Cow genome map
| Conread name: | Ss1.1-Thy1-THY010203A10.5 |
| Conread position: | 471-706 |
| Cow position: | chr15:21182336-21182099 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 529-707 |
| Cow position: | chr15:53713121-53712940 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 532-709 |
| Cow position: | chr15:6523163-6523343 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 88 |
| Conread position: | 535-708 |
| Cow position: | chr15:5912105-5912283 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 546-715 |
| Cow position: | chr15:45665936-45665765 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 548-708 |
| Cow position: | chr15:23266042-23265879 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 102 |
| Conread position: | 549-681 |
| Cow position: | chr15:1992923-1992787 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 134 |
| Conread position: | 549-705 |
| Cow position: | chr15:39809772-39809609 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 549-707 |
| Cow position: | chr15:35067198-35067037 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 146 |
| Conread position: | 549-707 |
| Cow position: | chr15:41807275-41807438 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 549-709 |
| Cow position: | chr15:16669158-16669321 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 146 |
| Conread position: | 549-713 |
| Cow position: | chr15:30570406-30570236 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 550-706 |
| Cow position: | chr15:52869082-52868922 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 550-707 |
| Cow position: | chr15:17642459-17642300 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 550-709 |
| Cow position: | chr15:14609984-14610143 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 129, 148 |
| Conread position: | 550-718 |
| Cow position: | chr15:28607906-28608078 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 550-738 |
| Cow position: | chr15:36277930-36278125 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 560-697 |
| Cow position: | chr15:2437355-2437218 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 122 |
| Conread position: | 561-707 |
| Cow position: | chr15:19813246-19813396 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 135 |
| Conread position: | 562-707 |
| Cow position: | chr15:7443674-7443824 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 562-708 |
| Cow position: | chr15:11287132-11287285 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.