Cow genome map
| Conread name: | Ss1.1-Thy1-THY010122C10.5 |
| Conread position: | 6-309 |
| Cow position: | chr4:58212382-58212699 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 8-237 |
| Cow position: | chr4:57806917-57806682 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 27 |
| Conread position: | 8-309 |
| Cow position: | chr4:58224100-58224414 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 54, 203 |
| Conread position: | 8-309 |
| Cow position: | chr4:58237715-58238000 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 224 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 12-309 |
| Cow position: | chr4:57804078-57803770 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 12-309 |
| Cow position: | chr4:57811618-57811306 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 12-309 |
| Cow position: | chr4:57815563-57815249 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 50, 222 |
| Conread position: | 14-309 |
| Cow position: | chr4:57822449-57822136 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 14-309 |
| Cow position: | chr4:58228258-58228570 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 48, 220 |
| Conread position: | 153-309 |
| Cow position: | chr4:57929642-57929486 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 92, 64 |
| Conread position: | 272-598 |
| Cow position: | chr4:58258441-58258765 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 28 |
| Conread position: | 287-603 |
| Cow position: | chr4:58224521-58224839 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 291-603 |
| Cow position: | chr4:57815135-57814822 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 291-603 |
| Cow position: | chr4:57929371-57929058 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 291-603 |
| Cow position: | chr4:58238114-58238427 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 293-603 |
| Cow position: | chr4:57803656-57803345 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 293-603 |
| Cow position: | chr4:57822021-57821711 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-603 |
| Cow position: | chr4:58212812-58213120 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 295-603 |
| Cow position: | chr4:58216932-58217239 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 295-603 |
| Cow position: | chr4:58234006-58234313 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 306-600 |
| Cow position: | chr4:57935796-57935493 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 184 |
| Conread position: | 308-603 |
| Cow position: | chr4:57811175-57810882 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 314-598 |
| Cow position: | chr4:58268716-58268995 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 41, 26 |
Show alignments to all cow chromosomes.