Cow genome map
| Conread name: | Ss1.1-Thy1-THY010203A10.5 |
| Conread position: | 467-718 |
| Cow position: | chr12:19808657-19808913 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 527-694 |
| Cow position: | chr12:10471913-10471745 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 532-688 |
| Cow position: | chr12:39710202-39710039 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 538-712 |
| Cow position: | chr12:5896497-5896674 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 146 |
| Conread position: | 545-708 |
| Cow position: | chr12:10161383-10161553 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 64 |
| Conread position: | 547-708 |
| Cow position: | chr12:3572660-3572496 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 548-680 |
| Cow position: | chr12:11187790-11187655 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 85 |
| Conread position: | 549-688 |
| Cow position: | chr12:2837701-2837845 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 549-705 |
| Cow position: | chr12:8467633-8467796 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 549-709 |
| Cow position: | chr12:20791985-20792149 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 549-742 |
| Cow position: | chr12:29758927-29759129 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 550-708 |
| Cow position: | chr12:29801750-29801586 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 551-709 |
| Cow position: | chr12:11306081-11306243 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 553-704 |
| Cow position: | chr12:28214647-28214491 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 561-700 |
| Cow position: | chr12:7936535-7936675 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 43 |
Show alignments to all cow chromosomes.