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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010098G02.5
        

               
Conread position:
               
1-112
               

               
Cow position:
               
chr19:14169224-14169335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr19:14135357-14135534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr19:6914958-6914767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 29
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr19:20378821-20379007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
135, 27
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:4602480-4602670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
119, 29
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr19:18766244-18766046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr19:21836015-21836272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr19:30007403-30007153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr19:6601500-6601779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr19:28014699-28014412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
143, 149
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr19:55161008-55160723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr19:13121069-13121346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr19:52158759-52158464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 110
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr19:48960611-48960324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr19:18504950-18505239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
124, 22
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr19:26754252-26753964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr19:28924974-28924686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chr19:20941491-20941330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr19:35072835-35073021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
2-196
               

               
Cow position:
               
chr19:41089400-41089595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr19:53791218-53791477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr19:53776352-53776629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr19:33748073-33747778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr19:41024437-41024154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr19:33912408-33912698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr19:10528068-10528255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr19:42544743-42544552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr19:26175989-26176185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr19:23297949-23297754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr19:1900513-1900723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr19:8209187-8209440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
19, 130
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr19:34757779-34758052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr19:40324038-40323768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr19:21224967-21224701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
198, 32
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr19:39795404-39795129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
118, 101
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr19:4297900-4297615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
252, 117
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr19:6278405-6278115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 267
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr19:29468908-29468621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
3-297
               

               
Cow position:
               
chr19:38842342-38842633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-297
               

               
Cow position:
               
chr19:46094411-46094711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr19:42564359-42564064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
258, 25
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr19:43035458-43035170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
126, 96
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr19:42217099-42217278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
4-198
               

               
Cow position:
               
chr19:29139419-29139225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr19:22959656-22959851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr19:19431428-19431173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
176, 26
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr19:22992175-22992460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
268, 0
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr19:11559823-11560115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
165, 25
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr19:12645435-12645715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
215, 26
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr19:25041031-25041309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr19:42236253-42235954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr19:52750542-52750832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
5-156
               

               
Cow position:
               
chr19:4328660-4328810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
5-184
               

               
Cow position:
               
chr19:12714315-12714137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr19:52356465-52356250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr19:29368607-29368337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr19:29626112-29625842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr19:36845457-36845177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
6-179
               

               
Cow position:
               
chr19:18632064-18632235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:22871044-22871231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr19:38411081-38410797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr19:6309712-6309990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr19:11191409-11191689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
6-299
               

               
Cow position:
               
chr19:12698529-12698244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
202, 40
               

               
Conread position:
               
7-181
               

               
Cow position:
               
chr19:54105667-54105493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-196
               

               
Cow position:
               
chr19:6020870-6021057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chr19:7158502-7158793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
30, 262
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chr19:28554141-28554422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr19:12747564-12747848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr19:30227733-30227448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
7-307
               

               
Cow position:
               
chr19:26056319-26056026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
122, 97
               

               
Conread position:
               
8-216
               

               
Cow position:
               
chr19:24068073-24068277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr19:12760890-12761105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr19:2068474-2068227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr19:10930219-10930456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr19:16621149-16621424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
204, 22
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr19:32031029-32031330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 251
               

               
Conread position:
               
9-197
               

               
Cow position:
               
chr19:33691348-33691155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
93, 124
               

               
Conread position:
               
9-197
               

               
Cow position:
               
chr19:37420999-37420812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
9-262
               

               
Cow position:
               
chr19:23378882-23378635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr19:44054-43780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
9-297
               

               
Cow position:
               
chr19:56149854-56150140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 49
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr19:2577769-2577491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
258, 105
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr19:20622865-20622582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
10-132
               

               
Cow position:
               
chr19:48729024-48729144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
10-176
               

               
Cow position:
               
chr19:25582510-25582350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
10-189
               

               
Cow position:
               
chr19:12945097-12945274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
10-189
               

               
Cow position:
               
chr19:51294080-51294254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
10-191
               

               
Cow position:
               
chr19:42776639-42776462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
10-248
               

               
Cow position:
               
chr19:8185411-8185176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
10-264
               

               
Cow position:
               
chr19:16032928-16032675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
10-267
               

               
Cow position:
               
chr19:13325293-13325531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr19:7147851-7148111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
10-297
               

               
Cow position:
               
chr19:43413985-43413706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
183, 19
               

               
Conread position:
               
10-298
               

               
Cow position:
               
chr19:55590443-55590157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
250, 193
               

               
Conread position:
               
11-188
               

               
Cow position:
               
chr19:53189642-53189822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
11-191
               

               
Cow position:
               
chr19:19468590-19468414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
11-261
               

               
Cow position:
               
chr19:43190137-43189882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
11-266
               

               
Cow position:
               
chr19:23088188-23087939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
11-295
               

               
Cow position:
               
chr19:1791487-1791780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
11-298
               

               
Cow position:
               
chr19:13266999-13267263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-300
               

               
Cow position:
               
chr19:39758728-39758446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chr19:18050961-18051123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
12-189
               

               
Cow position:
               
chr19:30917737-30917912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr19:4537065-4537239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr19:35762052-35762321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
195, 27
               

               
Conread position:
               
12-297
               

               
Cow position:
               
chr19:23784218-23784488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
12-297
               

               
Cow position:
               
chr19:53899932-53900216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
12-298
               

               
Cow position:
               
chr19:729542-729817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
13-187
               

               
Cow position:
               
chr19:4485943-4486116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
13-188
               

               
Cow position:
               
chr19:52728814-52728645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
13-196
               

               
Cow position:
               
chr19:47363871-47363690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
13-278
               

               
Cow position:
               
chr19:11646768-11646510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
233, 10
               

               
Conread position:
               
13-293
               

               
Cow position:
               
chr19:18317197-18316920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
13-297
               

               
Cow position:
               
chr19:5497197-5496915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
190, 16
               

               
Conread position:
               
13-297
               

               
Cow position:
               
chr19:39584152-39583869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
187, 17
               

               
Conread position:
               
14-191
               

               
Cow position:
               
chr19:4339428-4339611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 9
               

               
Conread position:
               
14-256
               

               
Cow position:
               
chr19:2372229-2372468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
186, 9
               

               
Conread position:
               
14-297
               

               
Cow position:
               
chr19:36097428-36097151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 129
               

               
Conread position:
               
16-193
               

               
Cow position:
               
chr19:36191453-36191281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
174, 7
               

               
Conread position:
               
16-251
               

               
Cow position:
               
chr19:25927208-25927438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
177, 83
               

               
Conread position:
               
16-269
               

               
Cow position:
               
chr19:25726684-25726929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
73, 7
               

               
Conread position:
               
16-297
               

               
Cow position:
               
chr19:46455040-46454774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
253, 7
               

               
Conread position:
               
17-188
               

               
Cow position:
               
chr19:36978472-36978300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr19:15438308-15438027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr19:15887115-15887397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr19:38111667-38111399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
18-265
               

               
Cow position:
               
chr19:49221422-49221666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
242, 86
               

               
Conread position:
               
19-298
               

               
Cow position:
               
chr19:35321938-35322209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
63, 73
               

               
Conread position:
               
22-182
               

               
Cow position:
               
chr19:41388956-41388801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
22-190
               

               
Cow position:
               
chr19:49290261-49290426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
22-196
               

               
Cow position:
               
chr19:31763692-31763516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
140, 53
               

               
Conread position:
               
22-295
               

               
Cow position:
               
chr19:33033248-33033511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
222, 78
               

               
Conread position:
               
22-297
               

               
Cow position:
               
chr19:10213863-10213598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
22-298
               

               
Cow position:
               
chr19:39664379-39664652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
22-298
               

               
Cow position:
               
chr19:55583733-55583455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 220
               

               
Conread position:
               
23-261
               

               
Cow position:
               
chr19:43431126-43431367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
23-264
               

               
Cow position:
               
chr19:35921046-35920810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
23-298
               

               
Cow position:
               
chr19:268543-268281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
24-156
               

               
Cow position:
               
chr19:22838455-22838323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-260
               

               
Cow position:
               
chr19:14253829-14253593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-263
               

               
Cow position:
               
chr19:10734968-10735200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
123, 41
               

               
Conread position:
               
24-296
               

               
Cow position:
               
chr19:4459247-4459512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
25-183
               

               
Cow position:
               
chr19:11211082-11211240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-295
               

               
Cow position:
               
chr19:24693197-24692934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
25-297
               

               
Cow position:
               
chr19:5912764-5913028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
26-154
               

               
Cow position:
               
chr19:13439666-13439538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-159
               

               
Cow position:
               
chr19:38637592-38637725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-298
               

               
Cow position:
               
chr19:24453316-24453582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
236, 0
               

               
Conread position:
               
27-192
               

               
Cow position:
               
chr19:31729457-31729293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
27-197
               

               
Cow position:
               
chr19:28918601-28918434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 73
               

               
Conread position:
               
27-198
               

               
Cow position:
               
chr19:5521967-5522132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
29-189
               

               
Cow position:
               
chr19:28699762-28699919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
29-298
               

               
Cow position:
               
chr19:39622596-39622875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
30-184
               

               
Cow position:
               
chr19:8603529-8603372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
30-188
               

               
Cow position:
               
chr19:27968506-27968663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
30-189
               

               
Cow position:
               
chr19:4586361-4586515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
30-189
               

               
Cow position:
               
chr19:7558734-7558577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
30-189
               

               
Cow position:
               
chr19:12497194-12497041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
30-189
               

               
Cow position:
               
chr19:14588593-14588437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
30-189
               

               
Cow position:
               
chr19:23831537-23831375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
30-189
               

               
Cow position:
               
chr19:37082629-37082471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
30-189
               

               
Cow position:
               
chr19:41188024-41187871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
30-190
               

               
Cow position:
               
chr19:37109420-37109572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
30-191
               

               
Cow position:
               
chr19:23416691-23416853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
30-196
               

               
Cow position:
               
chr19:7794838-7794678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
30-196
               

               
Cow position:
               
chr19:30384909-30385068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
30-196
               

               
Cow position:
               
chr19:41718774-41718939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 102
               

               
Conread position:
               
30-197
               

               
Cow position:
               
chr19:20547539-20547707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
30-198
               

               
Cow position:
               
chr19:33610078-33609912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
30-201
               

               
Cow position:
               
chr19:19738191-19738020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-234
               

               
Cow position:
               
chr19:10574078-10574282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-245
               

               
Cow position:
               
chr19:35246133-35245918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
181, 172
               

               
Conread position:
               
30-247
               

               
Cow position:
               
chr19:44572276-44572057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 185
               

               
Conread position:
               
30-260
               

               
Cow position:
               
chr19:18054071-18054295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
30-261
               

               
Cow position:
               
chr19:15853114-15852896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
30-261
               

               
Cow position:
               
chr19:38732326-38732099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
30-262
               

               
Cow position:
               
chr19:22043169-22043393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
175, 74
               

               
Conread position:
               
30-264
               

               
Cow position:
               
chr19:15789893-15789659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
224, 85
               

               
Conread position:
               
30-265
               

               
Cow position:
               
chr19:26269037-26269272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
71, 166
               

               
Conread position:
               
30-266
               

               
Cow position:
               
chr19:25570780-25570553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
30-266
               

               
Cow position:
               
chr19:28810128-28810362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
144, 70
               

               
Conread position:
               
30-268
               

               
Cow position:
               
chr19:7674455-7674216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
225, 0
               

               
Conread position:
               
30-268
               

               
Cow position:
               
chr19:27965957-27966190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
30-269
               

               
Cow position:
               
chr19:23085046-23084805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
226, 0
               

               
Conread position:
               
30-287
               

               
Cow position:
               
chr19:12052659-12052910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 70
               

               
Conread position:
               
30-287
               

               
Cow position:
               
chr19:12067932-12067681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 73
               

               
Conread position:
               
30-288
               

               
Cow position:
               
chr19:17355047-17354794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
30-291
               

               
Cow position:
               
chr19:20665879-20666137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
236, 0
               

               
Conread position:
               
30-292
               

               
Cow position:
               
chr19:10186695-10186434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
30-293
               

               
Cow position:
               
chr19:8244983-8245244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
235, 0
               

               
Conread position:
               
30-293
               

               
Cow position:
               
chr19:11110541-11110800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
30-295
               

               
Cow position:
               
chr19:42767915-42768169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
125, 75
               

               
Conread position:
               
30-295
               

               
Cow position:
               
chr19:52223570-52223310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
218, 160
               

               
Conread position:
               
30-297
               

               
Cow position:
               
chr19:3621617-3621359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
30-297
               

               
Cow position:
               
chr19:9531436-9531169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
189, 14
               

               
Conread position:
               
30-297
               

               
Cow position:
               
chr19:11439301-11439036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
30-297
               

               
Cow position:
               
chr19:13933633-13933366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
177, 233
               

               
Conread position:
               
30-297
               

               
Cow position:
               
chr19:21199338-21199065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 248
               

               
Conread position:
               
30-297
               

               
Cow position:
               
chr19:23005171-23005432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
218, 66
               

               
Conread position:
               
30-297
               

               
Cow position:
               
chr19:24759699-24759956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
150, 63
               

               
Conread position:
               
30-297
               

               
Cow position:
               
chr19:34420597-34420341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
30-297
               

               
Cow position:
               
chr19:36222121-36221856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
84, 125
               

               
Conread position:
               
30-297
               

               
Cow position:
               
chr19:40126977-40127238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
30-297
               

               
Cow position:
               
chr19:47184892-47185154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
30-298
               

               
Cow position:
               
chr19:10238924-10238663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
30-298
               

               
Cow position:
               
chr19:10755489-10755236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
30-298
               

               
Cow position:
               
chr19:25382494-25382759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
75, 227
               

               
Conread position:
               
30-298
               

               
Cow position:
               
chr19:37466873-37467132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
30-298
               

               
Cow position:
               
chr19:51620989-51621256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
194, 237
               

               
Conread position:
               
30-299
               

               
Cow position:
               
chr19:41497455-41497723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
30-299
               

               
Cow position:
               
chr19:53371704-53371972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 205
               

               
Conread position:
               
30-299
               

               
Cow position:
               
chr19:55247821-55247563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
30-299
               

               
Cow position:
               
chr19:55957379-55957649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
67, 187
               

               
Conread position:
               
30-305
               

               
Cow position:
               
chr19:6344270-6343987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
69, 142
               

               
Conread position:
               
31-188
               

               
Cow position:
               
chr19:14631854-14632006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
31-191
               

               
Cow position:
               
chr19:22414080-22414236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
31-261
               

               
Cow position:
               
chr19:24062461-24062238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
31-296
               

               
Cow position:
               
chr19:7668882-7668628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr19:2220885-2221151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 0
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr19:4987579-4987839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
216, 83
               

               
Conread position:
               
31-298
               

               
Cow position:
               
chr19:8869762-8869507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
32-198
               

               
Cow position:
               
chr19:14545503-14545337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
32-297
               

               
Cow position:
               
chr19:22872763-22873025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr19:6687812-6688070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
94, 8
               

               
Conread position:
               
32-299
               

               
Cow position:
               
chr19:51285823-51285560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
241, 26
               

               
Conread position:
               
33-196
               

               
Cow position:
               
chr19:33307769-33307606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
33-298
               

               
Cow position:
               
chr19:47859129-47859387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
33-299
               

               
Cow position:
               
chr19:32505923-32506195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
34-184
               

               
Cow position:
               
chr19:55385980-55385830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
34-189
               

               
Cow position:
               
chr19:38597251-38597102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
34-189
               

               
Cow position:
               
chr19:51637229-51637072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
34-196
               

               
Cow position:
               
chr19:39698471-39698311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
34-261
               

               
Cow position:
               
chr19:10538374-10538591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
34-296
               

               
Cow position:
               
chr19:52185573-52185841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 237
               

               
Conread position:
               
34-297
               

               
Cow position:
               
chr19:20661228-20661483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
34-297
               

               
Cow position:
               
chr19:34288199-34287948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
34-297
               

               
Cow position:
               
chr19:39576390-39576642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr19:8128492-8128228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr19:23304305-23304563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr19:34166552-34166296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr19:39361337-39361070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
34-303
               

               
Cow position:
               
chr19:7637051-7637316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
35-298
               

               
Cow position:
               
chr19:8864926-8864675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
36-244
               

               
Cow position:
               
chr19:20437450-20437243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 181
               

               
Conread position:
               
36-262
               

               
Cow position:
               
chr19:35938294-35938069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr19:33903244-33903475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
225, 80
               

               
Conread position:
               
38-262
               

               
Cow position:
               
chr19:23889306-23889528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
38-298
               

               
Cow position:
               
chr19:16096373-16096629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
39-298
               

               
Cow position:
               
chr19:25526458-25526207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
39-298
               

               
Cow position:
               
chr19:35870966-35870721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
225, 57
               

               
Conread position:
               
40-259
               

               
Cow position:
               
chr19:9390964-9391189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
40-261
               

               
Cow position:
               
chr19:34608021-34608237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
41-263
               

               
Cow position:
               
chr19:54943143-54942927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
41-297
               

               
Cow position:
               
chr19:23394962-23394713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
41-298
               

               
Cow position:
               
chr19:47453608-47453357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
42-178
               

               
Cow position:
               
chr19:18984331-18984195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr19:18515863-18515676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
42-270
               

               
Cow position:
               
chr19:14472602-14472829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 162
               

               
Conread position:
               
42-291
               

               
Cow position:
               
chr19:42517078-42517323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
42-297
               

               
Cow position:
               
chr19:21378290-21378543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
42-298
               

               
Cow position:
               
chr19:13488330-13488578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
168, 53
               

               
Conread position:
               
42-298
               

               
Cow position:
               
chr19:25410678-25410916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
42-302
               

               
Cow position:
               
chr19:21817142-21816886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
255, 159
               

               
Conread position:
               
43-250
               

               
Cow position:
               
chr19:55655529-55655331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
168, 12
               

               
Conread position:
               
43-292
               

               
Cow position:
               
chr19:33988244-33987997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
174, 73
               

               
Conread position:
               
44-196
               

               
Cow position:
               
chr19:42868192-42868040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
44-198
               

               
Cow position:
               
chr19:35444330-35444484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
44-284
               

               
Cow position:
               
chr19:18826386-18826625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
221, 0
               

               
Conread position:
               
44-297
               

               
Cow position:
               
chr19:33913704-33913452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
167, 159
               

               
Conread position:
               
55-264
               

               
Cow position:
               
chr19:31652724-31652515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
55-298
               

               
Cow position:
               
chr19:1664020-1664266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 217
               

               
Conread position:
               
55-299
               

               
Cow position:
               
chr19:51751003-51751244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
230, 44
               

               
Conread position:
               
60-302
               

               
Cow position:
               
chr19:28447597-28447362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
212, 45
               

               
Conread position:
               
61-298
               

               
Cow position:
               
chr19:32457801-32457571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
146, 63
               

               
Conread position:
               
77-298
               

               
Cow position:
               
chr19:39254299-39254524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
85-298
               

               
Cow position:
               
chr19:34819052-34819263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
91-299
               

               
Cow position:
               
chr19:56137905-56137705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
95-298
               

               
Cow position:
               
chr19:30886525-30886323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 164
               

               
Conread position:
               
96-298
               

               
Cow position:
               
chr19:12036381-12036582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 165
               

               
Conread position:
               
97-298
               

               
Cow position:
               
chr19:43292178-43291979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 157
               

               
Conread position:
               
102-297
               

               
Cow position:
               
chr19:31691152-31690963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
117-284
               

               
Cow position:
               
chr19:33469125-33468960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
148, 0
               
Show alignments to all cow chromosomes.