Cow genome map
| Conread name: | Ss1.1-Thy1-THY010203A10.5 |
| Conread position: | 529-697 |
| Cow position: | chr9:23294056-23294228 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 529-700 |
| Cow position: | chr9:4834396-4834574 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 16, 145 |
| Conread position: | 529-705 |
| Cow position: | chr9:14731750-14731928 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 164 |
| Conread position: | 529-713 |
| Cow position: | chr9:13071773-13071959 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 535-707 |
| Cow position: | chr9:41318571-41318392 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 535-708 |
| Cow position: | chr9:22376679-22376854 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 540-694 |
| Cow position: | chr9:48076304-48076142 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 541-701 |
| Cow position: | chr9:1527377-1527212 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 548-700 |
| Cow position: | chr9:55203226-55203067 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 548-701 |
| Cow position: | chr9:20180168-20180321 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 548-708 |
| Cow position: | chr9:10003481-10003643 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 549-677 |
| Cow position: | chr9:10762489-10762358 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 549-700 |
| Cow position: | chr9:8234042-8234200 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 549-700 |
| Cow position: | chr9:18570956-18570798 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 549-709 |
| Cow position: | chr9:34763427-34763260 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 556-705 |
| Cow position: | chr9:36587281-36587128 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 562-709 |
| Cow position: | chr9:12183171-12183319 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 26 |
| Conread position: | 568-708 |
| Cow position: | chr9:45140339-45140485 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 67 |
Show alignments to all cow chromosomes.