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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010203D03.5
        

               
Conread position:
               
232-438
               

               
Cow position:
               
chr10:59151850-59152058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
241-438
               

               
Cow position:
               
chr10:19094651-19094452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
242-431
               

               
Cow position:
               
chr10:35767082-35767272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
121, 55
               

               
Conread position:
               
243-409
               

               
Cow position:
               
chr10:62286560-62286386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
243-424
               

               
Cow position:
               
chr10:57457337-57457154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
244-424
               

               
Cow position:
               
chr10:15318885-15318702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 135
               

               
Conread position:
               
244-429
               

               
Cow position:
               
chr10:9445021-9445200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
118, 12
               

               
Conread position:
               
244-442
               

               
Cow position:
               
chr10:21082383-21082186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
244-448
               

               
Cow position:
               
chr10:42745918-42745708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
244-461
               

               
Cow position:
               
chr10:40737996-40737785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
249-411
               

               
Cow position:
               
chr10:3985424-3985259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 131
               

               
Conread position:
               
254-450
               

               
Cow position:
               
chr10:19402928-19402728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
257-438
               

               
Cow position:
               
chr10:59663987-59664167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
264-429
               

               
Cow position:
               
chr10:19394610-19394770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
268-438
               

               
Cow position:
               
chr10:47412128-47412299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
268-449
               

               
Cow position:
               
chr10:65423927-65424107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
269-392
               

               
Cow position:
               
chr10:29090716-29090845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
269-403
               

               
Cow position:
               
chr10:2538071-2537934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
269-409
               

               
Cow position:
               
chr10:42312878-42312740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
269-410
               

               
Cow position:
               
chr10:43508966-43508823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
269-411
               

               
Cow position:
               
chr10:37444242-37444390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
269-411
               

               
Cow position:
               
chr10:56733009-56732868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 75
               

               
Conread position:
               
269-417
               

               
Cow position:
               
chr10:2202146-2202298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 112
               

               
Conread position:
               
269-420
               

               
Cow position:
               
chr10:60032594-60032752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
269-422
               

               
Cow position:
               
chr10:41254595-41254750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
269-422
               

               
Cow position:
               
chr10:57461332-57461178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 115
               

               
Conread position:
               
269-423
               

               
Cow position:
               
chr10:10720697-10720853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
269-423
               

               
Cow position:
               
chr10:25699625-25699472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
269-423
               

               
Cow position:
               
chr10:48462364-48462519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
269-423
               

               
Cow position:
               
chr10:61588287-61588443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
269-423
               

               
Cow position:
               
chr10:68927127-68926975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:2974113-2974263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:11463689-11463848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:17176011-17175853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:19372361-19372516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:20132553-20132710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:24753122-24752974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:29070132-29069980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:39303872-39304032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:42892991-42893146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:45658121-45657963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:51313976-51313819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:52046841-52046681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 147
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:54848757-54848595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:54948162-54948319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr10:59164122-59164276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
269-426
               

               
Cow position:
               
chr10:48388295-48388451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
269-428
               

               
Cow position:
               
chr10:41941600-41941762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr10:1976338-1976507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr10:6986423-6986262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr10:9798218-9798384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 114
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr10:19104196-19104359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr10:20372149-20372314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr10:22049236-22049069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr10:24561012-24561171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr10:29339412-29339571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr10:52113693-52113856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr10:58557171-58557009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
269-430
               

               
Cow position:
               
chr10:40420869-40421029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
269-430
               

               
Cow position:
               
chr10:50183068-50183236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 115
               

               
Conread position:
               
269-435
               

               
Cow position:
               
chr10:12315132-12314963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:3998881-3998714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:15293241-15293080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:17983159-17982988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:20735677-20735513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:27749648-27749484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:29588864-29589035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
93, 64
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:32093781-32093608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:35857086-35857249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:35904850-35905019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:37709056-37709228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:37822754-37822918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:45379029-45379199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 110
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:50200687-50200516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr10:66194327-66194499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
269-442
               

               
Cow position:
               
chr10:4184171-4183992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
269-443
               

               
Cow position:
               
chr10:32834794-32834617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
106, 83
               

               
Conread position:
               
269-444
               

               
Cow position:
               
chr10:24871140-24870964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 109
               

               
Conread position:
               
269-445
               

               
Cow position:
               
chr10:31779293-31779473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
269-447
               

               
Cow position:
               
chr10:24276756-24276936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 114
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:2304407-2304583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:6516206-6516391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:12486240-12486062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:18042155-18041980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:20095736-20095549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:31266357-31266533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:31791283-31791464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:33732891-33733074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:37668180-37668366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:43438851-43438665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 175
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:45371032-45370850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 115
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:46493019-46493208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 173
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr10:64878014-64878200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
269-449
               

               
Cow position:
               
chr10:721279-721093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
269-449
               

               
Cow position:
               
chr10:19895374-19895193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
269-449
               

               
Cow position:
               
chr10:35778925-35779111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
269-450
               

               
Cow position:
               
chr10:14975819-14976003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
269-450
               

               
Cow position:
               
chr10:36002175-36001993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
269-450
               

               
Cow position:
               
chr10:64285819-64286003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
269-451
               

               
Cow position:
               
chr10:24781164-24780978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
269-453
               

               
Cow position:
               
chr10:24548234-24548048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
269-453
               

               
Cow position:
               
chr10:61839572-61839389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
269-459
               

               
Cow position:
               
chr10:15462467-15462273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 110
               

               
Conread position:
               
269-474
               

               
Cow position:
               
chr10:54477078-54476877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
270-417
               

               
Cow position:
               
chr10:4164244-4164093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
270-424
               

               
Cow position:
               
chr10:2613343-2613185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
270-424
               

               
Cow position:
               
chr10:37528630-37528787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
270-429
               

               
Cow position:
               
chr10:747444-747278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
270-438
               

               
Cow position:
               
chr10:24096398-24096570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
270-438
               

               
Cow position:
               
chr10:33891109-33891282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 146
               

               
Conread position:
               
270-438
               

               
Cow position:
               
chr10:35862253-35862421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
270-438
               

               
Cow position:
               
chr10:52569566-52569397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 163
               

               
Conread position:
               
270-448
               

               
Cow position:
               
chr10:38513151-38512969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
270-448
               

               
Cow position:
               
chr10:62219807-62219619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
29, 169
               

               
Conread position:
               
271-416
               

               
Cow position:
               
chr10:60237120-60237267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
271-421
               

               
Cow position:
               
chr10:45965473-45965322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
271-424
               

               
Cow position:
               
chr10:15817818-15817974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
271-426
               

               
Cow position:
               
chr10:19549514-19549672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
271-427
               

               
Cow position:
               
chr10:4109562-4109408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
271-429
               

               
Cow position:
               
chr10:47165842-47165684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
271-429
               

               
Cow position:
               
chr10:57059307-57059468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
271-438
               

               
Cow position:
               
chr10:22616666-22616833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
271-438
               

               
Cow position:
               
chr10:24312913-24313084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 166
               

               
Conread position:
               
271-438
               

               
Cow position:
               
chr10:63276367-63276195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 166
               

               
Conread position:
               
271-445
               

               
Cow position:
               
chr10:28105106-28105283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
271-448
               

               
Cow position:
               
chr10:5543275-5543454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
160, 92
               

               
Conread position:
               
271-448
               

               
Cow position:
               
chr10:25045715-25045893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
271-448
               

               
Cow position:
               
chr10:56475439-56475264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
90, 107
               

               
Conread position:
               
272-429
               

               
Cow position:
               
chr10:24375522-24375366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
272-438
               

               
Cow position:
               
chr10:37287199-37287368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
272-438
               

               
Cow position:
               
chr10:60960907-60960745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
273-424
               

               
Cow position:
               
chr10:37529292-37529447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
273-438
               

               
Cow position:
               
chr10:24132848-24133012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
276-429
               

               
Cow position:
               
chr10:25882386-25882239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
276-445
               

               
Cow position:
               
chr10:15871907-15872074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
276-448
               

               
Cow position:
               
chr10:33867422-33867586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
277-446
               

               
Cow position:
               
chr10:30523095-30523269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 162
               

               
Conread position:
               
278-429
               

               
Cow position:
               
chr10:34554125-34554275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
279-418
               

               
Cow position:
               
chr10:65000142-65000286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
279-424
               

               
Cow position:
               
chr10:24871856-24871707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
279-430
               

               
Cow position:
               
chr10:40906284-40906127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 130
               

               
Conread position:
               
279-438
               

               
Cow position:
               
chr10:1201902-1201740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
279-438
               

               
Cow position:
               
chr10:1719559-1719719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
279-450
               

               
Cow position:
               
chr10:59839319-59839492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
284-410
               

               
Cow position:
               
chr10:48500060-48499936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
284-438
               

               
Cow position:
               
chr10:888885-888731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
284-438
               

               
Cow position:
               
chr10:29279404-29279247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
284-438
               

               
Cow position:
               
chr10:50134845-50135002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
289-424
               

               
Cow position:
               
chr10:22341523-22341387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
289-424
               

               
Cow position:
               
chr10:37235598-37235731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
289-429
               

               
Cow position:
               
chr10:13311686-13311549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
290-448
               

               
Cow position:
               
chr10:53248056-53248218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
72, 146
               

               
Conread position:
               
291-437
               

               
Cow position:
               
chr10:24755472-24755619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
294-429
               

               
Cow position:
               
chr10:10753105-10753245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
294-450
               

               
Cow position:
               
chr10:20505489-20505332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
294-450
               

               
Cow position:
               
chr10:21462188-21462031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
299-439
               

               
Cow position:
               
chr10:62293945-62293803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
65, 135
               

               
Conread position:
               
300-423
               

               
Cow position:
               
chr10:4484611-4484486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
300-438
               

               
Cow position:
               
chr10:16740112-16740252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
300-438
               

               
Cow position:
               
chr10:24786049-24785908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
300-444
               

               
Cow position:
               
chr10:48377697-48377842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
301-474
               

               
Cow position:
               
chr10:10048627-10048447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
302-438
               

               
Cow position:
               
chr10:29211900-29211767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
302-438
               

               
Cow position:
               
chr10:54936169-54936307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
412-696
               

               
Cow position:
               
chr10:22979881-22979598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
422-729
               

               
Cow position:
               
chr10:30459636-30459327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
137, 99
               

               
Conread position:
               
455-688
               

               
Cow position:
               
chr10:17866437-17866202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
455-701
               

               
Cow position:
               
chr10:17132150-17132401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
458-640
               

               
Cow position:
               
chr10:20951058-20951244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
458-657
               

               
Cow position:
               
chr10:27782133-27781933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 160
               

               
Conread position:
               
458-674
               

               
Cow position:
               
chr10:28718300-28718510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
458-688
               

               
Cow position:
               
chr10:7583386-7583161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
458-701
               

               
Cow position:
               
chr10:25875346-25875596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 175
               

               
Conread position:
               
458-706
               

               
Cow position:
               
chr10:17403371-17403124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
460-657
               

               
Cow position:
               
chr10:7652974-7653172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
461-698
               

               
Cow position:
               
chr10:4402514-4402759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
78, 47
               

               
Conread position:
               
467-695
               

               
Cow position:
               
chr10:6811976-6811748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
467-697
               

               
Cow position:
               
chr10:34181856-34181625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
467-705
               

               
Cow position:
               
chr10:625905-626149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
469-685
               

               
Cow position:
               
chr10:28051684-28051467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 123
               

               
Conread position:
               
469-696
               

               
Cow position:
               
chr10:21695607-21695383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
469-696
               

               
Cow position:
               
chr10:25544888-25544658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
60, 109
               

               
Conread position:
               
469-701
               

               
Cow position:
               
chr10:24544347-24544591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
469-703
               

               
Cow position:
               
chr10:55641297-55641535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
471-657
               

               
Cow position:
               
chr10:60937466-60937656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
471-680
               

               
Cow position:
               
chr10:46064534-46064741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
471-684
               

               
Cow position:
               
chr10:64562826-64563044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
471-688
               

               
Cow position:
               
chr10:79187-78964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 140
               

               
Conread position:
               
471-693
               

               
Cow position:
               
chr10:51728720-51728497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
471-695
               

               
Cow position:
               
chr10:59519766-59519985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
184, 105
               

               
Conread position:
               
471-696
               

               
Cow position:
               
chr10:43342896-43342666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
471-701
               

               
Cow position:
               
chr10:7230337-7230109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
56, 132
               

               
Conread position:
               
473-705
               

               
Cow position:
               
chr10:35114817-35115049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
476-660
               

               
Cow position:
               
chr10:28999476-28999658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
476-673
               

               
Cow position:
               
chr10:57295505-57295304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 186
               

               
Conread position:
               
476-683
               

               
Cow position:
               
chr10:30438815-30438603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
476-683
               

               
Cow position:
               
chr10:41230517-41230727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
476-684
               

               
Cow position:
               
chr10:13162409-13162200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
476-689
               

               
Cow position:
               
chr10:8664981-8664764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 126
               

               
Conread position:
               
476-690
               

               
Cow position:
               
chr10:18653697-18653469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
476-690
               

               
Cow position:
               
chr10:22985478-22985273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
476-690
               

               
Cow position:
               
chr10:29185419-29185634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
476-696
               

               
Cow position:
               
chr10:58705990-58705768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
476-706
               

               
Cow position:
               
chr10:6043457-6043691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 171
               

               
Conread position:
               
476-706
               

               
Cow position:
               
chr10:6473300-6473535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 189
               

               
Conread position:
               
476-707
               

               
Cow position:
               
chr10:54826243-54826012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 201
               

               
Conread position:
               
476-708
               

               
Cow position:
               
chr10:57744165-57744399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
477-689
               

               
Cow position:
               
chr10:2529816-2530030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 168
               

               
Conread position:
               
477-695
               

               
Cow position:
               
chr10:53177397-53177183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
477-711
               

               
Cow position:
               
chr10:9655617-9655854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 165
               

               
Conread position:
               
480-683
               

               
Cow position:
               
chr10:10910420-10910211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
480-690
               

               
Cow position:
               
chr10:32454789-32454581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
480-693
               

               
Cow position:
               
chr10:57091729-57091946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 131
               

               
Conread position:
               
480-705
               

               
Cow position:
               
chr10:39151500-39151280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
223, 48
               

               
Conread position:
               
480-705
               

               
Cow position:
               
chr10:59407601-59407830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
481-684
               

               
Cow position:
               
chr10:9622117-9621908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
481-684
               

               
Cow position:
               
chr10:68267721-68267926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
481-701
               

               
Cow position:
               
chr10:45507744-45507525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
481-706
               

               
Cow position:
               
chr10:7121960-7122189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 214
               

               
Conread position:
               
482-698
               

               
Cow position:
               
chr10:34821210-34821429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
483-690
               

               
Cow position:
               
chr10:1387341-1387548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
484-677
               

               
Cow position:
               
chr10:36505808-36505618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
484-692
               

               
Cow position:
               
chr10:7476321-7476107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
43, 129
               

               
Conread position:
               
485-672
               

               
Cow position:
               
chr10:27173716-27173523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
485-706
               

               
Cow position:
               
chr10:29795227-29795447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
135, 166
               

               
Conread position:
               
488-673
               

               
Cow position:
               
chr10:23690443-23690633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
37, 129
               

               
Conread position:
               
488-678
               

               
Cow position:
               
chr10:57023980-57024164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
488-704
               

               
Cow position:
               
chr10:51723863-51724086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
488-706
               

               
Cow position:
               
chr10:67498041-67498265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
489-706
               

               
Cow position:
               
chr10:54400950-54401169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
490-696
               

               
Cow position:
               
chr10:39248646-39248438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 132
               

               
Conread position:
               
493-695
               

               
Cow position:
               
chr10:35305260-35305458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
496-692
               

               
Cow position:
               
chr10:25012759-25012569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
496-704
               

               
Cow position:
               
chr10:25911354-25911567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
497-695
               

               
Cow position:
               
chr10:13924244-13924442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
499-698
               

               
Cow position:
               
chr10:34321298-34321495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
507-705
               

               
Cow position:
               
chr10:8402074-8401880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
508-696
               

               
Cow position:
               
chr10:4019531-4019719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
522-696
               

               
Cow position:
               
chr10:34425451-34425276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
526-702
               

               
Cow position:
               
chr10:36582436-36582257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
527-696
               

               
Cow position:
               
chr10:54123886-54124055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
528-684
               

               
Cow position:
               
chr10:58114698-58114850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
528-690
               

               
Cow position:
               
chr10:919803-919640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
528-692
               

               
Cow position:
               
chr10:62041529-62041368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
528-696
               

               
Cow position:
               
chr10:2230750-2230587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
530-690
               

               
Cow position:
               
chr10:4558035-4557878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
530-692
               

               
Cow position:
               
chr10:20200498-20200341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
530-695
               

               
Cow position:
               
chr10:25903345-25903508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
530-705
               

               
Cow position:
               
chr10:6271982-6272156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
92, 76
               

               
Conread position:
               
530-706
               

               
Cow position:
               
chr10:7243613-7243436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
531-698
               

               
Cow position:
               
chr10:28810836-28810670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
531-701
               

               
Cow position:
               
chr10:23455029-23454862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
531-704
               

               
Cow position:
               
chr10:15830798-15830624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
531-729
               

               
Cow position:
               
chr10:22286961-22287161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
536-680
               

               
Cow position:
               
chr10:28993519-28993375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
536-681
               

               
Cow position:
               
chr10:55337959-55337815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
539-684
               

               
Cow position:
               
chr10:52118045-52118189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
545-689
               

               
Cow position:
               
chr10:55532749-55532896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
545-695
               

               
Cow position:
               
chr10:48300685-48300834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
548-706
               

               
Cow position:
               
chr10:53792312-53792153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
551-696
               

               
Cow position:
               
chr10:32933897-32934042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
551-716
               

               
Cow position:
               
chr10:3348573-3348739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
149, 39
               

               
Conread position:
               
557-701
               

               
Cow position:
               
chr10:48028259-48028403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
561-694
               

               
Cow position:
               
chr10:16544354-16544221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
561-695
               

               
Cow position:
               
chr10:61506897-61507027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
561-706
               

               
Cow position:
               
chr10:43564346-43564203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
121, 100
               

               
Conread position:
               
576-706
               

               
Cow position:
               
chr10:6234580-6234450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
127, 57
               

               
Conread position:
               
590-701
               

               
Cow position:
               
chr10:46391204-46391093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.