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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010098A10.5
        

               
Conread position:
               
1-148
               

               
Cow position:
               
chr9:54177959-54178110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr9:9753110-9753377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr9:47263931-47264170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr9:33598267-33598000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr9:3169235-3169466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr9:11313224-11313496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
5, 54
               

               
Conread position:
               
8-214
               

               
Cow position:
               
chr9:43207098-43207306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
8-226
               

               
Cow position:
               
chr9:52001287-52001066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr9:28983461-28983223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
8-268
               

               
Cow position:
               
chr9:38344175-38343903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
8-270
               

               
Cow position:
               
chr9:8724077-8723807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
8-273
               

               
Cow position:
               
chr9:26434786-26435043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
145, 27
               

               
Conread position:
               
11-261
               

               
Cow position:
               
chr9:27697451-27697701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
138, 115
               

               
Conread position:
               
14-236
               

               
Cow position:
               
chr9:41995989-41995761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
14-269
               

               
Cow position:
               
chr9:34918991-34919245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
181, 21
               

               
Conread position:
               
16-236
               

               
Cow position:
               
chr9:10678477-10678257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
128, 84
               

               
Conread position:
               
16-239
               

               
Cow position:
               
chr9:3782638-3782409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 199
               

               
Conread position:
               
17-161
               

               
Cow position:
               
chr9:42956633-42956486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr9:37141499-37141315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
19-198
               

               
Cow position:
               
chr9:38385599-38385783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
19-270
               

               
Cow position:
               
chr9:25972769-25972516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
20-237
               

               
Cow position:
               
chr9:11870476-11870265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
154, 110
               

               
Conread position:
               
20-269
               

               
Cow position:
               
chr9:34901845-34902093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
21-227
               

               
Cow position:
               
chr9:2113735-2113944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 177
               

               
Conread position:
               
21-237
               

               
Cow position:
               
chr9:26555937-26556153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
150, 86
               

               
Conread position:
               
21-243
               

               
Cow position:
               
chr9:49983423-49983643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
177, 94
               

               
Conread position:
               
21-269
               

               
Cow position:
               
chr9:9595685-9595935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 202
               

               
Conread position:
               
21-269
               

               
Cow position:
               
chr9:44831786-44832040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
94, 79
               

               
Conread position:
               
21-270
               

               
Cow position:
               
chr9:6225183-6225441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
21-270
               

               
Cow position:
               
chr9:16300302-16300555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
21-270
               

               
Cow position:
               
chr9:38846080-38846323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
78, 127
               

               
Conread position:
               
22-216
               

               
Cow position:
               
chr9:8563108-8562909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
22-232
               

               
Cow position:
               
chr9:51891763-51891543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
22-262
               

               
Cow position:
               
chr9:31626416-31626170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
22-268
               

               
Cow position:
               
chr9:54610963-54611220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
80, 165
               

               
Conread position:
               
22-269
               

               
Cow position:
               
chr9:10011068-10010825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
121, 78
               

               
Conread position:
               
22-271
               

               
Cow position:
               
chr9:35904483-35904732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 102
               

               
Conread position:
               
24-134
               

               
Cow position:
               
chr9:26477825-26477715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
24-142
               

               
Cow position:
               
chr9:49689202-49689084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-155
               

               
Cow position:
               
chr9:51557096-51557231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-166
               

               
Cow position:
               
chr9:40060061-40060207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
24-170
               

               
Cow position:
               
chr9:29338767-29338918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
24-192
               

               
Cow position:
               
chr9:58647308-58647140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
24-199
               

               
Cow position:
               
chr9:5161801-5161974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
24-204
               

               
Cow position:
               
chr9:25502272-25502460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
24-212
               

               
Cow position:
               
chr9:3594260-3594454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 130
               

               
Conread position:
               
24-215
               

               
Cow position:
               
chr9:8612553-8612354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
24-223
               

               
Cow position:
               
chr9:22227820-22228018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
171, 80
               

               
Conread position:
               
24-227
               

               
Cow position:
               
chr9:50295757-50295966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
24-232
               

               
Cow position:
               
chr9:32732420-32732633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
24-237
               

               
Cow position:
               
chr9:58853781-58853563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
68, 113
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr9:64559621-64559841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
129, 96
               

               
Conread position:
               
24-252
               

               
Cow position:
               
chr9:52787271-52787508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
24-264
               

               
Cow position:
               
chr9:41283292-41283035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
24-266
               

               
Cow position:
               
chr9:26391034-26390787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
24-266
               

               
Cow position:
               
chr9:55890075-55889829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
76, 165
               

               
Conread position:
               
24-267
               

               
Cow position:
               
chr9:16086526-16086273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr9:5594765-5594519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr9:8534417-8534674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr9:34000349-34000604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 220
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr9:7634532-7634286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
176, 19
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr9:15950890-15951142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
62, 131
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr9:17740678-17740927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
76, 180
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr9:50606688-50606933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
174, 19
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr9:1751600-1751352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 137
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr9:4128518-4128767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
164, 195
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr9:5836428-5836168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr9:8288883-8288629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr9:9823254-9823492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
169, 59
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr9:17310296-17310551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
120, 60
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr9:19714335-19714094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
125, 63
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr9:23541152-23541382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
169, 63
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr9:29808730-29808467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
69, 78
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr9:39681622-39681353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 42
               

               
Conread position:
               
24-270
               

               
Cow position:
               
chr9:54528780-54528526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
24-273
               

               
Cow position:
               
chr9:54924891-54924629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
24-273
               

               
Cow position:
               
chr9:63905338-63905596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 202
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr9:1520465-1520725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
25-147
               

               
Cow position:
               
chr9:14298899-14298773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
25-147
               

               
Cow position:
               
chr9:36354017-36354135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
25-148
               

               
Cow position:
               
chr9:54666170-54666045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
25-157
               

               
Cow position:
               
chr9:51928968-51928830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
25-161
               

               
Cow position:
               
chr9:25969610-25969471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
25-161
               

               
Cow position:
               
chr9:34400304-34400163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
25-161
               

               
Cow position:
               
chr9:49544796-49544929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
132, 37
               

               
Conread position:
               
25-176
               

               
Cow position:
               
chr9:6952355-6952203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
25-177
               

               
Cow position:
               
chr9:17568403-17568254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
143, 96
               

               
Conread position:
               
25-177
               

               
Cow position:
               
chr9:58131459-58131615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
25-179
               

               
Cow position:
               
chr9:18140030-18140186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
25-186
               

               
Cow position:
               
chr9:9624763-9624927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
25-188
               

               
Cow position:
               
chr9:26310823-26310656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
25-193
               

               
Cow position:
               
chr9:35101132-35100964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-194
               

               
Cow position:
               
chr9:62357266-62357433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
25-197
               

               
Cow position:
               
chr9:56453597-56453421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
25-202
               

               
Cow position:
               
chr9:2398367-2398540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
25-207
               

               
Cow position:
               
chr9:17785196-17785381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
119, 90
               

               
Conread position:
               
25-208
               

               
Cow position:
               
chr9:15982814-15983005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
25-212
               

               
Cow position:
               
chr9:3807472-3807665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
74, 159
               

               
Conread position:
               
25-215
               

               
Cow position:
               
chr9:14974661-14974858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
69, 110
               

               
Conread position:
               
25-216
               

               
Cow position:
               
chr9:26577595-26577783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
124, 72
               

               
Conread position:
               
25-217
               

               
Cow position:
               
chr9:21840339-21840148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
25-219
               

               
Cow position:
               
chr9:53608129-53608326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
25-220
               

               
Cow position:
               
chr9:10118399-10118597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
25-221
               

               
Cow position:
               
chr9:41412047-41412245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
25-222
               

               
Cow position:
               
chr9:20839879-20839682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
173, 96
               

               
Conread position:
               
25-224
               

               
Cow position:
               
chr9:8099557-8099758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
166, 112
               

               
Conread position:
               
25-225
               

               
Cow position:
               
chr9:31587832-31588037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
25-227
               

               
Cow position:
               
chr9:2034436-2034235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
78, 142
               

               
Conread position:
               
25-227
               

               
Cow position:
               
chr9:18093399-18093607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
139, 55
               

               
Conread position:
               
25-227
               

               
Cow position:
               
chr9:19382587-19382389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
25-227
               

               
Cow position:
               
chr9:36623187-36623383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
25-229
               

               
Cow position:
               
chr9:8868872-8869082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
25-229
               

               
Cow position:
               
chr9:40542379-40542179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
25-232
               

               
Cow position:
               
chr9:5319894-5319689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 153
               

               
Conread position:
               
25-232
               

               
Cow position:
               
chr9:17806258-17806051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
25-232
               

               
Cow position:
               
chr9:19542174-19541962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
100, 90
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr9:9200460-9200668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
143, 178
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr9:9957085-9956879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
146, 85
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr9:42172934-42173145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 58
               

               
Conread position:
               
25-235
               

               
Cow position:
               
chr9:13670901-13670694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
75, 160
               

               
Conread position:
               
25-235
               

               
Cow position:
               
chr9:26086332-26086116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
25-235
               

               
Cow position:
               
chr9:44108565-44108778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
54, 111
               

               
Conread position:
               
25-236
               

               
Cow position:
               
chr9:8599868-8599655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 71
               

               
Conread position:
               
25-236
               

               
Cow position:
               
chr9:34762585-34762795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 127
               

               
Conread position:
               
25-236
               

               
Cow position:
               
chr9:43912194-43911980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 117
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr9:5029780-5029564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
119, 209
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr9:7410047-7409826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr9:11192903-11193121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr9:41653054-41652836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
78, 198
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr9:43037748-43037536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 168
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr9:59013070-59013281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
165, 64
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr9:61846885-61847102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
25-239
               

               
Cow position:
               
chr9:8546583-8546372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
168, 138
               

               
Conread position:
               
25-239
               

               
Cow position:
               
chr9:34310299-34310076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 212
               

               
Conread position:
               
25-240
               

               
Cow position:
               
chr9:12356121-12355907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
119, 182
               

               
Conread position:
               
25-240
               

               
Cow position:
               
chr9:23430877-23431097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
25-240
               

               
Cow position:
               
chr9:27052068-27052287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 129
               

               
Conread position:
               
25-240
               

               
Cow position:
               
chr9:64091953-64091732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 198
               

               
Conread position:
               
25-244
               

               
Cow position:
               
chr9:16218378-16218606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 164
               

               
Conread position:
               
25-245
               

               
Cow position:
               
chr9:5621765-5621996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
25-245
               

               
Cow position:
               
chr9:26057183-26057400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
25-245
               

               
Cow position:
               
chr9:37528721-37528493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
72, 141
               

               
Conread position:
               
25-245
               

               
Cow position:
               
chr9:50080781-50080998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 199
               

               
Conread position:
               
25-252
               

               
Cow position:
               
chr9:15805657-15805883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
25-252
               

               
Cow position:
               
chr9:34689347-34689559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
25-253
               

               
Cow position:
               
chr9:42998206-42998432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 46
               

               
Conread position:
               
25-258
               

               
Cow position:
               
chr9:26828556-26828798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 170
               

               
Conread position:
               
25-258
               

               
Cow position:
               
chr9:61022875-61022637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
25-262
               

               
Cow position:
               
chr9:35305855-35306096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
125, 76
               

               
Conread position:
               
25-265
               

               
Cow position:
               
chr9:30138390-30138153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
170, 18
               

               
Conread position:
               
25-266
               

               
Cow position:
               
chr9:18002684-18002936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
25-267
               

               
Cow position:
               
chr9:1950184-1949938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
25-267
               

               
Cow position:
               
chr9:34468328-34468561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
221, 33
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr9:21459892-21460138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
63, 124
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr9:27076986-27077226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 78
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr9:30749320-30749573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
130, 223
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr9:36999796-37000045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 139
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr9:55287626-55287876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
36, 168
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr9:57951064-57951305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
124, 69
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr9:5763365-5763618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
78, 158
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr9:6089362-6089103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
119, 64
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr9:15215416-15215672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
89, 133
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr9:16745942-16745687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 37
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr9:20091303-20091062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
198, 25
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr9:20989189-20989435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 187
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr9:29006825-29006572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
170, 58
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr9:29841152-29840908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
91, 76
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr9:34287059-34286814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
169, 50
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr9:49764921-49764672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr9:56773344-56773096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:3070158-3070401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
127, 85
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:4858799-4858550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 49
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:9402920-9403160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
163, 51
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:9443333-9443590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
118, 19
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:9552352-9552104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
170, 119
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:9723618-9723865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:18252658-18252906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
77, 108
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:19637373-19637619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 139
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:20321851-20322086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:20738967-20738710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
121, 88
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:21888434-21888182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:22114368-22114622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:22318603-22318364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
170, 75
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:23043040-23042788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:23527532-23527776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
182, 41
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:30402155-30402411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
91, 66
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:32371495-32371743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 192
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:33218687-33218940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:33388643-33388886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:37017149-37016905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
119, 152
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:41513884-41513638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 88
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:41789543-41789298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 30
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:41958530-41958772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
66, 180
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:42498094-42497842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 230
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:48118437-48118676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
119, 61
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:52407435-52407178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:54997758-54998015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:55118343-55118096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
195, 37
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:56011763-56011513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
25, 174
               

               
Conread position:
               
25-270
               

               
Cow position:
               
chr9:61997331-61997584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr9:5501116-5500866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
170, 84
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr9:17929037-17928770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr9:18381124-18380875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
122, 139
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr9:20961023-20961267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
121, 68
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr9:28726461-28726711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
168, 27
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr9:32238648-32238394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr9:32625261-32625020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
168, 11
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr9:38692273-38692522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
84, 142
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr9:56861283-56861016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
25-274
               

               
Cow position:
               
chr9:64637810-64637558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
94, 119
               

               
Conread position:
               
25-277
               

               
Cow position:
               
chr9:10877601-10877858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
91, 246
               

               
Conread position:
               
25-299
               

               
Cow position:
               
chr9:38193265-38192993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
163, 75
               

               
Conread position:
               
25-342
               

               
Cow position:
               
chr9:10092129-10092450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
26-150
               

               
Cow position:
               
chr9:5340897-5340773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-157
               

               
Cow position:
               
chr9:19266900-19267031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-159
               

               
Cow position:
               
chr9:32787843-32787979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
26-160
               

               
Cow position:
               
chr9:34355662-34355800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
26-170
               

               
Cow position:
               
chr9:20465449-20465597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
26-178
               

               
Cow position:
               
chr9:2977646-2977487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
26-184
               

               
Cow position:
               
chr9:47926171-47926018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
26-193
               

               
Cow position:
               
chr9:47472960-47472787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
26-200
               

               
Cow position:
               
chr9:11155770-11155601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
158, 102
               

               
Conread position:
               
26-201
               

               
Cow position:
               
chr9:5268820-5268638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
26-208
               

               
Cow position:
               
chr9:13994452-13994264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
26-211
               

               
Cow position:
               
chr9:7866329-7866139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
26-212
               

               
Cow position:
               
chr9:31777427-31777614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 109
               

               
Conread position:
               
26-213
               

               
Cow position:
               
chr9:20681143-20681331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
26-215
               

               
Cow position:
               
chr9:30020243-30020041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
73, 157
               

               
Conread position:
               
26-216
               

               
Cow position:
               
chr9:18072853-18073041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
163, 94
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chr9:42585362-42585563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chr9:58674005-58673806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr9:24726414-24726611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
126, 83
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr9:52505039-52505244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
26-224
               

               
Cow position:
               
chr9:25964560-25964767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
26-225
               

               
Cow position:
               
chr9:37069305-37069507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
26-226
               

               
Cow position:
               
chr9:36445886-36445690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
169, 40
               

               
Conread position:
               
26-226
               

               
Cow position:
               
chr9:43814704-43814506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 36
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr9:3932232-3932022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr9:5393315-5393109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
76, 128
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr9:31077414-31077619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 140
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr9:34093161-34093374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr9:49982833-49983037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
73, 144
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr9:58669644-58669435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr9:60037920-60037714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
26-230
               

               
Cow position:
               
chr9:30664514-30664726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
26-232
               

               
Cow position:
               
chr9:3724797-3725007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
26-233
               

               
Cow position:
               
chr9:44914831-44915033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
26-234
               

               
Cow position:
               
chr9:9491057-9490845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
26-235
               

               
Cow position:
               
chr9:58439517-58439727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
77, 106
               

               
Conread position:
               
26-236
               

               
Cow position:
               
chr9:1952005-1952217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
26-236
               

               
Cow position:
               
chr9:22361278-22361066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
26-236
               

               
Cow position:
               
chr9:41416615-41416403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
121, 82
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr9:8998619-8998407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr9:17634567-17634783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 160
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr9:18110601-18110816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
26-238
               

               
Cow position:
               
chr9:8997820-8997599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 200
               

               
Conread position:
               
26-238
               

               
Cow position:
               
chr9:21030580-21030357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 215
               

               
Conread position:
               
26-238
               

               
Cow position:
               
chr9:36602155-36602369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr9:9461391-9461608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr9:36067170-36066955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr9:41317703-41317922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
135, 214
               

               
Conread position:
               
26-242
               

               
Cow position:
               
chr9:23388415-23388630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
172, 17
               

               
Conread position:
               
26-242
               

               
Cow position:
               
chr9:41782159-41781942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
172, 83
               

               
Conread position:
               
26-242
               

               
Cow position:
               
chr9:52484653-52484872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
126, 164
               

               
Conread position:
               
26-243
               

               
Cow position:
               
chr9:1984257-1984480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
108, 46
               

               
Conread position:
               
26-243
               

               
Cow position:
               
chr9:34666673-34666464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
169, 49
               

               
Conread position:
               
26-243
               

               
Cow position:
               
chr9:36410088-36410314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
26-243
               

               
Cow position:
               
chr9:49404017-49403803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr9:5246113-5245905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr9:64516832-64517057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
26-247
               

               
Cow position:
               
chr9:37098969-37099194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 81
               

               
Conread position:
               
26-249
               

               
Cow position:
               
chr9:56253164-56252937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
26-253
               

               
Cow position:
               
chr9:44467085-44467316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
26-255
               

               
Cow position:
               
chr9:5226900-5227144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
26-257
               

               
Cow position:
               
chr9:11068205-11068444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 140
               

               
Conread position:
               
26-258
               

               
Cow position:
               
chr9:60110497-60110275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
122, 65
               

               
Conread position:
               
26-259
               

               
Cow position:
               
chr9:11830273-11830037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 114
               

               
Conread position:
               
26-261
               

               
Cow position:
               
chr9:6880034-6879793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
73, 142
               

               
Conread position:
               
26-265
               

               
Cow position:
               
chr9:38961174-38961416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
111, 74
               

               
Conread position:
               
26-265
               

               
Cow position:
               
chr9:54681766-54681526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 89
               

               
Conread position:
               
26-266
               

               
Cow position:
               
chr9:3387954-3387707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
26-266
               

               
Cow position:
               
chr9:25958678-25958441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
202, 36
               

               
Conread position:
               
26-267
               

               
Cow position:
               
chr9:41679999-41679764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 50
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr9:5532217-5531961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr9:6933808-6934058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr9:8951167-8950920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr9:9516506-9516749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
193, 102
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr9:11299433-11299674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr9:28747258-28747504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr9:33093208-33092968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr9:45756621-45756379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr9:51566223-51566479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
120, 24
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr9:52578269-52578522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 150
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr9:3959318-3959081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
165, 67
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr9:5509988-5509739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 192
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr9:9416143-9416381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
118, 68
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr9:13205306-13205557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
180, 43
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr9:17871843-17872095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
121, 94
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr9:26278909-26279154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 126
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr9:28773381-28773136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
164, 75
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr9:36827389-36827150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
204, 61
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr9:51620700-51620457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
98, 112
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr9:63746068-63745825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr9:64050291-64050546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
39, 188
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:5756739-5756974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
144, 124
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:8937412-8937166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 149
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:10666760-10667012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
76, 130
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:20900866-20901108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:22151823-22152072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
169, 86
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:22443347-22443613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:24997252-24997505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:26404053-26403799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:29108801-29108550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
145, 43
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:29184869-29185123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 137
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:34697031-34697288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
77, 204
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:35167432-35167190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
117, 67
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:35850163-35849918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 169
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:43871236-43870989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
116, 54
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:44710086-44709839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:47869271-47869023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 128
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:54437517-54437278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
169, 31
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:55074871-55075118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
117, 72
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr9:55084033-55084290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 131
               

               
Conread position:
               
26-271
               

               
Cow position:
               
chr9:35533687-35533940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 89
               

               
Conread position:
               
26-271
               

               
Cow position:
               
chr9:47906025-47906268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
120, 54
               

               
Conread position:
               
26-277
               

               
Cow position:
               
chr9:53602677-53602434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
219, 87
               

               
Conread position:
               
26-296
               

               
Cow position:
               
chr9:40105741-40105455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 203
               

               
Conread position:
               
27-143
               

               
Cow position:
               
chr9:36844095-36843982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
27-161
               

               
Cow position:
               
chr9:20237744-20237881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 28
               

               
Conread position:
               
27-167
               

               
Cow position:
               
chr9:44416978-44417117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
136, 28
               

               
Conread position:
               
27-192
               

               
Cow position:
               
chr9:33100877-33101045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
27-194
               

               
Cow position:
               
chr9:1350183-1350351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
27-194
               

               
Cow position:
               
chr9:18008604-18008769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 69
               

               
Conread position:
               
27-194
               

               
Cow position:
               
chr9:22616886-22616720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
27-197
               

               
Cow position:
               
chr9:53257797-53257967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 77
               

               
Conread position:
               
27-212
               

               
Cow position:
               
chr9:19539360-19539165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
27-217
               

               
Cow position:
               
chr9:6192196-6192391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
76, 142
               

               
Conread position:
               
27-221
               

               
Cow position:
               
chr9:20406901-20406702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chr9:8914529-8914332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 148
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chr9:9405792-9405982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
27-227
               

               
Cow position:
               
chr9:3924879-3924686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
193, 63
               

               
Conread position:
               
27-234
               

               
Cow position:
               
chr9:45285268-45285474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
168, 110
               

               
Conread position:
               
27-236
               

               
Cow position:
               
chr9:3722603-3722821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
27-236
               

               
Cow position:
               
chr9:59795017-59795235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
27-237
               

               
Cow position:
               
chr9:30189363-30189148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
27-237
               

               
Cow position:
               
chr9:52724953-52725162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 164
               

               
Conread position:
               
27-240
               

               
Cow position:
               
chr9:62400219-62400009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
27-241
               

               
Cow position:
               
chr9:824217-824010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 17
               

               
Conread position:
               
27-241
               

               
Cow position:
               
chr9:33846810-33847030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 218
               

               
Conread position:
               
27-251
               

               
Cow position:
               
chr9:14961212-14960982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 139
               

               
Conread position:
               
27-252
               

               
Cow position:
               
chr9:36490632-36490858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
27-258
               

               
Cow position:
               
chr9:32812611-32812375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 219
               

               
Conread position:
               
27-262
               

               
Cow position:
               
chr9:38793284-38793038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
27-266
               

               
Cow position:
               
chr9:23028057-23027822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
199, 61
               

               
Conread position:
               
27-266
               

               
Cow position:
               
chr9:50976983-50977227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
119, 183
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr9:9199521-9199764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
158, 124
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr9:33940870-33940621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
27-269
               

               
Cow position:
               
chr9:18162893-18163144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
27-269
               

               
Cow position:
               
chr9:46316525-46316768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
166, 76
               

               
Conread position:
               
27-269
               

               
Cow position:
               
chr9:64155593-64155836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
76, 186
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr9:10127405-10127659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr9:10308744-10308987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr9:22696480-22696236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr9:28948115-28947872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
169, 135
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr9:35375686-35375439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr9:42445720-42445969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr9:56032065-56032301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr9:58133759-58134006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 143
               

               
Conread position:
               
27-271
               

               
Cow position:
               
chr9:12184011-12183760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
27-271
               

               
Cow position:
               
chr9:19903315-19903095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
169, 47
               

               
Conread position:
               
27-308
               

               
Cow position:
               
chr9:4928894-4928602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
28-166
               

               
Cow position:
               
chr9:41645976-41646115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
28-192
               

               
Cow position:
               
chr9:31662732-31662561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
28-203
               

               
Cow position:
               
chr9:3379378-3379207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
167, 46
               

               
Conread position:
               
28-219
               

               
Cow position:
               
chr9:61739179-61738994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
113, 61
               

               
Conread position:
               
28-223
               

               
Cow position:
               
chr9:8778974-8779173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 124
               

               
Conread position:
               
28-227
               

               
Cow position:
               
chr9:58204928-58204725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
74, 128
               

               
Conread position:
               
28-230
               

               
Cow position:
               
chr9:847657-847856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
28-236
               

               
Cow position:
               
chr9:59924806-59924595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 177
               

               
Conread position:
               
28-241
               

               
Cow position:
               
chr9:2022959-2022740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 208
               

               
Conread position:
               
28-253
               

               
Cow position:
               
chr9:20810799-20811032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
75, 164
               

               
Conread position:
               
28-269
               

               
Cow position:
               
chr9:5399980-5399751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
28-269
               

               
Cow position:
               
chr9:34374667-34374909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
28-270
               

               
Cow position:
               
chr9:4861654-4861398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
28-270
               

               
Cow position:
               
chr9:5327516-5327272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 97
               

               
Conread position:
               
28-270
               

               
Cow position:
               
chr9:14796516-14796756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
116, 70
               

               
Conread position:
               
28-270
               

               
Cow position:
               
chr9:20416247-20416496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
74, 138
               

               
Conread position:
               
28-270
               

               
Cow position:
               
chr9:29034777-29035022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
168, 63
               

               
Conread position:
               
28-271
               

               
Cow position:
               
chr9:22638362-22638115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
119, 76
               

               
Conread position:
               
28-342
               

               
Cow position:
               
chr9:1712223-1712535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
189, 23
               

               
Conread position:
               
29-148
               

               
Cow position:
               
chr9:55262318-55262437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-227
               

               
Cow position:
               
chr9:24399424-24399621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
29-230
               

               
Cow position:
               
chr9:44822041-44822249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 181
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr9:44553008-44552798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
128, 184
               

               
Conread position:
               
29-240
               

               
Cow position:
               
chr9:51311935-51311716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
29-243
               

               
Cow position:
               
chr9:1614985-1614763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 146
               

               
Conread position:
               
29-269
               

               
Cow position:
               
chr9:24887462-24887221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
29-269
               

               
Cow position:
               
chr9:54716361-54716592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
219, 21
               

               
Conread position:
               
29-270
               

               
Cow position:
               
chr9:214201-214447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 171
               

               
Conread position:
               
29-270
               

               
Cow position:
               
chr9:5433896-5433646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 69
               

               
Conread position:
               
29-270
               

               
Cow position:
               
chr9:32676947-32676691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
30-161
               

               
Cow position:
               
chr9:32306178-32306310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
30-193
               

               
Cow position:
               
chr9:51204985-51204817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
30-243
               

               
Cow position:
               
chr9:56087808-56088024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
30-269
               

               
Cow position:
               
chr9:59386517-59386754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
30-270
               

               
Cow position:
               
chr9:32306976-32307219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
65, 134
               

               
Conread position:
               
30-270
               

               
Cow position:
               
chr9:58979660-58979411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
33-227
               

               
Cow position:
               
chr9:45170912-45171106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
160, 56
               

               
Conread position:
               
34-210
               

               
Cow position:
               
chr9:20318322-20318498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
161, 120
               

               
Conread position:
               
34-221
               

               
Cow position:
               
chr9:38875318-38875510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
34-270
               

               
Cow position:
               
chr9:63194864-63194621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
34-271
               

               
Cow position:
               
chr9:25922079-25921836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
35-174
               

               
Cow position:
               
chr9:36586564-36586702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
35-245
               

               
Cow position:
               
chr9:4646073-4646283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
114, 83
               

               
Conread position:
               
36-148
               

               
Cow position:
               
chr9:48017569-48017681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
36-179
               

               
Cow position:
               
chr9:62134367-62134509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
36-205
               

               
Cow position:
               
chr9:5071352-5071521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
132, 85
               

               
Conread position:
               
36-218
               

               
Cow position:
               
chr9:31347208-31347025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
152, 116
               

               
Conread position:
               
36-236
               

               
Cow position:
               
chr9:33681938-33681735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
36-241
               

               
Cow position:
               
chr9:44408294-44408088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
157, 145
               

               
Conread position:
               
36-243
               

               
Cow position:
               
chr9:2718203-2718416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
36-243
               

               
Cow position:
               
chr9:18215655-18215866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 183
               

               
Conread position:
               
36-245
               

               
Cow position:
               
chr9:5209839-5209622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 186
               

               
Conread position:
               
36-252
               

               
Cow position:
               
chr9:55256295-55256512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr9:50076320-50076075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 192
               

               
Conread position:
               
36-274
               

               
Cow position:
               
chr9:44218016-44217778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
57, 184
               

               
Conread position:
               
37-237
               

               
Cow position:
               
chr9:31814125-31814325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
149, 83
               

               
Conread position:
               
37-243
               

               
Cow position:
               
chr9:47954970-47955182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 185
               

               
Conread position:
               
37-270
               

               
Cow position:
               
chr9:17410931-17411179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
37-270
               

               
Cow position:
               
chr9:48106866-48107102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
38-269
               

               
Cow position:
               
chr9:31078830-31079067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
38-270
               

               
Cow position:
               
chr9:18216848-18217085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 153
               

               
Conread position:
               
39-270
               

               
Cow position:
               
chr9:29092055-29091806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
40-270
               

               
Cow position:
               
chr9:388765-389006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
41-226
               

               
Cow position:
               
chr9:24850492-24850304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 126
               

               
Conread position:
               
41-245
               

               
Cow position:
               
chr9:51005136-51004936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
154, 30
               

               
Conread position:
               
42-214
               

               
Cow position:
               
chr9:28735726-28735553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
103, 118
               

               
Conread position:
               
42-226
               

               
Cow position:
               
chr9:25657762-25657571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
42-227
               

               
Cow position:
               
chr9:48343850-48343662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
42-233
               

               
Cow position:
               
chr9:31640070-31640268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
42-247
               

               
Cow position:
               
chr9:13169420-13169620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
152, 66
               

               
Conread position:
               
42-258
               

               
Cow position:
               
chr9:34742480-34742698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 143
               

               
Conread position:
               
42-268
               

               
Cow position:
               
chr9:61544897-61544667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
42-269
               

               
Cow position:
               
chr9:20848184-20847944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
42-269
               

               
Cow position:
               
chr9:33119634-33119873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
42-270
               

               
Cow position:
               
chr9:8338278-8338041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
42-283
               

               
Cow position:
               
chr9:7363275-7363025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
43-181
               

               
Cow position:
               
chr9:53109773-53109640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
43-212
               

               
Cow position:
               
chr9:61493274-61493096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
43-258
               

               
Cow position:
               
chr9:10144225-10144453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
44-267
               

               
Cow position:
               
chr9:50139527-50139304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
100, 56
               

               
Conread position:
               
45-193
               

               
Cow position:
               
chr9:52131263-52131114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
45-223
               

               
Cow position:
               
chr9:34957806-34957988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
45-241
               

               
Cow position:
               
chr9:16182245-16182441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
45-269
               

               
Cow position:
               
chr9:9573580-9573344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
45-270
               

               
Cow position:
               
chr9:35359857-35360090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 140
               

               
Conread position:
               
45-278
               

               
Cow position:
               
chr9:20942365-20942604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
46-187
               

               
Cow position:
               
chr9:33823342-33823201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-223
               

               
Cow position:
               
chr9:766906-767089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
46-236
               

               
Cow position:
               
chr9:1729432-1729618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
46-269
               

               
Cow position:
               
chr9:35203128-35202892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
46-270
               

               
Cow position:
               
chr9:49710088-49709859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 152
               

               
Conread position:
               
47-271
               

               
Cow position:
               
chr9:6840254-6840006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
47-283
               

               
Cow position:
               
chr9:40604193-40603948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
55, 234
               

               
Conread position:
               
49-233
               

               
Cow position:
               
chr9:48773582-48773401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
119, 54
               

               
Conread position:
               
51-224
               

               
Cow position:
               
chr9:35128733-35128559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 52
               

               
Conread position:
               
51-242
               

               
Cow position:
               
chr9:29825275-29825079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
52-236
               

               
Cow position:
               
chr9:5238634-5238452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 136
               

               
Conread position:
               
52-251
               

               
Cow position:
               
chr9:11319394-11319593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
44, 158
               

               
Conread position:
               
53-270
               

               
Cow position:
               
chr9:32711170-32710943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
53-277
               

               
Cow position:
               
chr9:50702875-50703104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
55-270
               

               
Cow position:
               
chr9:15225055-15225282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
56-243
               

               
Cow position:
               
chr9:32829781-32829966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
56-270
               

               
Cow position:
               
chr9:13221659-13221878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
56-270
               

               
Cow position:
               
chr9:40302891-40303119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
58-237
               

               
Cow position:
               
chr9:43623492-43623308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
58-239
               

               
Cow position:
               
chr9:31292920-31292737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
58-268
               

               
Cow position:
               
chr9:4267748-4267966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 156
               

               
Conread position:
               
58-269
               

               
Cow position:
               
chr9:59507313-59507104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
161, 36
               

               
Conread position:
               
58-277
               

               
Cow position:
               
chr9:52619884-52619655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 130
               

               
Conread position:
               
59-242
               

               
Cow position:
               
chr9:45141374-45141555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
136, 77
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr9:33038227-33038450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
60-268
               

               
Cow position:
               
chr9:6339032-6338809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
61-239
               

               
Cow position:
               
chr9:58972262-58972443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 155
               

               
Conread position:
               
61-242
               

               
Cow position:
               
chr9:11102586-11102768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 76
               

               
Conread position:
               
61-267
               

               
Cow position:
               
chr9:50667653-50667438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
62-269
               

               
Cow position:
               
chr9:48628260-48628043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
63-268
               

               
Cow position:
               
chr9:1532105-1532311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
63-269
               

               
Cow position:
               
chr9:30477557-30477760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
63-270
               

               
Cow position:
               
chr9:53762928-53762710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
64-261
               

               
Cow position:
               
chr9:58734601-58734391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
64-270
               

               
Cow position:
               
chr9:27279544-27279323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 165
               

               
Conread position:
               
64-277
               

               
Cow position:
               
chr9:3371805-3371574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 186
               

               
Conread position:
               
65-234
               

               
Cow position:
               
chr9:35027948-35028113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
66-268
               

               
Cow position:
               
chr9:6117923-6118133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
67-245
               

               
Cow position:
               
chr9:1973165-1972984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
68-237
               

               
Cow position:
               
chr9:43048404-43048579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
68-270
               

               
Cow position:
               
chr9:42062338-42062113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
69-269
               

               
Cow position:
               
chr9:30652489-30652695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
119, 7
               

               
Conread position:
               
69-270
               

               
Cow position:
               
chr9:28354739-28354532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
70-270
               

               
Cow position:
               
chr9:17799850-17799640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
70-307
               

               
Cow position:
               
chr9:1879596-1879354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 124
               

               
Conread position:
               
71-264
               

               
Cow position:
               
chr9:1909167-1909361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
124, 18
               

               
Conread position:
               
72-223
               

               
Cow position:
               
chr9:51011322-51011481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 111
               

               
Conread position:
               
72-269
               

               
Cow position:
               
chr9:35890707-35890912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
74-245
               

               
Cow position:
               
chr9:29578460-29578288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
76-269
               

               
Cow position:
               
chr9:43444009-43443816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 40
               

               
Conread position:
               
76-270
               

               
Cow position:
               
chr9:11123278-11123471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
118, 18
               

               
Conread position:
               
77-261
               

               
Cow position:
               
chr9:11198129-11198320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
80-240
               

               
Cow position:
               
chr9:20704942-20704786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
80-268
               

               
Cow position:
               
chr9:61303217-61303016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
81-228
               

               
Cow position:
               
chr9:8920207-8920057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
90-270
               

               
Cow position:
               
chr9:19493263-19493452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
90-270
               

               
Cow position:
               
chr9:37678087-37677904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
91-270
               

               
Cow position:
               
chr9:50543221-50543412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
94-252
               

               
Cow position:
               
chr9:49279670-49279504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 163
               

               
Conread position:
               
94-267
               

               
Cow position:
               
chr9:14358358-14358180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
94-270
               

               
Cow position:
               
chr9:8525036-8524856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
94-270
               

               
Cow position:
               
chr9:49417183-49417001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
95-252
               

               
Cow position:
               
chr9:62668447-62668288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
97-241
               

               
Cow position:
               
chr9:28451965-28452111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
97-243
               

               
Cow position:
               
chr9:30124113-30123963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
98-268
               

               
Cow position:
               
chr9:24873020-24872849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
99-270
               

               
Cow position:
               
chr9:31270969-31270794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
101-238
               

               
Cow position:
               
chr9:62151290-62151151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
94, 77
               

               
Conread position:
               
101-268
               

               
Cow position:
               
chr9:9654123-9654295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
94, 164
               

               
Conread position:
               
101-270
               

               
Cow position:
               
chr9:32115422-32115587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
103-269
               

               
Cow position:
               
chr9:34106909-34106738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
104-267
               

               
Cow position:
               
chr9:31638455-31638626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
108-268
               

               
Cow position:
               
chr9:8901042-8901211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
109-243
               

               
Cow position:
               
chr9:11168911-11168774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
110-270
               

               
Cow position:
               
chr9:47445847-47446014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 102
               

               
Conread position:
               
111-268
               

               
Cow position:
               
chr9:6851890-6852055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
113-245
               

               
Cow position:
               
chr9:40215420-40215285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
116-271
               

               
Cow position:
               
chr9:17518315-17518476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
118-268
               

               
Cow position:
               
chr9:4323986-4324141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
122-269
               

               
Cow position:
               
chr9:31557561-31557716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
122-269
               

               
Cow position:
               
chr9:51720734-51720885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
122-271
               

               
Cow position:
               
chr9:50202737-50202586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
129-270
               

               
Cow position:
               
chr9:11303917-11304065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
131-270
               

               
Cow position:
               
chr9:33697185-33697042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
65, 19
               
Show alignments to all cow chromosomes.