Cow genome map

Conread name: Ss1.1-Thy1-THY010098G02.5

Conread position: 1-158
Cow position: chr3:23733267-23733422 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 33

Conread position: 1-172
Cow position: chr3:7408640-7408471 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 1-184
Cow position: chr3:74127296-74127485 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 1-186
Cow position: chr3:76168428-76168610 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 1-188
Cow position: chr3:18471508-18471321 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 113

Conread position: 1-189
Cow position: chr3:49787759-49787577 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-196
Cow position: chr3:29334207-29334402 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 148, 39

Conread position: 1-198
Cow position: chr3:70402843-70402654 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 100

Conread position: 1-226
Cow position: chr3:27286717-27286500 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1-230
Cow position: chr3:32377016-32376792 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 1-234
Cow position: chr3:45314556-45314318 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 1-264
Cow position: chr3:69144900-69144637 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 202, 212

Conread position: 1-268
Cow position: chr3:20033939-20034206 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 176
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 120

Conread position: 1-268
Cow position: chr3:54049825-54050092 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 235, 147

Conread position: 1-270
Cow position: chr3:81039545-81039810 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 56, 22

Conread position: 1-271
Cow position: chr3:50768885-50768615 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 100

Conread position: 1-271
Cow position: chr3:75080954-75080700 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 1-290
Cow position: chr3:32570063-32569774 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 266

Conread position: 1-293
Cow position: chr3:5707005-5707295 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 265

Conread position: 1-294
Cow position: chr3:51033574-51033285 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 110, 29

Conread position: 1-295
Cow position: chr3:2675238-2674946 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 25, 219

Conread position: 1-297
Cow position: chr3:12705343-12705630 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 259, 103

Conread position: 1-297
Cow position: chr3:72474125-72473828 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 123, 29

Conread position: 1-297
Cow position: chr3:83797611-83797919 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 280

Conread position: 1-298
Cow position: chr3:1830371-1830660 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 1-298
Cow position: chr3:3656719-3656428 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 135, 60

Conread position: 1-298
Cow position: chr3:68145648-68145927 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 67

Conread position: 1-298
Cow position: chr3:73837512-73837802 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 118

Conread position: 1-298
Cow position: chr3:77582312-77582024 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 195
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 106

Conread position: 1-302
Cow position: chr3:18059908-18059611 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 202, 103

Conread position: 1-302
Cow position: chr3:32787666-32787369 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 126, 91

Conread position: 1-303
Cow position: chr3:46146525-46146824 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 199
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 199, 61

Conread position: 1-313
Cow position: chr3:80597932-80597621 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 199
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 247

Conread position: 2-199
Cow position: chr3:23734887-23735079 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 2-201
Cow position: chr3:13928019-13927822 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 191, 21

Conread position: 2-231
Cow position: chr3:82195685-82195463 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 2-264
Cow position: chr3:10842016-10841756 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 221, 21

Conread position: 2-264
Cow position: chr3:39996691-39996947 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 191, 38

Conread position: 2-264
Cow position: chr3:52487833-52487559 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 223

Conread position: 2-268
Cow position: chr3:78443370-78443625 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 2-279
Cow position: chr3:53428717-53428989 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 258, 27

Conread position: 2-298
Cow position: chr3:53271032-53270744 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 2-298
Cow position: chr3:71496926-71497229 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 2-309
Cow position: chr3:60933620-60933317 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 200
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 246, 33

Conread position: 3-154
Cow position: chr3:33308-33457 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 24

Conread position: 3-189
Cow position: chr3:42484128-42483945 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 162, 31

Conread position: 3-196
Cow position: chr3:8147321-8147514 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 126, 78

Conread position: 3-196
Cow position: chr3:58614665-58614468 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 106, 27

Conread position: 3-230
Cow position: chr3:65308248-65308476 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 164

Conread position: 3-241
Cow position: chr3:32317627-32317865 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 229, 132

Conread position: 3-242
Cow position: chr3:5551604-5551847 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 31

Conread position: 3-259
Cow position: chr3:78092308-78092563 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 33, 92

Conread position: 3-262
Cow position: chr3:56948894-56949142 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 3-264
Cow position: chr3:79902699-79902440 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 146, 0

Conread position: 3-297
Cow position: chr3:15671951-15672245 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 186
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 276, 161

Conread position: 3-297
Cow position: chr3:39661250-39661540 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 193
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 34, 199

Conread position: 3-297
Cow position: chr3:57704531-57704238 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 189, 20

Conread position: 3-297
Cow position: chr3:59035240-59034953 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 243, 26

Conread position: 3-297
Cow position: chr3:59391923-59392201 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 174, 0

Conread position: 3-298
Cow position: chr3:9662970-9663257 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 3-298
Cow position: chr3:55970715-55970421 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 114, 20

Conread position: 3-302
Cow position: chr3:55712633-55712341 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 253, 81

Conread position: 4-160
Cow position: chr3:42933684-42933528 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 4-185
Cow position: chr3:69849100-69849270 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 4-188
Cow position: chr3:66884832-66885010 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 119, 19

Conread position: 4-189
Cow position: chr3:44534331-44534517 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 91

Conread position: 4-189
Cow position: chr3:79398346-79398161 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 4-196
Cow position: chr3:59926833-59926632 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 116, 26

Conread position: 4-197
Cow position: chr3:19611153-19611341 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 4-245
Cow position: chr3:41863821-41863587 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 226, 25

Conread position: 4-255
Cow position: chr3:2518341-2518586 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 71, 19

Conread position: 4-255
Cow position: chr3:75107972-75107727 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 4-260
Cow position: chr3:53318608-53318349 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 24

Conread position: 4-293
Cow position: chr3:55094027-55094314 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 63

Conread position: 4-296
Cow position: chr3:79824718-79825004 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 4-297
Cow position: chr3:14801946-14801657 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 58

Conread position: 4-297
Cow position: chr3:59605043-59604760 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 100, 0

Conread position: 4-298
Cow position: chr3:2025407-2025100 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 4-298
Cow position: chr3:56678154-56678439 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 203, 25

Conread position: 4-307
Cow position: chr3:13301648-13301943 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 295, 85

Conread position: 5-188
Cow position: chr3:74234381-74234206 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 5-196
Cow position: chr3:7924019-7923828 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 162, 29

Conread position: 5-199
Cow position: chr3:72745354-72745553 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 191

Conread position: 5-262
Cow position: chr3:61224550-61224798 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 25

Conread position: 5-264
Cow position: chr3:41129915-41129655 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 167
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 5-292
Cow position: chr3:27976325-27976606 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 45, 23

Conread position: 5-293
Cow position: chr3:47417373-47417646 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 139, 31

Conread position: 5-297
Cow position: chr3:49679332-49679047 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 92, 28

Conread position: 5-297
Cow position: chr3:56583050-56582753 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 142

Conread position: 5-298
Cow position: chr3:4268377-4268668 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 195, 23

Conread position: 5-298
Cow position: chr3:48241811-48241531 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 60

Conread position: 5-302
Cow position: chr3:15953882-15954177 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 294, 254

Conread position: 6-151
Cow position: chr3:66563986-66563839 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 6-183
Cow position: chr3:36411891-36412061 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-187
Cow position: chr3:22078277-22078096 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 6-189
Cow position: chr3:83934921-83934744 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 6-190
Cow position: chr3:621640-621452 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 6-191
Cow position: chr3:33460400-33460592 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 6-196
Cow position: chr3:4194210-4194396 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 75, 22

Conread position: 6-196
Cow position: chr3:79893299-79893486 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 136, 17

Conread position: 6-264
Cow position: chr3:80733650-80733909 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 6-297
Cow position: chr3:189074-188779 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 39

Conread position: 6-297
Cow position: chr3:3316610-3316897 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 17

Conread position: 6-297
Cow position: chr3:55189552-55189841 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 105, 24

Conread position: 7-189
Cow position: chr3:68624420-68624236 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 101

Conread position: 7-195
Cow position: chr3:58558477-58558292 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 7-229
Cow position: chr3:18699911-18700132 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 7-272
Cow position: chr3:27082843-27083113 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 186, 103

Conread position: 7-282
Cow position: chr3:13240877-13241150 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 270, 20

Conread position: 7-293
Cow position: chr3:26992771-26992486 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 181
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 269, 0

Conread position: 7-297
Cow position: chr3:27696767-27697061 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 92, 23

Conread position: 7-298
Cow position: chr3:3913243-3913530 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 92, 34

Conread position: 7-298
Cow position: chr3:64197023-64196738 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 7-303
Cow position: chr3:54481604-54481894 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 194
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 114, 67

Conread position: 7-316
Cow position: chr3:79813816-79813498 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 207
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 95, 264

Conread position: 8-189
Cow position: chr3:59317897-59317721 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 114, 92

Conread position: 8-191
Cow position: chr3:74050509-74050685 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 8-197
Cow position: chr3:76056093-76056274 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 8-246
Cow position: chr3:73525038-73525276 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 8-260
Cow position: chr3:3556745-3556492 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 246, 0

Conread position: 8-271
Cow position: chr3:49363303-49363046 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 8-297
Cow position: chr3:27274720-27274445 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 8-297
Cow position: chr3:30008708-30008998 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 185
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 76

Conread position: 8-297
Cow position: chr3:74601311-74601027 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 94

Conread position: 8-298
Cow position: chr3:55318701-55318988 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 199, 110

Conread position: 9-181
Cow position: chr3:73410479-73410313 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 9-188
Cow position: chr3:35079309-35079488 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-197
Cow position: chr3:78258556-78258744 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 14

Conread position: 9-247
Cow position: chr3:4120175-4120405 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 9-264
Cow position: chr3:74087977-74088235 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 180

Conread position: 9-270
Cow position: chr3:22165220-22165478 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 251, 21

Conread position: 9-274
Cow position: chr3:79271514-79271782 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 221, 21

Conread position: 9-290
Cow position: chr3:80709668-80709948 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 14

Conread position: 9-293
Cow position: chr3:58134487-58134768 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 116

Conread position: 9-297
Cow position: chr3:36375342-36375626 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 91, 96

Conread position: 9-298
Cow position: chr3:4319916-4319626 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 246

Conread position: 10-143
Cow position: chr3:75974884-75975017 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 10-178
Cow position: chr3:20888466-20888633 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 143, 0

Conread position: 10-189
Cow position: chr3:16710604-16710781 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 18

Conread position: 10-196
Cow position: chr3:2016625-2016447 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 10-196
Cow position: chr3:26337822-26338008 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 20

Conread position: 10-244
Cow position: chr3:35624348-35624581 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 10-247
Cow position: chr3:44960140-44959903 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 10-261
Cow position: chr3:40212840-40213086 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 10-262
Cow position: chr3:48468371-48468119 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 10-297
Cow position: chr3:18143913-18144206 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 262

Conread position: 10-298
Cow position: chr3:23920232-23920514 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 10-302
Cow position: chr3:68587214-68586930 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 95

Conread position: 10-304
Cow position: chr3:59299764-59299484 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 172, 19

Conread position: 11-188
Cow position: chr3:43016249-43016431 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 12

Conread position: 11-189
Cow position: chr3:42589294-42589117 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 42

Conread position: 11-190
Cow position: chr3:48537560-48537380 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 11-296
Cow position: chr3:18067324-18067052 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 257, 51

Conread position: 11-298
Cow position: chr3:59040765-59040483 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 14, 115

Conread position: 11-298
Cow position: chr3:75687246-75687523 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 269, 16

Conread position: 12-187
Cow position: chr3:58929340-58929514 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 12-187
Cow position: chr3:80023122-80023290 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 12-196
Cow position: chr3:4071578-4071759 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 12-196
Cow position: chr3:24220389-24220566 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 12-196
Cow position: chr3:68648369-68648186 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 105, 18

Conread position: 12-234
Cow position: chr3:7381639-7381855 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 70, 0

Conread position: 12-261
Cow position: chr3:46792576-46792331 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 244, 80

Conread position: 12-266
Cow position: chr3:83889441-83889189 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 12-270
Cow position: chr3:5696539-5696793 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 95, 16

Conread position: 12-279
Cow position: chr3:19199180-19198915 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 59

Conread position: 12-298
Cow position: chr3:45667149-45667430 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 84

Conread position: 12-298
Cow position: chr3:53910299-53910027 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 12-298
Cow position: chr3:65058892-65058616 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 88

Conread position: 13-189
Cow position: chr3:53875570-53875746 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 13-197
Cow position: chr3:51153236-51153056 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 13-198
Cow position: chr3:83705343-83705527 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 177, 0

Conread position: 13-255
Cow position: chr3:49996525-49996770 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 116, 0

Conread position: 13-255
Cow position: chr3:63316318-63316085 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 13-260
Cow position: chr3:15159220-15158979 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 13-263
Cow position: chr3:82085015-82084768 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 44

Conread position: 13-282
Cow position: chr3:12090868-12090597 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 107, 17

Conread position: 13-296
Cow position: chr3:60264531-60264801 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 17

Conread position: 13-298
Cow position: chr3:2648315-2648597 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 113

Conread position: 13-298
Cow position: chr3:15443535-15443815 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 13-298
Cow position: chr3:49383161-49382862 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 10

Conread position: 13-298
Cow position: chr3:75777877-75778147 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 181, 87

Conread position: 13-302
Cow position: chr3:30180275-30179991 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 218, 91

Conread position: 14-183
Cow position: chr3:55105955-55106124 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 14-184
Cow position: chr3:20065955-20066126 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 14-189
Cow position: chr3:72027829-72027656 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 14-196
Cow position: chr3:64800359-64800538 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 14-223
Cow position: chr3:58101868-58101664 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 10, 92

Conread position: 14-247
Cow position: chr3:6728130-6728369 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 207

Conread position: 14-259
Cow position: chr3:14770695-14770934 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 241, 87

Conread position: 14-261
Cow position: chr3:68156918-68156670 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 93, 50

Conread position: 14-262
Cow position: chr3:17134520-17134280 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 14-297
Cow position: chr3:9117227-9116943 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 196

Conread position: 14-297
Cow position: chr3:18180152-18179861 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 9

Conread position: 15-163
Cow position: chr3:76138648-76138502 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 15-178
Cow position: chr3:60371174-60371012 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 15-188
Cow position: chr3:8522965-8523134 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 15-194
Cow position: chr3:12178250-12178071 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 15

Conread position: 15-195
Cow position: chr3:11027467-11027287 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 15-264
Cow position: chr3:49482524-49482773 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 110, 49

Conread position: 15-293
Cow position: chr3:17694813-17695085 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 182
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 129, 8

Conread position: 15-297
Cow position: chr3:54506896-54506619 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 90, 0

Conread position: 15-297
Cow position: chr3:70761934-70762207 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 16-187
Cow position: chr3:61023834-61024002 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 16-191
Cow position: chr3:2637135-2636966 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 54

Conread position: 16-196
Cow position: chr3:9718059-9718240 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 16-199
Cow position: chr3:62789762-62789946 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 110, 7

Conread position: 16-263
Cow position: chr3:6182044-6182276 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 16-271
Cow position: chr3:68303505-68303252 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 107, 13

Conread position: 16-294
Cow position: chr3:63845129-63844847 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 184, 255

Conread position: 16-297
Cow position: chr3:39969674-39969950 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 173, 88

Conread position: 16-298
Cow position: chr3:48363258-48362991 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 16-302
Cow position: chr3:13890673-13890385 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 253

Conread position: 17-187
Cow position: chr3:22899544-22899712 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 17-188
Cow position: chr3:22868528-22868700 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 162, 78

Conread position: 17-189
Cow position: chr3:25702144-25702323 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 13

Conread position: 17-189
Cow position: chr3:29234491-29234662 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 94, 13

Conread position: 19-298
Cow position: chr3:56476859-56476593 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 22-171
Cow position: chr3:61680500-61680351 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 22-178
Cow position: chr3:6547609-6547453 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 22-187
Cow position: chr3:18764288-18764122 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 85

Conread position: 22-189
Cow position: chr3:4931647-4931822 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 22-196
Cow position: chr3:3453765-3453591 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 22-261
Cow position: chr3:11281951-11281713 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 22-262
Cow position: chr3:48483360-48483124 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 223, 18

Conread position: 22-266
Cow position: chr3:23408181-23408415 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 188, 43

Conread position: 22-296
Cow position: chr3:37041599-37041331 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 22-298
Cow position: chr3:2506291-2506561 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 148

Conread position: 22-298
Cow position: chr3:45183638-45183918 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 219

Conread position: 23-244
Cow position: chr3:22888832-22889053 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 97, 58

Conread position: 23-263
Cow position: chr3:8181767-8182006 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 73, 157

Conread position: 23-298
Cow position: chr3:11640913-11640642 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 239, 7

Conread position: 24-189
Cow position: chr3:15160698-15160539 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 24-196
Cow position: chr3:54350253-54350429 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 24-196
Cow position: chr3:80173180-80173011 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 24-223
Cow position: chr3:25735722-25735921 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 24-259
Cow position: chr3:23131987-23132220 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 24-265
Cow position: chr3:15950736-15950970 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 81

Conread position: 24-266
Cow position: chr3:2638114-2637868 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 24-270
Cow position: chr3:24468203-24468443 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 188, 40

Conread position: 24-292
Cow position: chr3:19586046-19585782 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 93

Conread position: 24-297
Cow position: chr3:38035407-38035675 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 125

Conread position: 24-299
Cow position: chr3:53222194-53221927 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 6, 77

Conread position: 25-174
Cow position: chr3:32436818-32436669 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 107

Conread position: 25-176
Cow position: chr3:29944040-29943888 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 25-189
Cow position: chr3:19044588-19044747 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 136, 0

Conread position: 25-191
Cow position: chr3:986195-986031 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 0

Conread position: 25-195
Cow position: chr3:53604564-53604733 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 25-258
Cow position: chr3:73335459-73335234 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 107, 37

Conread position: 25-262
Cow position: chr3:9121022-9120791 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 25-262
Cow position: chr3:79272396-79272628 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 92, 79

Conread position: 25-264
Cow position: chr3:21866858-21867094 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 25-264
Cow position: chr3:31309174-31309410 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 109, 29

Conread position: 25-268
Cow position: chr3:43233682-43233445 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 236, 5

Conread position: 25-297
Cow position: chr3:54373677-54373943 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 243, 0

Conread position: 25-298
Cow position: chr3:14553052-14552791 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 26-263
Cow position: chr3:29828234-29828473 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 26-298
Cow position: chr3:84174483-84174215 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 106, 116

Conread position: 27-201
Cow position: chr3:11023632-11023451 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 116

Conread position: 27-287
Cow position: chr3:59610541-59610796 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 189, 66

Conread position: 29-287
Cow position: chr3:75480174-75479926 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 92, 71

Conread position: 29-298
Cow position: chr3:44932688-44932427 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 70, 0

Conread position: 29-298
Cow position: chr3:48459153-48459418 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 29-298
Cow position: chr3:75050447-75050705 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 30-179
Cow position: chr3:78115415-78115564 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 30-182
Cow position: chr3:67407192-67407340 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 68

Conread position: 30-183
Cow position: chr3:43388950-43389103 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 30-184
Cow position: chr3:44218943-44218789 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 30-184
Cow position: chr3:58562876-58562717 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 90

Conread position: 30-188
Cow position: chr3:52845730-52845576 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 30-188
Cow position: chr3:77098649-77098803 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 30-189
Cow position: chr3:23037333-23037490 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 30-189
Cow position: chr3:37641501-37641345 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 30-189
Cow position: chr3:59681732-59681885 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 30-189
Cow position: chr3:63069186-63069347 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 30-189
Cow position: chr3:64909920-64910077 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 30-189
Cow position: chr3:75966607-75966765 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 115, 74

Conread position: 30-189
Cow position: chr3:76300949-76300790 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 30-189
Cow position: chr3:80958334-80958492 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 153, 0

Conread position: 30-189
Cow position: chr3:84807151-84807309 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 30-190
Cow position: chr3:28896846-28897004 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 30-191
Cow position: chr3:15859207-15859362 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 78

Conread position: 30-191
Cow position: chr3:18479121-18479281 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 125, 0

Conread position: 30-194
Cow position: chr3:11193340-11193173 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 99, 139

Conread position: 30-196
Cow position: chr3:21694402-21694236 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 54

Conread position: 30-196
Cow position: chr3:48300284-48300449 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 30-196
Cow position: chr3:55730291-55730457 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 30-196
Cow position: chr3:59810252-59810417 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 153, 0

Conread position: 30-196
Cow position: chr3:79105405-79105571 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 30-198
Cow position: chr3:60186328-60186155 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 91

Conread position: 30-198
Cow position: chr3:62186333-62186161 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 30-198
Cow position: chr3:68289858-68289686 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 30-199
Cow position: chr3:51150305-51150137 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 96, 22

Conread position: 30-226
Cow position: chr3:12669314-12669118 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 81, 141

Conread position: 30-229
Cow position: chr3:59947843-59947644 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 30-230
Cow position: chr3:47198951-47199149 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 30-233
Cow position: chr3:81666972-81666774 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 30-240
Cow position: chr3:5703351-5703146 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 131, 0

Conread position: 30-243
Cow position: chr3:28902587-28902794 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 30-245
Cow position: chr3:84137639-84137852 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 30-246
Cow position: chr3:7860075-7860291 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 30-250
Cow position: chr3:84928282-84928061 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 30-255
Cow position: chr3:1011667-1011439 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 91, 107

Conread position: 30-256
Cow position: chr3:82366304-82366081 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 134, 73

Conread position: 30-260
Cow position: chr3:25904864-25905101 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 101, 74

Conread position: 30-260
Cow position: chr3:59702349-59702120 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 87, 175

Conread position: 30-262
Cow position: chr3:16752079-16752312 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 162

Conread position: 30-263
Cow position: chr3:11253990-11254223 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 30-264
Cow position: chr3:29946561-29946330 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 225, 10

Conread position: 30-265
Cow position: chr3:7581543-7581775 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 44

Conread position: 30-266
Cow position: chr3:39912512-39912747 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 173, 34

Conread position: 30-270
Cow position: chr3:20841704-20841936 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 60

Conread position: 30-270
Cow position: chr3:69785445-69785689 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 95, 63

Conread position: 30-274
Cow position: chr3:23105190-23105429 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 240, 70

Conread position: 30-288
Cow position: chr3:54551535-54551790 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 148, 0

Conread position: 30-292
Cow position: chr3:76270063-76269817 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 30-293
Cow position: chr3:47316203-47316461 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 174
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 68

Conread position: 30-293
Cow position: chr3:53592511-53592774 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 169
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 242, 219

Conread position: 30-297
Cow position: chr3:210497-210232 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 237, 0

Conread position: 30-297
Cow position: chr3:7763833-7763572 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 153, 0

Conread position: 30-297
Cow position: chr3:17456092-17456352 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 77, 103

Conread position: 30-297
Cow position: chr3:45211479-45211210 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 231, 257

Conread position: 30-297
Cow position: chr3:49118855-49119110 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 106

Conread position: 30-297
Cow position: chr3:49460751-49461014 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 172
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 246, 57

Conread position: 30-297
Cow position: chr3:55177576-55177835 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 30-297
Cow position: chr3:75853160-75853414 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 259, 37

Conread position: 30-298
Cow position: chr3:2392794-2393048 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 143, 74

Conread position: 30-298
Cow position: chr3:3985492-3985242 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 70

Conread position: 30-298
Cow position: chr3:15153863-15153603 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 30-298
Cow position: chr3:22221501-22221234 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 224, 74

Conread position: 30-298
Cow position: chr3:35055801-35056064 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 173, 95

Conread position: 30-298
Cow position: chr3:45882074-45881818 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 30-298
Cow position: chr3:48900155-48900426 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 226, 176

Conread position: 30-298
Cow position: chr3:53739007-53739271 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 58

Conread position: 30-298
Cow position: chr3:66631168-66631436 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 96, 48

Conread position: 30-298
Cow position: chr3:70333794-70334049 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 109, 0

Conread position: 30-298
Cow position: chr3:71231573-71231313 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 80, 90

Conread position: 30-298
Cow position: chr3:72342423-72342159 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 236, 0

Conread position: 30-298
Cow position: chr3:73395290-73395036 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 30-298
Cow position: chr3:76267798-76268064 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 6, 71

Conread position: 30-298
Cow position: chr3:79884305-79884567 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 198

Conread position: 30-298
Cow position: chr3:81087461-81087718 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 122, 161

Conread position: 30-299
Cow position: chr3:55819924-55819664 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 237, 66

Conread position: 30-299
Cow position: chr3:65969349-65969075 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 179
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 30-302
Cow position: chr3:1517338-1517603 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 30-302
Cow position: chr3:34871743-34871475 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 135, 0

Conread position: 30-303
Cow position: chr3:71474232-71474500 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 249, 67

Conread position: 30-307
Cow position: chr3:18687076-18686814 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 31-189
Cow position: chr3:23804676-23804524 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 31-189
Cow position: chr3:74515162-74515319 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 65

Conread position: 31-196
Cow position: chr3:31793707-31793872 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 31-202
Cow position: chr3:11896696-11896523 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 99, 8

Conread position: 31-247
Cow position: chr3:15973744-15973527 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 31-295
Cow position: chr3:3883646-3883901 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 31-298
Cow position: chr3:16333979-16333715 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 9, 223

Conread position: 31-298
Cow position: chr3:65413092-65413365 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 188

Conread position: 31-299
Cow position: chr3:20802466-20802710 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 32-298
Cow position: chr3:71238322-71238071 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 32-298
Cow position: chr3:83988707-83988445 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 29

Conread position: 32-299
Cow position: chr3:77188613-77188351 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 186, 93

Conread position: 33-184
Cow position: chr3:20021440-20021293 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 33-293
Cow position: chr3:21014784-21015041 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 149, 31

Conread position: 33-297
Cow position: chr3:23168896-23169151 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 33-298
Cow position: chr3:30463004-30463255 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 186, 40

Conread position: 33-298
Cow position: chr3:59945299-59945040 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 226, 0

Conread position: 34-188
Cow position: chr3:40957957-40958107 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 34-265
Cow position: chr3:53150504-53150267 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 55, 50

Conread position: 34-280
Cow position: chr3:81234559-81234318 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 34-289
Cow position: chr3:14547170-14546924 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 34-293
Cow position: chr3:54067965-54067711 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 221, 27

Conread position: 34-297
Cow position: chr3:8061291-8061043 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 34-298
Cow position: chr3:15051781-15052037 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 80

Conread position: 34-298
Cow position: chr3:23471292-23471552 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 220, 61

Conread position: 34-298
Cow position: chr3:31349938-31350191 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 34-298
Cow position: chr3:54100542-54100806 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 75, 225

Conread position: 34-298
Cow position: chr3:60597708-60597456 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 106, 65

Conread position: 34-298
Cow position: chr3:83215440-83215174 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 229

Conread position: 35-189
Cow position: chr3:63860440-63860592 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 35-291
Cow position: chr3:10668709-10668958 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 110, 65

Conread position: 35-294
Cow position: chr3:23203059-23203317 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 220, 126

Conread position: 35-295
Cow position: chr3:7337617-7337866 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 27

Conread position: 35-298
Cow position: chr3:7662027-7661767 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 160

Conread position: 36-196
Cow position: chr3:1028477-1028636 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 92

Conread position: 36-196
Cow position: chr3:77171487-77171327 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 36-198
Cow position: chr3:67942364-67942526 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 36-247
Cow position: chr3:70756470-70756680 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 192, 0

Conread position: 36-255
Cow position: chr3:3584883-3584666 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 36-297
Cow position: chr3:29891237-29891496 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 240, 0

Conread position: 36-301
Cow position: chr3:75238630-75238368 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 7, 168

Conread position: 39-182
Cow position: chr3:62312964-62312821 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 39-182
Cow position: chr3:62370223-62370080 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 39-198
Cow position: chr3:83199679-83199521 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 39-304
Cow position: chr3:1889940-1890205 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 254, 218

Conread position: 41-245
Cow position: chr3:72255254-72255456 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 41-286
Cow position: chr3:79196927-79196683 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 80

Conread position: 41-298
Cow position: chr3:51609020-51609272 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 41-298
Cow position: chr3:57577860-57577612 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 41-298
Cow position: chr3:59000599-59000837 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 42-294
Cow position: chr3:40145630-40145385 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 195, 0

Conread position: 42-297
Cow position: chr3:66900564-66900821 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 69, 10

Conread position: 42-298
Cow position: chr3:53046495-53046748 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 165

Conread position: 42-298
Cow position: chr3:73820202-73820456 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 19

Conread position: 42-301
Cow position: chr3:19793427-19793679 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 251, 73

Conread position: 43-281
Cow position: chr3:9025920-9026157 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 134

Conread position: 43-298
Cow position: chr3:7566259-7566510 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 219, 61

Conread position: 44-298
Cow position: chr3:70334531-70334780 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 217, 0

Conread position: 45-184
Cow position: chr3:17531576-17531714 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 45-297
Cow position: chr3:11987488-11987244 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 48-298
Cow position: chr3:84250392-84250630 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 55-298
Cow position: chr3:52608331-52608094 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 57-291
Cow position: chr3:74134855-74134621 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 29

Conread position: 59-298
Cow position: chr3:72391234-72391000 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 205

Conread position: 60-261
Cow position: chr3:38783753-38783552 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 195, 45

Conread position: 60-298
Cow position: chr3:15388367-15388129 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 140, 202

Conread position: 84-300
Cow position: chr3:36160071-36160283 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 20

Conread position: 95-297
Cow position: chr3:56059925-56059723 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 182

Conread position: 96-298
Cow position: chr3:52863071-52863269 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 154

Conread position: 104-302
Cow position: chr3:57760602-57760409 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 193, 145

Conread position: 107-273
Cow position: chr3:68059416-68059249 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 5, 36

Conread position: 115-298
Cow position: chr3:5365770-5365592 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 115-298
Cow position: chr3:49650481-49650301 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 0

Conread position: 119-299
Cow position: chr3:83928335-83928161 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 130, 0

Show alignments to all cow chromosomes.