Cow genome map
| Conread name: | Ss1.1-Thy1-THY010203A10.5 |
| Conread position: | 527-708 |
| Cow position: | chr18:49436936-49436750 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 529-701 |
| Cow position: | chr18:24663863-24664041 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 539-700 |
| Cow position: | chr18:25846462-25846628 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 543-712 |
| Cow position: | chr18:19213293-19213466 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 548-681 |
| Cow position: | chr18:35470998-35471136 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 549-700 |
| Cow position: | chr18:1740556-1740713 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 549-700 |
| Cow position: | chr18:39474702-39474860 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 549-707 |
| Cow position: | chr18:16259830-16259665 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 549-707 |
| Cow position: | chr18:32861215-32861050 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 550-708 |
| Cow position: | chr18:1701146-1700981 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 551-709 |
| Cow position: | chr18:39500693-39500851 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 92, 30 |
| Conread position: | 552-707 |
| Cow position: | chr18:27405446-27405290 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 553-708 |
| Cow position: | chr18:50881039-50880883 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 561-706 |
| Cow position: | chr18:50242610-50242459 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 561-709 |
| Cow position: | chr18:36456591-36456439 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 136 |
| Conread position: | 563-701 |
| Cow position: | chr18:26667826-26667687 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 25, 114 |
| Conread position: | 563-707 |
| Cow position: | chr18:26866385-26866237 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 44 |
Show alignments to all cow chromosomes.