Cow genome map
| Conread name: | Ss1.1-Thy1-THY010201H03.5 |
| Conread position: | 37-155 |
| Cow position: | chr3:25779587-25779471 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 79-155 |
| Cow position: | chr3:25700225-25700149 (view UCSC Genome Browser custom track) |
| Alignm length: | 77 |
| Alignm identity: | 72 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 81-155 |
| Cow position: | chr3:25745710-25745636 (view UCSC Genome Browser custom track) |
| Alignm length: | 75 |
| Alignm identity: | 70 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 212-305 |
| Cow position: | chr3:25715190-25715097 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 212-305 |
| Cow position: | chr3:25733652-25733559 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 212-305 |
| Cow position: | chr3:25744564-25744471 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 222-304 |
| Cow position: | chr3:25699051-25698969 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 77 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 222-305 |
| Cow position: | chr3:25778676-25778593 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 78 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-407 |
| Cow position: | chr3:25778496-25778392 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 397-503 |
| Cow position: | chr3:25697989-25697883 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 404-499 |
| Cow position: | chr3:25714154-25714059 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 404-499 |
| Cow position: | chr3:25732616-25732521 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 404-499 |
| Cow position: | chr3:25743629-25743534 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 404-499 |
| Cow position: | chr3:25777296-25777201 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 498-609 |
| Cow position: | chr3:25768170-25768059 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 498-611 |
| Cow position: | chr3:25671052-25671165 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 498-611 |
| Cow position: | chr3:25697802-25697689 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 498-611 |
| Cow position: | chr3:25713973-25713860 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 498-611 |
| Cow position: | chr3:25732435-25732322 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 498-611 |
| Cow position: | chr3:25743447-25743334 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 498-611 |
| Cow position: | chr3:25777115-25777002 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 609-733 |
| Cow position: | chr3:25773967-25773841 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 609-742 |
| Cow position: | chr3:25683446-25683312 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 122, 95 |
| Conread position: | 609-742 |
| Cow position: | chr3:25706201-25706066 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 112, 95 |
| Conread position: | 609-742 |
| Cow position: | chr3:25724925-25724790 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 112, 98 |
| Conread position: | 609-742 |
| Cow position: | chr3:25737512-25737377 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 95 |
Show alignments to all cow chromosomes.