676889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
165, 52
               

               
Conread position:
               
28-269
               

               
Cow position:
               
chr16:48340925-48340679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
158, 74
               

               
Conread position:
               
28-270
               

               
Cow position:
               
chr16:4499205-4499451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
140, 55
               

               
Conread position:
               
28-270
               

               
Cow position:
               
chr16:8315410-8315177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
217, 73
               

               
Conread position:
               
28-270
               

               
Cow position:
               
chr16:22842286-22842041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
117, 87
               

               
Conread position:
               
28-271
               

               
Cow position:
               
chr16:22786282-22786027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
29-189
               

               
Cow position:
               
chr16:2396095-2396260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr16:47017477-47017284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
87, 174
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr16:14360872-14361080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
29-241
               

               
Cow position:
               
chr16:42253806-42253582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
29-242
               

               
Cow position:
               
chr16:23730171-23729943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
29-267
               

               
Cow position:
               
chr16:11568345-11568105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
117, 60
               

               
Conread position:
               
29-269
               

               
Cow position:
               
chr16:17665400-17665648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
6, 201
               

               
Conread position:
               
29-269
               

               
Cow position:
               
chr16:33645782-33646030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
29-270
               

               
Cow position:
               
chr16:13611681-13611438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 21
               

               
Conread position:
               
29-270
               

               
Cow position:
               
chr16:48492951-48493196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
174, 64
               

               
Conread position:
               
29-270
               

               
Cow position:
               
chr16:53627655-53627412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 65
               

               
Conread position:
               
29-271
               

               
Cow position:
               
chr16:5477580-5477341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
162, 112
               

               
Conread position:
               
29-342
               

               
Cow position:
               
chr16:45261438-45261109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 285
               

               
Conread position:
               
30-233
               

               
Cow position:
               
chr16:15504757-15504546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 193
               

               
Conread position:
               
31-238
               

               
Cow position:
               
chr16:56127011-56126807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 133
               

               
Conread position:
               
34-129
               

               
Cow position:
               
chr16:12106437-12106532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
34-213
               

               
Cow position:
               
chr16:28112148-28111965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
34-230
               

               
Cow position:
               
chr16:11105321-11105526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
34-234
               

               
Cow position:
               
chr16:41590552-41590748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
111, 66
               

               
Conread position:
               
34-236
               

               
Cow position:
               
chr16:53225032-53224840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 85
               

               
Conread position:
               
34-239
               

               
Cow position:
               
chr16:32781135-32781348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
34-263
               

               
Cow position:
               
chr16:16424831-16424601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
82, 210
               

               
Conread position:
               
34-266
               

               
Cow position:
               
chr16:43851053-43850820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
137, 66
               

               
Conread position:
               
34-269
               

               
Cow position:
               
chr16:41752800-41752559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
34-270
               

               
Cow position:
               
chr16:27249182-27249420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 158
               

               
Conread position:
               
34-270
               

               
Cow position:
               
chr16:49336000-49336244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
34-270
               

               
Cow position:
               
chr16:50288930-50289168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
34-271
               

               
Cow position:
               
chr16:16402554-16402306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 202
               

               
Conread position:
               
35-223
               

               
Cow position:
               
chr16:23823245-23823052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
108, 188
               

               
Conread position:
               
35-264
               

               
Cow position:
               
chr16:56912947-56912704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
35-270
               

               
Cow position:
               
chr16:43105739-43105499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
112, 174
               

               
Conread position:
               
36-192
               

               
Cow position:
               
chr16:23673936-23674092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 112
               

               
Conread position:
               
36-216
               

               
Cow position:
               
chr16:5352056-5351876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
159, 30
               

               
Conread position:
               
36-226
               

               
Cow position:
               
chr16:30939508-30939702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
36-236
               

               
Cow position:
               
chr16:4277939-4277742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 144
               

               
Conread position:
               
36-237
               

               
Cow position:
               
chr16:23483063-23483272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
36-240
               

               
Cow position:
               
chr16:31122475-31122273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
36-245
               

               
Cow position:
               
chr16:31159803-31159584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
36-245
               

               
Cow position:
               
chr16:31419219-31419435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
128, 94
               

               
Conread position:
               
36-258
               

               
Cow position:
               
chr16:20634103-20633873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
36-258
               

               
Cow position:
               
chr16:33791069-33790831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 123
               

               
Conread position:
               
36-267
               

               
Cow position:
               
chr16:30515813-30515576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
36-268
               

               
Cow position:
               
chr16:8026070-8025841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
36-268
               

               
Cow position:
               
chr16:43537512-43537754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 201
               

               
Conread position:
               
36-269
               

               
Cow position:
               
chr16:16548386-16548628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 85
               

               
Conread position:
               
36-269
               

               
Cow position:
               
chr16:43308794-43308546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
60, 242
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr16:12361198-12360959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr16:18758069-18757823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
55, 132
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr16:42217915-42217674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
64, 180
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr16:48370173-48369933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr16:51869413-51869655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
57, 186
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr16:53428027-53428273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr16:53595748-53595507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
37-252
               

               
Cow position:
               
chr16:53830814-53830593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 204
               

               
Conread position:
               
37-270
               

               
Cow position:
               
chr16:8323210-8322966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
38-225
               

               
Cow position:
               
chr16:28267239-28267046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
38-270
               

               
Cow position:
               
chr16:30705884-30706123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 8
               

               
Conread position:
               
38-270
               

               
Cow position:
               
chr16:39417340-39417104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
156, 186
               

               
Conread position:
               
39-216
               

               
Cow position:
               
chr16:28694519-28694694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
39-269
               

               
Cow position:
               
chr16:46434341-46434101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 136
               

               
Conread position:
               
39-269
               

               
Cow position:
               
chr16:48191223-48190994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
159, 191
               

               
Conread position:
               
40-270
               

               
Cow position:
               
chr16:11957803-11957562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
41-216
               

               
Cow position:
               
chr16:21095711-21095530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
41-236
               

               
Cow position:
               
chr16:26156355-26156157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
155, 96
               

               
Conread position:
               
41-277
               

               
Cow position:
               
chr16:56787997-56787753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
42-182
               

               
Cow position:
               
chr16:8481310-8481166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
42-203
               

               
Cow position:
               
chr16:13713133-13712971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 152
               

               
Conread position:
               
42-231
               

               
Cow position:
               
chr16:8840673-8840866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
72, 180
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr16:22772749-22772955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 145
               

               
Conread position:
               
42-243
               

               
Cow position:
               
chr16:52636601-52636398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
61, 134
               

               
Conread position:
               
42-268
               

               
Cow position:
               
chr16:35757994-35758216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
203, 27
               

               
Conread position:
               
42-269
               

               
Cow position:
               
chr16:7917581-7917819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
42-269
               

               
Cow position:
               
chr16:32302206-32301992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
111, 48
               

               
Conread position:
               
42-270
               

               
Cow position:
               
chr16:42443935-42444172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
42-270
               

               
Cow position:
               
chr16:52855239-52855016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
42-307
               

               
Cow position:
               
chr16:25463554-25463829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 240
               

               
Conread position:
               
43-262
               

               
Cow position:
               
chr16:54679449-54679677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 169
               

               
Conread position:
               
43-268
               

               
Cow position:
               
chr16:4503062-4503296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
43-270
               

               
Cow position:
               
chr16:54673019-54673253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr16:45677069-45676875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
151, 182
               

               
Conread position:
               
44-251
               

               
Cow position:
               
chr16:47116453-47116656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
44-270
               

               
Cow position:
               
chr16:13233162-13232933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
151, 69
               

               
Conread position:
               
44-270
               

               
Cow position:
               
chr16:13973498-13973270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
44-270
               

               
Cow position:
               
chr16:28692927-28692707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
104, 31
               

               
Conread position:
               
44-270
               

               
Cow position:
               
chr16:43801126-43800901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
45-212
               

               
Cow position:
               
chr16:31117836-31117661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
45-216
               

               
Cow position:
               
chr16:3752358-3752537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
45-241
               

               
Cow position:
               
chr16:33482222-33482425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
100, 117
               

               
Conread position:
               
45-269
               

               
Cow position:
               
chr16:45731591-45731372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
150, 70
               

               
Conread position:
               
45-272
               

               
Cow position:
               
chr16:31074179-31074413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 167
               

               
Conread position:
               
46-225
               

               
Cow position:
               
chr16:27262160-27261988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 43
               

               
Conread position:
               
46-235
               

               
Cow position:
               
chr16:17606079-17606264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
46-269
               

               
Cow position:
               
chr16:16236343-16236116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
99, 116
               

               
Conread position:
               
47-269
               

               
Cow position:
               
chr16:10592226-10592448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
47-270
               

               
Cow position:
               
chr16:14758516-14758754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chr16:50688308-50688535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
49-227
               

               
Cow position:
               
chr16:8069030-8068853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
49-269
               

               
Cow position:
               
chr16:12060201-12060431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
49-269
               

               
Cow position:
               
chr16:22860971-22860754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
197, 67
               

               
Conread position:
               
50-268
               

               
Cow position:
               
chr16:26846023-26846225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
51-270
               

               
Cow position:
               
chr16:8066091-8065872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
51-270
               

               
Cow position:
               
chr16:12633683-12633900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
52-238
               

               
Cow position:
               
chr16:9615444-9615254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
52-267
               

               
Cow position:
               
chr16:14124947-14125151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 47
               

               
Conread position:
               
52-270
               

               
Cow position:
               
chr16:41530500-41530284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
97, 173
               
UCSC Genome Browser

               
Conread position:
               
53-269
               

               
Cow position:
               
chr16:4981588-4981362 (view  custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
135, 11
               
UCSC Genome Browser

               
               
               
Conread position:
55-241

               
               
               
Cow position:
chr16:52227303-52227110 (view  custom track)

               
               
               
Alignm length:
194

               
               
               
Alignm identity:
137

               
               
               
Alignm E-value:
6e-23

               
               
               
Alignm gaps (pig, cow):
59, 0
UCSC Genome Browser

               
               
               
Conread position:
55-260

               
               
               
Cow position:
chr16:10462723-10462518 (view  custom track)

               
               
               
Alignm length:
209

               
               
               
Alignm identity:
161

               
               
               
Alignm E-value:
1e-39

               
               
               
Alignm gaps (pig, cow):
190, 73

               
               
               Conread position:56-235
               
               
               Cow position:chr16:15867934-15867752 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:58-245
               
               
               Cow position:chr16:7928389-7928576 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):86, 128

               
               
               Conread position:58-266
               
               
               Cow position:chr16:17982347-17982133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):42, 17

               
               
               Conread position:59-242
               
               
               Cow position:chr16:13330138-13329951 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:133
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):43, 161

               
               
               Conread position:59-269
               
               
               Cow position:chr16:42752658-42752865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:171
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):85, 59

               
               
               Conread position:59-272
               
               
               Cow position:chr16:54243883-54244102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):86, 159

               
               
               Conread position:60-269
               
               
               Cow position:chr16:55784963-55784743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):40, 0

               
               
               Conread position:60-277
               
               
               Cow position:chr16:49404356-49404136 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):43, 132

               
               
               Conread position:61-269
               
               
               Cow position:chr16:45554238-45554456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:156
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):73, 163

               
               
               Conread position:61-270
               
               
               Cow position:chr16:39237743-39237962 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:172
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):42, 103

               
               
               Conread position:61-270
               
               
               Cow position:chr16:52275330-52275113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:168
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):134, 0

               
               
               Conread position:62-192
               
               
               Cow position:chr16:54598061-54598189 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:99
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:62-215
               
               
               Cow position:chr16:9787361-9787523 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:62-269
               
               
               Cow position:chr16:17626731-17626944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:165
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:62-270
               
               
               Cow position:chr16:14685588-14685377 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:169
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):133, 175

               
               
               Conread position:65-222
               
               
               Cow position:chr16:24637529-24637368 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:127
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):77, 11

               
               
               Conread position:67-270
               
               
               Cow position:chr16:6344633-6344424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:155
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):35, 84

               
               
               Conread position:68-269
               
               
               Cow position:chr16:24855347-24855558 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:149
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):48, 0

               
               
               Conread position:69-227
               
               
               Cow position:chr16:3821341-3821507 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:128
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):34, 157

               
               
               Conread position:69-241
               
               
               Cow position:chr16:20205260-20205445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):30, 0

               
               
               Conread position:69-259
               
               
               Cow position:chr16:22808743-22808556 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):126, 37

               
               
               Conread position:69-260
               
               
               Cow position:chr16:46628028-46627829 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:149
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):24, 77

               
               
               Conread position:70-234
               
               
               Cow position:chr16:41689516-41689672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:126
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):90, 33

               
               
               Conread position:70-270
               
               
               Cow position:chr16:42200699-42200915 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:70-270
               
               
               Cow position:chr16:54083843-54084052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:71-227
               
               
               Cow position:chr16:50014334-50014497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:120
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:71-270
               
               
               Cow position:chr16:33229883-33230092 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:150
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:72-225
               
               
               Cow position:chr16:7600055-7600219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:122
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:72-233
               
               
               Cow position:chr16:49252942-49252780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:120
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):77, 27

               
               
               Conread position:74-269
               
               
               Cow position:chr16:21369293-21369503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:76-267
               
               
               Cow position:chr16:17288756-17288960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:152
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):104, 0

               
               
               Conread position:77-269
               
               
               Cow position:chr16:38119633-38119435 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):26, 92

               
               
               Conread position:78-269
               
               
               Cow position:chr16:17282484-17282678 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:139
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):158, 46

               
               
               Conread position:78-270
               
               
               Cow position:chr16:8076691-8076486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:79-269
               
               
               Cow position:chr16:53037805-53037618 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:137
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):114, 145

               
               
               Conread position:83-270
               
               
               Cow position:chr16:7549790-7549984 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):110, 89

               
               
               Conread position:85-242
               
               
               Cow position:chr16:34153750-34153585 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:128
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):58, 158

               
               
               Conread position:89-270
               
               
               Cow position:chr16:42072899-42072717 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):61, 16

               
               
               Conread position:89-270
               
               
               Cow position:chr16:47854770-47854956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:90-245
               
               
               Cow position:chr16:52133686-52133529 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):62, 135

               
               
               Conread position:90-269
               
               
               Cow position:chr16:7418213-7418394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:133
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):71, 138

               
               
               Conread position:90-270
               
               
               Cow position:chr16:7442273-7442082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:139
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:90-270
               
               
               Cow position:chr16:31348938-31348748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:148
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):106, 0

               
               
               Conread position:94-231
               
               
               Cow position:chr16:30045749-30045892 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:111
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:94-268
               
               
               Cow position:chr16:14974699-14974526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):82, 58

               
               
               Conread position:95-230
               
               
               Cow position:chr16:7034151-7034284 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:102
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:95-236
               
               
               Cow position:chr16:42734179-42734037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:119
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):100, 47

               
               
               Conread position:95-237
               
               
               Cow position:chr16:10651056-10650912 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):100, 0

               
               
               Conread position:95-245
               
               
               Cow position:chr16:50521312-50521465 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:123
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):100, 0

               
               
               Conread position:96-260
               
               
               Cow position:chr16:35296908-35297075 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):57, 89

               
               
               Conread position:97-268
               
               
               Cow position:chr16:38243826-38243647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:98-237
               
               
               Cow position:chr16:27723053-27723189 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:112
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):95, 15

               
               
               Conread position:98-237
               
               
               Cow position:chr16:33357839-33357700 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:102
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:98-266
               
               
               Cow position:chr16:9136013-9136193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:98-269
               
               
               Cow position:chr16:25380659-25380481 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):46, 130

               
               
               Conread position:101-252
               
               
               Cow position:chr16:17945362-17945511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:115
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):94, 50

               
               
               Conread position:101-269
               
               
               Cow position:chr16:22380515-22380340 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:129
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:102-268
               
               
               Cow position:chr16:12273909-12274084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:103-271
               
               
               Cow position:chr16:29712262-29712436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:130
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):40, 0

               
               
               Conread position:104-270
               
               
               Cow position:chr16:16280601-16280432 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:132
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):44, 12

               
               
               Conread position:106-270
               
               
               Cow position:chr16:6319043-6319218 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:107-270
               
               
               Cow position:chr16:7583246-7583413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:126
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):46, 19

               
               
               Conread position:118-270
               
               
               Cow position:chr16:10772990-10773146 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:127
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):77, 113

               
               
               Conread position:118-270
               
               
               Cow position:chr16:56565453-56565611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):39, 120

               
               
               Conread position:119-227
               
               
               Cow position:chr16:12106740-12106850 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:111
               
               
               Alignm identity:92
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):76, 0

               
               
               Conread position:122-270
               
               
               Cow position:chr16:50934009-50933867 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):73, 92

               
               
               Conread position:123-270
               
               
               Cow position:chr16:14699781-14699937 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:128-270
               
               
               Cow position:chr16:36121113-36120967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:114
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):21, 108

               
               
               Conread position:129-268
               
               
               Cow position:chr16:26068800-26068946 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:113
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:130-266
               
               
               Cow position:chr16:21317725-21317581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:117
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):100, 12

               
               
               Conread position:143-269
               
               
               Cow position:chr16:56796784-56796651 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:107
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:540-766
               
               
               Cow position:chr16:26516504-26516279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:154
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):165, 70
Show alignments to all cow chromosomes.