• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010104H08.5
        

               
Conread position:
               
208-667
               

               
Cow position:
               
chr22:44741303-44740864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
215-602
               

               
Cow position:
               
chr22:32698987-32698586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 195
               

               
Conread position:
               
217-648
               

               
Cow position:
               
chr22:5016716-5016288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
219-556
               

               
Cow position:
               
chr22:617341-616993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
219-650
               

               
Cow position:
               
chr22:43398220-43397795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
219-666
               

               
Cow position:
               
chr22:22613326-22612874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
26, 132
               

               
Conread position:
               
220-667
               

               
Cow position:
               
chr22:43812222-43812657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 125
               

               
Conread position:
               
223-664
               

               
Cow position:
               
chr22:11370375-11370827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
224-666
               

               
Cow position:
               
chr22:4075669-4076137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
225-602
               

               
Cow position:
               
chr22:12313636-12313249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 140
               

               
Conread position:
               
227-629
               

               
Cow position:
               
chr22:1651700-1651311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
227-668
               

               
Cow position:
               
chr22:40349552-40349110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
228-607
               

               
Cow position:
               
chr22:11601246-11600860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
228-661
               

               
Cow position:
               
chr22:15950177-15950610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
228-664
               

               
Cow position:
               
chr22:12573415-12572967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
228-667
               

               
Cow position:
               
chr22:6754051-6754493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 248
               

               
Conread position:
               
229-650
               

               
Cow position:
               
chr22:1289319-1289741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
229-650
               

               
Cow position:
               
chr22:5616505-5616077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
229-660
               

               
Cow position:
               
chr22:41970947-41971389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
229-666
               

               
Cow position:
               
chr22:864322-864756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 20
               

               
Conread position:
               
229-666
               

               
Cow position:
               
chr22:1309523-1309966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 140
               

               
Conread position:
               
229-666
               

               
Cow position:
               
chr22:3987731-3987274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
229-666
               

               
Cow position:
               
chr22:6622037-6622484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
229-666
               

               
Cow position:
               
chr22:12681589-12682030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
229-666
               

               
Cow position:
               
chr22:25205755-25206208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 165
               

               
Conread position:
               
229-666
               

               
Cow position:
               
chr22:26150905-26151358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
229-666
               

               
Cow position:
               
chr22:36194040-36193623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
229-667
               

               
Cow position:
               
chr22:11696986-11697447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
229-667
               

               
Cow position:
               
chr22:16533281-16532841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
229-668
               

               
Cow position:
               
chr22:15490867-15490419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
23, 142
               

               
Conread position:
               
229-668
               

               
Cow position:
               
chr22:18259425-18258988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 22
               

               
Conread position:
               
229-668
               

               
Cow position:
               
chr22:25943668-25943241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
174, 28
               

               
Conread position:
               
229-668
               

               
Cow position:
               
chr22:33447869-33448315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
229-668
               

               
Cow position:
               
chr22:34895166-34894732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
173, 40
               

               
Conread position:
               
229-668
               

               
Cow position:
               
chr22:36562815-36563264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
229-670
               

               
Cow position:
               
chr22:11131077-11130630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
230-519
               

               
Cow position:
               
chr22:24903801-24903498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 128
               

               
Conread position:
               
230-597
               

               
Cow position:
               
chr22:27730250-27729885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
230-607
               

               
Cow position:
               
chr22:36432764-36433144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
230-666
               

               
Cow position:
               
chr22:17852430-17852861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
230-667
               

               
Cow position:
               
chr22:15567810-15568257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
230-668
               

               
Cow position:
               
chr22:4060739-4061183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 137
               

               
Conread position:
               
230-668
               

               
Cow position:
               
chr22:32327010-32326561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
230-669
               

               
Cow position:
               
chr22:19341401-19340958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
231-641
               

               
Cow position:
               
chr22:18838458-18838037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
161, 111
               

               
Conread position:
               
231-665
               

               
Cow position:
               
chr22:18926564-18926114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
231-666
               

               
Cow position:
               
chr22:1326629-1326181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
231-666
               

               
Cow position:
               
chr22:10295234-10294812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 13
               

               
Conread position:
               
231-668
               

               
Cow position:
               
chr22:28071765-28071314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
231-668
               

               
Cow position:
               
chr22:37202054-37201617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
232-624
               

               
Cow position:
               
chr22:12316013-12315615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
232-666
               

               
Cow position:
               
chr22:13957437-13957888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
232-666
               

               
Cow position:
               
chr22:14178626-14179070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
232-667
               

               
Cow position:
               
chr22:6720875-6721304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
232-667
               

               
Cow position:
               
chr22:7165172-7164715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 8
               

               
Conread position:
               
233-573
               

               
Cow position:
               
chr22:40789762-40789424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
169, 20
               

               
Conread position:
               
233-648
               

               
Cow position:
               
chr22:8733141-8733543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
233-666
               

               
Cow position:
               
chr22:10567509-10567929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
233-666
               

               
Cow position:
               
chr22:17949769-17950195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
233-666
               

               
Cow position:
               
chr22:37066603-37067036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
233-666
               

               
Cow position:
               
chr22:40374811-40374368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
233-667
               

               
Cow position:
               
chr22:28371139-28370708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
233-668
               

               
Cow position:
               
chr22:27171064-27171498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
234-570
               

               
Cow position:
               
chr22:8090328-8090670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
234-666
               

               
Cow position:
               
chr22:26134017-26134473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
234-666
               

               
Cow position:
               
chr22:38313270-38313702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
234-668
               

               
Cow position:
               
chr22:9372730-9372280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
111, 23
               

               
Conread position:
               
236-668
               

               
Cow position:
               
chr22:534692-534253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
166, 62
               

               
Conread position:
               
237-523
               

               
Cow position:
               
chr22:17652633-17652338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
237-632
               

               
Cow position:
               
chr22:30999092-30998693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 119
               

               
Conread position:
               
237-643
               

               
Cow position:
               
chr22:28639954-28640369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
94, 50
               

               
Conread position:
               
237-648
               

               
Cow position:
               
chr22:11613627-11613201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 122
               

               
Conread position:
               
237-668
               

               
Cow position:
               
chr22:30269602-30269175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
233, 14
               

               
Conread position:
               
238-659
               

               
Cow position:
               
chr22:14245237-14245656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 175
               

               
Conread position:
               
238-666
               

               
Cow position:
               
chr22:644578-644999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
238-668
               

               
Cow position:
               
chr22:41982518-41982955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
82, 123
               

               
Conread position:
               
239-666
               

               
Cow position:
               
chr22:26166418-26166854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
239-666
               

               
Cow position:
               
chr22:30699364-30698941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 12
               

               
Conread position:
               
240-572
               

               
Cow position:
               
chr22:16094708-16095045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
240-621
               

               
Cow position:
               
chr22:12803182-12803578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 122
               

               
Conread position:
               
240-624
               

               
Cow position:
               
chr22:4373233-4372845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
240-666
               

               
Cow position:
               
chr22:22860713-22861150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
240-668
               

               
Cow position:
               
chr22:25917242-25916802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
240-668
               

               
Cow position:
               
chr22:44717919-44717471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
242-667
               

               
Cow position:
               
chr22:34441437-34441873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
242-668
               

               
Cow position:
               
chr22:8412727-8412284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
75, 118
               

               
Conread position:
               
243-449
               

               
Cow position:
               
chr22:2184520-2184729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 108
               

               
Conread position:
               
244-590
               

               
Cow position:
               
chr22:30818403-30818049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 7
               

               
Conread position:
               
244-633
               

               
Cow position:
               
chr22:41829040-41829435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
79, 103
               

               
Conread position:
               
244-665
               

               
Cow position:
               
chr22:4357279-4356862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
244-665
               

               
Cow position:
               
chr22:6610164-6610591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
244-666
               

               
Cow position:
               
chr22:6709595-6710013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 115
               

               
Conread position:
               
244-668
               

               
Cow position:
               
chr22:6327574-6328004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 330
               

               
Conread position:
               
244-668
               

               
Cow position:
               
chr22:10122562-10122148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
156, 7
               

               
Conread position:
               
245-668
               

               
Cow position:
               
chr22:28146876-28146444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
64, 119
               

               
Conread position:
               
246-666
               

               
Cow position:
               
chr22:30094436-30094008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
71, 87
               

               
Conread position:
               
247-667
               

               
Cow position:
               
chr22:25742769-25743191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
248-661
               

               
Cow position:
               
chr22:20627024-20626608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 42
               

               
Conread position:
               
251-623
               

               
Cow position:
               
chr22:1849263-1848869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
251-642
               

               
Cow position:
               
chr22:3534119-3533734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
251-668
               

               
Cow position:
               
chr22:6215369-6215794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 59
               

               
Conread position:
               
251-668
               

               
Cow position:
               
chr22:39507852-39508274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
252-615
               

               
Cow position:
               
chr22:12389289-12388904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 109
               

               
Conread position:
               
252-650
               

               
Cow position:
               
chr22:7967888-7967475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
9, 116
               

               
Conread position:
               
252-665
               

               
Cow position:
               
chr22:24066052-24066473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
255-667
               

               
Cow position:
               
chr22:30484088-30483673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
147, 55
               

               
Conread position:
               
256-666
               

               
Cow position:
               
chr22:38939769-38940187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
257-588
               

               
Cow position:
               
chr22:43131372-43131708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 229
               

               
Conread position:
               
257-602
               

               
Cow position:
               
chr22:45796526-45796169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
257-629
               

               
Cow position:
               
chr22:14378510-14378885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 105
               

               
Conread position:
               
257-629
               

               
Cow position:
               
chr22:41898267-41898650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
257-641
               

               
Cow position:
               
chr22:10631570-10631159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
257-657
               

               
Cow position:
               
chr22:10532675-10532265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
145, 69
               

               
Conread position:
               
257-665
               

               
Cow position:
               
chr22:7882732-7882313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
257-666
               

               
Cow position:
               
chr22:8418646-8418230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
257-666
               

               
Cow position:
               
chr22:23180864-23181273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
257-666
               

               
Cow position:
               
chr22:25247091-25246671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
257-666
               

               
Cow position:
               
chr22:43787960-43788367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
147, 53
               

               
Conread position:
               
257-667
               

               
Cow position:
               
chr22:13669985-13670409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 111
               

               
Conread position:
               
257-668
               

               
Cow position:
               
chr22:2095738-2095309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
66, 89
               

               
Conread position:
               
257-668
               

               
Cow position:
               
chr22:4563538-4563122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
257-668
               

               
Cow position:
               
chr22:8877431-8877032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
257-668
               

               
Cow position:
               
chr22:31646665-31646254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
147, 31
               

               
Conread position:
               
258-650
               

               
Cow position:
               
chr22:25361658-25361268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 48
               

               
Conread position:
               
258-666
               

               
Cow position:
               
chr22:3325768-3325343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 109
               

               
Conread position:
               
259-666
               

               
Cow position:
               
chr22:25221723-25222140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
273-573
               

               
Cow position:
               
chr22:45807998-45807695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 84
               

               
Conread position:
               
273-623
               

               
Cow position:
               
chr22:15024943-15025299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 97
               

               
Conread position:
               
273-666
               

               
Cow position:
               
chr22:29289983-29290375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
273-666
               

               
Cow position:
               
chr22:38438989-38439396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
273-668
               

               
Cow position:
               
chr22:28357196-28356795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
273-669
               

               
Cow position:
               
chr22:33485456-33485844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
273-671
               

               
Cow position:
               
chr22:2404046-2403629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
274-667
               

               
Cow position:
               
chr22:4993746-4994160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
285-623
               

               
Cow position:
               
chr22:7252497-7252843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
287-663
               

               
Cow position:
               
chr22:10684948-10685323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
115, 19
               

               
Conread position:
               
288-671
               

               
Cow position:
               
chr22:13735121-13735508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 190
               

               
Conread position:
               
289-666
               

               
Cow position:
               
chr22:9127557-9127167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
302-625
               

               
Cow position:
               
chr22:22908318-22907996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
172, 51
               

               
Conread position:
               
302-664
               

               
Cow position:
               
chr22:40072108-40071733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 15
               

               
Conread position:
               
311-669
               

               
Cow position:
               
chr22:14365836-14366195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
313-668
               

               
Cow position:
               
chr22:34712846-34712474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
316-626
               

               
Cow position:
               
chr22:10421151-10420833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
316-660
               

               
Cow position:
               
chr22:6494279-6493938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
316-660
               

               
Cow position:
               
chr22:8324353-8324013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
317-573
               

               
Cow position:
               
chr22:17224553-17224809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
317-591
               

               
Cow position:
               
chr22:19173819-19173536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
317-650
               

               
Cow position:
               
chr22:43119612-43119951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
317-666
               

               
Cow position:
               
chr22:17764495-17764136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 14
               

               
Conread position:
               
317-666
               

               
Cow position:
               
chr22:21502861-21502497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
317-667
               

               
Cow position:
               
chr22:4119445-4119807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
317-668
               

               
Cow position:
               
chr22:3317239-3316889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
317-668
               

               
Cow position:
               
chr22:3842734-3842387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
317-668
               

               
Cow position:
               
chr22:10323998-10323666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
317-668
               

               
Cow position:
               
chr22:14924615-14924964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
317-668
               

               
Cow position:
               
chr22:32892811-32892456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
317-670
               

               
Cow position:
               
chr22:3950369-3949999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
317-672
               

               
Cow position:
               
chr22:4017590-4017231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 36
               

               
Conread position:
               
318-518
               

               
Cow position:
               
chr22:1983964-1983762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
318-518
               

               
Cow position:
               
chr22:4315745-4315538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
318-595
               

               
Cow position:
               
chr22:31510262-31510535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
318-615
               

               
Cow position:
               
chr22:1563137-1563441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
318-665
               

               
Cow position:
               
chr22:28057934-28058280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
318-668
               

               
Cow position:
               
chr22:27431589-27431923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
318-670
               

               
Cow position:
               
chr22:21012500-21012148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
319-666
               

               
Cow position:
               
chr22:16044301-16044667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
322-585
               

               
Cow position:
               
chr22:45846253-45845989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
322-665
               

               
Cow position:
               
chr22:1279273-1279624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
322-666
               

               
Cow position:
               
chr22:32661621-32661274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
322-666
               

               
Cow position:
               
chr22:45513417-45513759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
322-666
               

               
Cow position:
               
chr22:47927853-47927523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
322-668
               

               
Cow position:
               
chr22:38107794-38107456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
322-671
               

               
Cow position:
               
chr22:21295613-21295968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
323-629
               

               
Cow position:
               
chr22:43743234-43743531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
323-666
               

               
Cow position:
               
chr22:877626-877284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
324-668
               

               
Cow position:
               
chr22:7852074-7851719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
324-668
               

               
Cow position:
               
chr22:8481754-8481407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
326-666
               

               
Cow position:
               
chr22:9977917-9977581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
327-528
               

               
Cow position:
               
chr22:34104565-34104775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
327-544
               

               
Cow position:
               
chr22:12341303-12341079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
327-550
               

               
Cow position:
               
chr22:12527015-12527247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
134, 86
               

               
Conread position:
               
327-562
               

               
Cow position:
               
chr22:25387434-25387190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
327-629
               

               
Cow position:
               
chr22:11458922-11458623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
143, 33
               

               
Conread position:
               
327-629
               

               
Cow position:
               
chr22:27274593-27274894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
327-634
               

               
Cow position:
               
chr22:46567787-46568095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
327-658
               

               
Cow position:
               
chr22:17294829-17295161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
327-664
               

               
Cow position:
               
chr22:13861683-13861352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
327-665
               

               
Cow position:
               
chr22:21890253-21890597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
139, 36
               

               
Conread position:
               
327-666
               

               
Cow position:
               
chr22:590446-590104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
327-666
               

               
Cow position:
               
chr22:1591131-1590782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
327-666
               

               
Cow position:
               
chr22:2216916-2216586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
327-666
               

               
Cow position:
               
chr22:2623412-2623753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
327-666
               

               
Cow position:
               
chr22:3250887-3251228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
327-666
               

               
Cow position:
               
chr22:8115981-8116320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
327-666
               

               
Cow position:
               
chr22:13841246-13840899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
327-666
               

               
Cow position:
               
chr22:17814339-17813990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
327-666
               

               
Cow position:
               
chr22:37029501-37029841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
327-667
               

               
Cow position:
               
chr22:2148675-2148334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
131, 26
               

               
Conread position:
               
327-667
               

               
Cow position:
               
chr22:18020927-18021258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
327-668
               

               
Cow position:
               
chr22:3965293-3964945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
327-668
               

               
Cow position:
               
chr22:15090849-15090500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
327-668
               

               
Cow position:
               
chr22:23857153-23856808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
327-668
               

               
Cow position:
               
chr22:28665390-28665029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
327-668
               

               
Cow position:
               
chr22:30049459-30049813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
327-668
               

               
Cow position:
               
chr22:34750780-34750437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
327-670
               

               
Cow position:
               
chr22:10339012-10339354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
153, 36
               

               
Conread position:
               
328-650
               

               
Cow position:
               
chr22:10633020-10632693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
328-661
               

               
Cow position:
               
chr22:21355035-21355378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
328-668
               

               
Cow position:
               
chr22:15039076-15039425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
328-670
               

               
Cow position:
               
chr22:40048660-40048321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
329-650
               

               
Cow position:
               
chr22:10162072-10161739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
329-650
               

               
Cow position:
               
chr22:13300516-13300187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
329-666
               

               
Cow position:
               
chr22:1067809-1068154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
329-669
               

               
Cow position:
               
chr22:4645876-4645536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
330-666
               

               
Cow position:
               
chr22:846007-845664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
330-666
               

               
Cow position:
               
chr22:8732464-8732800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
330-666
               

               
Cow position:
               
chr22:23115204-23115543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
330-666
               

               
Cow position:
               
chr22:26141378-26141034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
330-667
               

               
Cow position:
               
chr22:10936747-10937072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
144, 23
               

               
Conread position:
               
330-668
               

               
Cow position:
               
chr22:8138161-8138498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
331-660
               

               
Cow position:
               
chr22:10315179-10314845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
331-667
               

               
Cow position:
               
chr22:17152780-17152440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
332-629
               

               
Cow position:
               
chr22:17125684-17125381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
332-667
               

               
Cow position:
               
chr22:44180695-44180354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
333-618
               

               
Cow position:
               
chr22:14638376-14638671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
333-629
               

               
Cow position:
               
chr22:3269387-3269680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
333-660
               

               
Cow position:
               
chr22:36633324-36633000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
333-666
               

               
Cow position:
               
chr22:40720193-40720526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 166
               

               
Conread position:
               
334-661
               

               
Cow position:
               
chr22:19775334-19775659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
336-602
               

               
Cow position:
               
chr22:9283500-9283772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
337-549
               

               
Cow position:
               
chr22:4011281-4011063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
362-650
               

               
Cow position:
               
chr22:27825913-27825614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
362-664
               

               
Cow position:
               
chr22:16812091-16812399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 162
               

               
Conread position:
               
362-666
               

               
Cow position:
               
chr22:15919567-15919873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 92
               

               
Conread position:
               
362-668
               

               
Cow position:
               
chr22:6960923-6960628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
362-668
               

               
Cow position:
               
chr22:36560586-36560900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
362-670
               

               
Cow position:
               
chr22:1484936-1484620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
40, 169
               

               
Conread position:
               
363-544
               

               
Cow position:
               
chr22:38320614-38320794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
363-568
               

               
Cow position:
               
chr22:21393242-21393459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
363-629
               

               
Cow position:
               
chr22:27047341-27047601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
363-633
               

               
Cow position:
               
chr22:3367258-3366992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 95
               

               
Conread position:
               
363-666
               

               
Cow position:
               
chr22:22155677-22155362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 178
               

               
Conread position:
               
363-667
               

               
Cow position:
               
chr22:43291830-43292140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
363-668
               

               
Cow position:
               
chr22:30964200-30963891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 208
               

               
Conread position:
               
364-556
               

               
Cow position:
               
chr22:15731265-15731072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
364-629
               

               
Cow position:
               
chr22:10598456-10598196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
364-649
               

               
Cow position:
               
chr22:15068498-15068204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
38, 142
               

               
Conread position:
               
364-666
               

               
Cow position:
               
chr22:38930436-38930752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
364-669
               

               
Cow position:
               
chr22:14690900-14691217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
365-660
               

               
Cow position:
               
chr22:16251503-16251799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
247, 38
               

               
Conread position:
               
365-666
               

               
Cow position:
               
chr22:22160796-22160482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
365-668
               

               
Cow position:
               
chr22:7838660-7838365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 186
               

               
Conread position:
               
367-668
               

               
Cow position:
               
chr22:3993678-3993370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
371-667
               

               
Cow position:
               
chr22:24611029-24611314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
372-592
               

               
Cow position:
               
chr22:24628595-24628814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
182, 96
               

               
Conread position:
               
372-650
               

               
Cow position:
               
chr22:17307290-17307005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
372-664
               

               
Cow position:
               
chr22:4990104-4990408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
372-665
               

               
Cow position:
               
chr22:34726731-34726435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
372-666
               

               
Cow position:
               
chr22:912161-911864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
31, 124
               

               
Conread position:
               
372-666
               

               
Cow position:
               
chr22:5290913-5290605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
31, 243
               

               
Conread position:
               
372-666
               

               
Cow position:
               
chr22:37324607-37324309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
372-667
               

               
Cow position:
               
chr22:10983413-10983105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 160
               

               
Conread position:
               
372-668
               

               
Cow position:
               
chr22:10919789-10920104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
372-668
               

               
Cow position:
               
chr22:14882053-14882351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
372-668
               

               
Cow position:
               
chr22:17992968-17993270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
372-668
               

               
Cow position:
               
chr22:27550416-27550116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
372-668
               

               
Cow position:
               
chr22:34398393-34398695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 130
               

               
Conread position:
               
373-637
               

               
Cow position:
               
chr22:5675119-5675381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
373-664
               

               
Cow position:
               
chr22:12968007-12968306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 240
               

               
Conread position:
               
373-668
               

               
Cow position:
               
chr22:4651239-4650941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
374-650
               

               
Cow position:
               
chr22:9521205-9520924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 132
               

               
Conread position:
               
374-666
               

               
Cow position:
               
chr22:2913339-2913040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
374-666
               

               
Cow position:
               
chr22:26097559-26097852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
374-668
               

               
Cow position:
               
chr22:26339815-26339520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 130
               

               
Conread position:
               
375-664
               

               
Cow position:
               
chr22:7885050-7884755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 195
               

               
Conread position:
               
376-563
               

               
Cow position:
               
chr22:45019785-45019970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
377-668
               

               
Cow position:
               
chr22:23855031-23854741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
379-666
               

               
Cow position:
               
chr22:4043989-4043695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 134
               

               
Conread position:
               
381-569
               

               
Cow position:
               
chr22:34632189-34631996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
381-624
               

               
Cow position:
               
chr22:10677937-10678181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
388-650
               

               
Cow position:
               
chr22:226407-226665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
394-664
               

               
Cow position:
               
chr22:27292129-27291866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
407-666
               

               
Cow position:
               
chr22:1987020-1986771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
407-666
               

               
Cow position:
               
chr22:39696314-39696058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
407-666
               

               
Cow position:
               
chr22:41270975-41271229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 184
               

               
Conread position:
               
409-667
               

               
Cow position:
               
chr22:32651528-32651268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 197
               

               
Conread position:
               
410-588
               

               
Cow position:
               
chr22:3316127-3315954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
412-571
               

               
Cow position:
               
chr22:27267562-27267397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
412-666
               

               
Cow position:
               
chr22:23865491-23865223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
412-666
               

               
Cow position:
               
chr22:25477069-25476825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
413-668
               

               
Cow position:
               
chr22:5384673-5384415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
415-659
               

               
Cow position:
               
chr22:38980913-38980673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
415-663
               

               
Cow position:
               
chr22:10585685-10585936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
415-665
               

               
Cow position:
               
chr22:25629748-25630008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
415-667
               

               
Cow position:
               
chr22:12946156-12946404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
131, 50
               

               
Conread position:
               
415-668
               

               
Cow position:
               
chr22:36569533-36569782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 161
               

               
Conread position:
               
417-667
               

               
Cow position:
               
chr22:39452612-39452349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
418-668
               

               
Cow position:
               
chr22:26659066-26658815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
419-668
               

               
Cow position:
               
chr22:5042328-5042079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
46, 124
               

               
Conread position:
               
422-668
               

               
Cow position:
               
chr22:47582910-47582666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
424-585
               

               
Cow position:
               
chr22:1874701-1874536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 98
               

               
Conread position:
               
424-665
               

               
Cow position:
               
chr22:45271592-45271344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
424-666
               

               
Cow position:
               
chr22:1640291-1640547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
424-668
               

               
Cow position:
               
chr22:12777582-12777823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
30, 110
               

               
Conread position:
               
424-668
               

               
Cow position:
               
chr22:42612462-42612218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
425-668
               

               
Cow position:
               
chr22:14816423-14816665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
426-650
               

               
Cow position:
               
chr22:34597941-34597708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 88
               

               
Conread position:
               
427-668
               

               
Cow position:
               
chr22:30955033-30954799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
429-668
               

               
Cow position:
               
chr22:2141809-2141574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
430-601
               

               
Cow position:
               
chr22:33386509-33386677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
430-660
               

               
Cow position:
               
chr22:45685031-45685265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
154, 22
               

               
Conread position:
               
430-667
               

               
Cow position:
               
chr22:9734858-9734617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 167
               

               
Conread position:
               
430-667
               

               
Cow position:
               
chr22:37554624-37554865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
430-668
               

               
Cow position:
               
chr22:11257748-11257976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
191, 67
               

               
Conread position:
               
430-668
               

               
Cow position:
               
chr22:11745908-11746146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
172, 91
               

               
Conread position:
               
430-669
               

               
Cow position:
               
chr22:13011266-13011518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
431-661
               

               
Cow position:
               
chr22:14118975-14118741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
104, 31
               

               
Conread position:
               
432-664
               

               
Cow position:
               
chr22:46610788-46611017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
435-668
               

               
Cow position:
               
chr22:27224118-27223893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
437-666
               

               
Cow position:
               
chr22:6122908-6123134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
437-668
               

               
Cow position:
               
chr22:1342727-1342499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
437-668
               

               
Cow position:
               
chr22:24732556-24732787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
438-655
               

               
Cow position:
               
chr22:4338101-4337877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
439-666
               

               
Cow position:
               
chr22:2010795-2010561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 173
               

               
Conread position:
               
440-648
               

               
Cow position:
               
chr22:1727867-1727659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 106
               

               
Conread position:
               
440-650
               

               
Cow position:
               
chr22:11500772-11500556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
440-664
               

               
Cow position:
               
chr22:29642099-29641874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
440-668
               

               
Cow position:
               
chr22:25912915-25912688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
441-668
               

               
Cow position:
               
chr22:2434032-2433800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
444-668
               

               
Cow position:
               
chr22:30115628-30115405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
141, 10
               

               
Conread position:
               
445-665
               

               
Cow position:
               
chr22:8840573-8840348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
447-667
               

               
Cow position:
               
chr22:1974164-1974390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
447-668
               

               
Cow position:
               
chr22:8341257-8341036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
447-668
               

               
Cow position:
               
chr22:28179834-28179603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 7
               

               
Conread position:
               
449-643
               

               
Cow position:
               
chr22:13187858-13187665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
450-667
               

               
Cow position:
               
chr22:39303021-39303245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 183
               

               
Conread position:
               
452-667
               

               
Cow position:
               
chr22:41245221-41245009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
452-668
               

               
Cow position:
               
chr22:23403673-23403881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
453-668
               

               
Cow position:
               
chr22:30473022-30472806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 136
               

               
Conread position:
               
454-665
               

               
Cow position:
               
chr22:1791966-1791751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
454-666
               

               
Cow position:
               
chr22:21408193-21407969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
457-650
               

               
Cow position:
               
chr22:33917925-33918121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 112
               

               
Conread position:
               
457-658
               

               
Cow position:
               
chr22:26316440-26316243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
457-660
               

               
Cow position:
               
chr22:12974419-12974625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
145, 20
               

               
Conread position:
               
457-660
               

               
Cow position:
               
chr22:29013851-29013645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
457-661
               

               
Cow position:
               
chr22:24734341-24734546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
143, 114
               

               
Conread position:
               
457-664
               

               
Cow position:
               
chr22:30712731-30712515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
457-665
               

               
Cow position:
               
chr22:4535353-4535564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
457-666
               

               
Cow position:
               
chr22:26184191-26184399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
457-666
               

               
Cow position:
               
chr22:29256338-29256553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
457-666
               

               
Cow position:
               
chr22:34476029-34476239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 141
               

               
Conread position:
               
457-667
               

               
Cow position:
               
chr22:3960312-3960532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
457-667
               

               
Cow position:
               
chr22:33949026-33949241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 149
               

               
Conread position:
               
457-667
               

               
Cow position:
               
chr22:42684878-42684661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
457-668
               

               
Cow position:
               
chr22:9251042-9251253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
457-668
               

               
Cow position:
               
chr22:31592887-31593101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
95, 117
               

               
Conread position:
               
457-669
               

               
Cow position:
               
chr22:25783953-25784167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
458-646
               

               
Cow position:
               
chr22:3945145-3944956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
458-666
               

               
Cow position:
               
chr22:8446909-8446693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
458-666
               

               
Cow position:
               
chr22:19848425-19848634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
142, 117
               

               
Conread position:
               
458-667
               

               
Cow position:
               
chr22:22997448-22997240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
458-668
               

               
Cow position:
               
chr22:10302987-10302770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
458-668
               

               
Cow position:
               
chr22:25341989-25341780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
458-668
               

               
Cow position:
               
chr22:35520286-35520503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
459-668
               

               
Cow position:
               
chr22:1975581-1975372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
459-668
               

               
Cow position:
               
chr22:16057671-16057461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 128
               

               
Conread position:
               
459-668
               

               
Cow position:
               
chr22:27818970-27818763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
459-668
               

               
Cow position:
               
chr22:36545957-36546171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
459-671
               

               
Cow position:
               
chr22:4161644-4161856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
460-664
               

               
Cow position:
               
chr22:4108768-4108975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
460-665
               

               
Cow position:
               
chr22:6360521-6360725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
132, 109
               

               
Conread position:
               
460-666
               

               
Cow position:
               
chr22:13242409-13242198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
460-667
               

               
Cow position:
               
chr22:5337632-5337837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
461-635
               

               
Cow position:
               
chr22:4974457-4974627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
461-646
               

               
Cow position:
               
chr22:27581406-27581227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
90, 103
               

               
Conread position:
               
461-668
               

               
Cow position:
               
chr22:19653018-19653221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
462-577
               

               
Cow position:
               
chr22:14381368-14381252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
462-624
               

               
Cow position:
               
chr22:12800630-12800467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
462-668
               

               
Cow position:
               
chr22:39293782-39293987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
463-662
               

               
Cow position:
               
chr22:36539699-36539907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 105
               

               
Conread position:
               
464-668
               

               
Cow position:
               
chr22:21905459-21905254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 111
               

               
Conread position:
               
464-668
               

               
Cow position:
               
chr22:45291303-45291093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
468-661
               

               
Cow position:
               
chr22:30515211-30515019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
468-668
               

               
Cow position:
               
chr22:5467408-5467609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 5
               

               
Conread position:
               
468-668
               

               
Cow position:
               
chr22:26107017-26106818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
468-671
               

               
Cow position:
               
chr22:28731634-28731442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
468-672
               

               
Cow position:
               
chr22:30689593-30689387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
132, 29
               

               
Conread position:
               
469-666
               

               
Cow position:
               
chr22:19787720-19787918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
469-667
               

               
Cow position:
               
chr22:13951137-13950934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 189
               

               
Conread position:
               
469-668
               

               
Cow position:
               
chr22:4026566-4026368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
471-668
               

               
Cow position:
               
chr22:15398619-15398818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
472-629
               

               
Cow position:
               
chr22:23689246-23689408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
472-633
               

               
Cow position:
               
chr22:13016839-13016999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
472-658
               

               
Cow position:
               
chr22:9335337-9335513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
473-668
               

               
Cow position:
               
chr22:16621131-16620933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 114
               

               
Conread position:
               
473-668
               

               
Cow position:
               
chr22:26490416-26490221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 129
               

               
Conread position:
               
473-670
               

               
Cow position:
               
chr22:29955044-29955241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
115, 73
               

               
Conread position:
               
474-666
               

               
Cow position:
               
chr22:39472422-39472614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
474-668
               

               
Cow position:
               
chr22:19376663-19376470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
8, 136
               

               
Conread position:
               
476-639
               

               
Cow position:
               
chr22:27512212-27512374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
76, 104
               

               
Conread position:
               
476-666
               

               
Cow position:
               
chr22:35902748-35902933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
480-666
               

               
Cow position:
               
chr22:8063376-8063564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
480-667
               

               
Cow position:
               
chr22:31195025-31194834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
480-668
               

               
Cow position:
               
chr22:11987266-11987457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
71, 100
               

               
Conread position:
               
481-633
               

               
Cow position:
               
chr22:41853839-41853691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
481-664
               

               
Cow position:
               
chr22:33985815-33986002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
481-666
               

               
Cow position:
               
chr22:21526645-21526829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
481-668
               

               
Cow position:
               
chr22:1991424-1991249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
481-668
               

               
Cow position:
               
chr22:16235702-16235890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
483-632
               

               
Cow position:
               
chr22:1081450-1081299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
483-668
               

               
Cow position:
               
chr22:10683715-10683905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
484-632
               

               
Cow position:
               
chr22:11200980-11200833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
484-668
               

               
Cow position:
               
chr22:1609813-1609996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
485-657
               

               
Cow position:
               
chr22:27701156-27700984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
488-667
               

               
Cow position:
               
chr22:30583431-30583251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
116, 7
               

               
Conread position:
               
490-666
               

               
Cow position:
               
chr22:1821935-1822113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 89
               

               
Conread position:
               
497-666
               

               
Cow position:
               
chr22:2502767-2502599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
498-667
               

               
Cow position:
               
chr22:13286381-13286205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
501-602
               

               
Cow position:
               
chr22:3544035-3543934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
501-660
               

               
Cow position:
               
chr22:41137244-41137083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
501-665
               

               
Cow position:
               
chr22:22146159-22145989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 31
               

               
Conread position:
               
501-666
               

               
Cow position:
               
chr22:11489460-11489305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
501-666
               

               
Cow position:
               
chr22:47410801-47410637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
501-668
               

               
Cow position:
               
chr22:852955-852789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
501-668
               

               
Cow position:
               
chr22:34930817-34930988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
501-670
               

               
Cow position:
               
chr22:15292773-15292938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
502-667
               

               
Cow position:
               
chr22:2070899-2070732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
505-658
               

               
Cow position:
               
chr22:14844499-14844340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
505-665
               

               
Cow position:
               
chr22:3253024-3253175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
505-666
               

               
Cow position:
               
chr22:28937975-28938143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
505-668
               

               
Cow position:
               
chr22:23249784-23249952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 153
               

               
Conread position:
               
506-666
               

               
Cow position:
               
chr22:39517105-39516945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
508-647
               

               
Cow position:
               
chr22:17339844-17339982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
508-667
               

               
Cow position:
               
chr22:12898127-12897967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
508-667
               

               
Cow position:
               
chr22:14006071-14005913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
508-668
               

               
Cow position:
               
chr22:19714844-19714686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
508-669
               

               
Cow position:
               
chr22:34986186-34986342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
510-666
               

               
Cow position:
               
chr22:8357532-8357376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
510-667
               

               
Cow position:
               
chr22:40120957-40121117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
513-665
               

               
Cow position:
               
chr22:41980163-41980319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
513-666
               

               
Cow position:
               
chr22:22013635-22013482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
515-668
               

               
Cow position:
               
chr22:13720610-13720765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
521-668
               

               
Cow position:
               
chr22:13889821-13889676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
523-666
               

               
Cow position:
               
chr22:4138197-4138345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
523-668
               

               
Cow position:
               
chr22:21936118-21935972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
80, 139
               

               
Conread position:
               
523-670
               

               
Cow position:
               
chr22:34618637-34618491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
530-668
               

               
Cow position:
               
chr22:28120693-28120551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
531-650
               

               
Cow position:
               
chr22:12381799-12381677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
531-667
               

               
Cow position:
               
chr22:15730758-15730622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
532-665
               

               
Cow position:
               
chr22:3387285-3387417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
534-668
               

               
Cow position:
               
chr22:27066259-27066119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
537-660
               

               
Cow position:
               
chr22:36593826-36593952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
537-666
               

               
Cow position:
               
chr22:31599269-31599145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
537-668
               

               
Cow position:
               
chr22:898652-898516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
547-667
               

               
Cow position:
               
chr22:45106037-45106157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
553-668
               

               
Cow position:
               
chr22:10609204-10609089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.