Cow genome map
| Conread name: | Ss1.1-Thy1-THY010202G11.5 |
| Conread position: | 1-80 |
| Cow position: | chr3:68641873-68641952 (view UCSC Genome Browser custom track) |
| Alignm length: | 80 |
| Alignm identity: | 72 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-483 |
| Cow position: | chr3:68643523-68643915 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 92-476 |
| Cow position: | chr3:68669385-68669770 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 0 |
| Conread position: | 94-478 |
| Cow position: | chr3:68684747-68685131 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-483 |
| Cow position: | chr3:68655340-68655728 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-483 |
| Cow position: | chr3:68712909-68713297 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-483 |
| Cow position: | chr3:68884217-68884605 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 471-635 |
| Cow position: | chr3:68714297-68714461 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 472-635 |
| Cow position: | chr3:68885603-68885766 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 483-643 |
| Cow position: | chr3:68644494-68644654 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 134 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 490-643 |
| Cow position: | chr3:68685695-68685848 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 131 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 496-643 |
| Cow position: | chr3:68656328-68656475 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 642-851 |
| Cow position: | chr3:68686783-68686996 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 645-807 |
| Cow position: | chr3:68673324-68673484 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 646-819 |
| Cow position: | chr3:68886733-68886906 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 646-820 |
| Cow position: | chr3:68645002-68645176 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 646-820 |
| Cow position: | chr3:68657326-68657497 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 799-937 |
| Cow position: | chr3:68657686-68657824 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 804-937 |
| Cow position: | chr3:68887096-68887228 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 817-929 |
| Cow position: | chr3:68687158-68687269 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 817-937 |
| Cow position: | chr3:68645388-68645508 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 829-937 |
| Cow position: | chr3:68725633-68725741 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 829-937 |
| Cow position: | chr3:68726148-68726256 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.