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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010203D03.5
        

               
Conread position:
               
234-459
               

               
Cow position:
               
chr15:15708059-15707827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
73, 147
               

               
Conread position:
               
243-404
               

               
Cow position:
               
chr15:4418338-4418174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
244-437
               

               
Cow position:
               
chr15:11995962-11995767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 135
               

               
Conread position:
               
244-448
               

               
Cow position:
               
chr15:5234936-5234734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
120, 91
               

               
Conread position:
               
256-429
               

               
Cow position:
               
chr15:34140061-34140229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
256-448
               

               
Cow position:
               
chr15:21941769-21941575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
42, 99
               

               
Conread position:
               
257-438
               

               
Cow position:
               
chr15:5498956-5498769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 183
               

               
Conread position:
               
268-426
               

               
Cow position:
               
chr15:22531752-22531905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
269-396
               

               
Cow position:
               
chr15:36725088-36724961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
269-404
               

               
Cow position:
               
chr15:6331949-6331816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
269-404
               

               
Cow position:
               
chr15:51632947-51632812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
269-405
               

               
Cow position:
               
chr15:49274043-49274179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
269-407
               

               
Cow position:
               
chr15:53402901-53402766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
269-408
               

               
Cow position:
               
chr15:9107124-9107267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 111
               

               
Conread position:
               
269-409
               

               
Cow position:
               
chr15:10088409-10088551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
269-411
               

               
Cow position:
               
chr15:13684178-13684033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
269-411
               

               
Cow position:
               
chr15:39599533-39599675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
269-416
               

               
Cow position:
               
chr15:20422692-20422540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
269-419
               

               
Cow position:
               
chr15:35112792-35112636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
269-420
               

               
Cow position:
               
chr15:12870774-12870617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
68, 64
               

               
Conread position:
               
269-422
               

               
Cow position:
               
chr15:5632776-5632923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
269-423
               

               
Cow position:
               
chr15:20351922-20352075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
269-423
               

               
Cow position:
               
chr15:23696821-23696665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr15:1083286-1083129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr15:1330013-1329856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr15:9871327-9871167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr15:12441735-12441578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr15:16904720-16904874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr15:16936758-16936597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 153
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr15:17100620-17100463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr15:608236-608398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr15:21522876-21523039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr15:26911986-26911829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr15:36773608-36773446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr15:44658449-44658609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 32
               

               
Conread position:
               
269-432
               

               
Cow position:
               
chr15:11559265-11559102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
269-434
               

               
Cow position:
               
chr15:10608216-10608049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
269-435
               

               
Cow position:
               
chr15:19119521-19119345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
269-437
               

               
Cow position:
               
chr15:16657581-16657752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 166
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:225714-225548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:794931-794757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 123
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:12316016-12316184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 110
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:16603909-16604082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:16639876-16640040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:20725527-20725358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:21421027-21421203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
29, 170
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:26919185-26919018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:37381714-37381887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:40999981-40999809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:43914001-43913828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:45584818-45584981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:46611022-46611184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:50322684-50322855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:50957710-50957539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr15:52740036-52739861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
269-439
               

               
Cow position:
               
chr15:5535842-5536015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 151
               

               
Conread position:
               
269-441
               

               
Cow position:
               
chr15:5726415-5726589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
269-445
               

               
Cow position:
               
chr15:22939235-22939057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
269-447
               

               
Cow position:
               
chr15:13387166-13387348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr15:17233283-17233464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr15:20459216-20459030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 170
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr15:21389077-21388895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr15:32324118-32323935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr15:35642110-35642290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr15:39598332-39598514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr15:40009564-40009380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr15:44640987-44641168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
269-450
               

               
Cow position:
               
chr15:21893868-21894054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
269-450
               

               
Cow position:
               
chr15:22751542-22751723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
269-450
               

               
Cow position:
               
chr15:23768167-23767990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
269-450
               

               
Cow position:
               
chr15:27973127-27972940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
269-474
               

               
Cow position:
               
chr15:27280961-27281164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
270-418
               

               
Cow position:
               
chr15:23114927-23115084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
270-421
               

               
Cow position:
               
chr15:11560424-11560268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
270-422
               

               
Cow position:
               
chr15:16018127-16018279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
104, 94
               

               
Conread position:
               
270-431
               

               
Cow position:
               
chr15:6970078-6970237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
270-438
               

               
Cow position:
               
chr15:15881017-15881191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 168
               

               
Conread position:
               
270-438
               

               
Cow position:
               
chr15:20472457-20472289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
270-438
               

               
Cow position:
               
chr15:41620100-41619927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
270-448
               

               
Cow position:
               
chr15:33284968-33285152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
270-450
               

               
Cow position:
               
chr15:22136774-22136954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
270-459
               

               
Cow position:
               
chr15:22095215-22095412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
271-424
               

               
Cow position:
               
chr15:36782233-36782081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
91, 63
               

               
Conread position:
               
271-429
               

               
Cow position:
               
chr15:40798335-40798177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 40
               

               
Conread position:
               
271-429
               

               
Cow position:
               
chr15:47280047-47279888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
271-438
               

               
Cow position:
               
chr15:11646400-11646228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
271-448
               

               
Cow position:
               
chr15:19771224-19771402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
271-450
               

               
Cow position:
               
chr15:11363084-11362907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
272-389
               

               
Cow position:
               
chr15:5717803-5717922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
272-448
               

               
Cow position:
               
chr15:34145061-34144885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
273-435
               

               
Cow position:
               
chr15:10845813-10845979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 163
               

               
Conread position:
               
277-449
               

               
Cow position:
               
chr15:20370363-20370189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
279-409
               

               
Cow position:
               
chr15:13554453-13554586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 100
               

               
Conread position:
               
279-438
               

               
Cow position:
               
chr15:23572587-23572419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
279-447
               

               
Cow position:
               
chr15:2968436-2968602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
284-437
               

               
Cow position:
               
chr15:12723194-12723346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
285-438
               

               
Cow position:
               
chr15:41583015-41583170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
286-429
               

               
Cow position:
               
chr15:1804227-1804080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
288-438
               

               
Cow position:
               
chr15:31857696-31857848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
289-423
               

               
Cow position:
               
chr15:38883263-38883398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
289-424
               

               
Cow position:
               
chr15:22532348-22532484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
292-438
               

               
Cow position:
               
chr15:25584973-25584833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
297-448
               

               
Cow position:
               
chr15:4535029-4535177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
299-412
               

               
Cow position:
               
chr15:23180557-23180672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
300-448
               

               
Cow position:
               
chr15:7827916-7827770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
302-424
               

               
Cow position:
               
chr15:5071975-5071853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
302-429
               

               
Cow position:
               
chr15:5571515-5571384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
305-447
               

               
Cow position:
               
chr15:14020599-14020741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
310-450
               

               
Cow position:
               
chr15:19403112-19403253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
314-438
               

               
Cow position:
               
chr15:9062460-9062338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
67, 8
               

               
Conread position:
               
433-701
               

               
Cow position:
               
chr15:9971276-9971548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
454-672
               

               
Cow position:
               
chr15:24004298-24004082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 128
               

               
Conread position:
               
455-692
               

               
Cow position:
               
chr15:34077498-34077735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 171
               

               
Conread position:
               
458-684
               

               
Cow position:
               
chr15:911230-911000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 160
               

               
Conread position:
               
458-688
               

               
Cow position:
               
chr15:33219342-33219105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 209
               

               
Conread position:
               
458-690
               

               
Cow position:
               
chr15:15364286-15364044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
458-704
               

               
Cow position:
               
chr15:199509-199278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
466-690
               

               
Cow position:
               
chr15:10280755-10280521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
60, 217
               

               
Conread position:
               
467-683
               

               
Cow position:
               
chr15:22619879-22620097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
49, 84
               

               
Conread position:
               
467-695
               

               
Cow position:
               
chr15:20432820-20433054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
467-707
               

               
Cow position:
               
chr15:17695225-17695453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
468-696
               

               
Cow position:
               
chr15:38099661-38099889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
469-659
               

               
Cow position:
               
chr15:40629754-40629558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
469-679
               

               
Cow position:
               
chr15:9038324-9038110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
469-690
               

               
Cow position:
               
chr15:38323864-38324092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
469-696
               

               
Cow position:
               
chr15:19694506-19694274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
469-696
               

               
Cow position:
               
chr15:31885948-31885709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
60, 139
               

               
Conread position:
               
471-685
               

               
Cow position:
               
chr15:23785078-23784878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
471-692
               

               
Cow position:
               
chr15:22564729-22564505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
471-701
               

               
Cow position:
               
chr15:33706078-33705844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
44, 219
               

               
Conread position:
               
472-705
               

               
Cow position:
               
chr15:38349630-38349390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 173
               

               
Conread position:
               
476-677
               

               
Cow position:
               
chr15:30709099-30709306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
476-681
               

               
Cow position:
               
chr15:25442751-25442542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 125
               

               
Conread position:
               
476-682
               

               
Cow position:
               
chr15:25121052-25120842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
476-695
               

               
Cow position:
               
chr15:9439175-9439397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 157
               

               
Conread position:
               
476-695
               

               
Cow position:
               
chr15:41402472-41402251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
476-695
               

               
Cow position:
               
chr15:48683962-48684179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
476-696
               

               
Cow position:
               
chr15:32907415-32907188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
45, 137
               

               
Conread position:
               
476-697
               

               
Cow position:
               
chr15:7446910-7446688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
476-698
               

               
Cow position:
               
chr15:46055270-46055491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
476-701
               

               
Cow position:
               
chr15:15171139-15171369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
476-706
               

               
Cow position:
               
chr15:23914033-23914268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 102
               

               
Conread position:
               
477-706
               

               
Cow position:
               
chr15:48413311-48413084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
478-677
               

               
Cow position:
               
chr15:14985127-14985328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
480-692
               

               
Cow position:
               
chr15:14975734-14975943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
481-680
               

               
Cow position:
               
chr15:24639615-24639819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
481-692
               

               
Cow position:
               
chr15:26660566-26660352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
483-675
               

               
Cow position:
               
chr15:33432182-33432369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 39
               

               
Conread position:
               
484-688
               

               
Cow position:
               
chr15:6283196-6283402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
484-689
               

               
Cow position:
               
chr15:13896549-13896759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
484-701
               

               
Cow position:
               
chr15:24545185-24544967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
486-671
               

               
Cow position:
               
chr15:9076671-9076858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 98
               

               
Conread position:
               
488-739
               

               
Cow position:
               
chr15:5883733-5883990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 246
               

               
Conread position:
               
507-700
               

               
Cow position:
               
chr15:14101211-14101025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
526-692
               

               
Cow position:
               
chr15:11835235-11835400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
528-688
               

               
Cow position:
               
chr15:25738398-25738241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
528-690
               

               
Cow position:
               
chr15:24911290-24911449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
528-694
               

               
Cow position:
               
chr15:22971940-22971774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
530-692
               

               
Cow position:
               
chr15:25067621-25067782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
531-679
               

               
Cow position:
               
chr15:48291216-48291068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
531-689
               

               
Cow position:
               
chr15:7250114-7250270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
531-695
               

               
Cow position:
               
chr15:18688027-18688192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
531-701
               

               
Cow position:
               
chr15:17674391-17674561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
531-701
               

               
Cow position:
               
chr15:34717633-34717800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
531-705
               

               
Cow position:
               
chr15:15838705-15838879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
171, 111
               

               
Conread position:
               
531-706
               

               
Cow position:
               
chr15:30438938-30439112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
167, 73
               

               
Conread position:
               
531-706
               

               
Cow position:
               
chr15:48044473-48044648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
162, 134
               

               
Conread position:
               
532-706
               

               
Cow position:
               
chr15:33960702-33960528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
160, 129
               

               
Conread position:
               
534-681
               

               
Cow position:
               
chr15:9973956-9974104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 99
               

               
Conread position:
               
534-706
               

               
Cow position:
               
chr15:34956670-34956848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 172
               

               
Conread position:
               
535-696
               

               
Cow position:
               
chr15:26315095-26314935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
538-701
               

               
Cow position:
               
chr15:22965410-22965572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
548-674
               

               
Cow position:
               
chr15:42130064-42129941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
551-692
               

               
Cow position:
               
chr15:42171841-42171701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
551-709
               

               
Cow position:
               
chr15:34269338-34269183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
151, 110
               

               
Conread position:
               
552-690
               

               
Cow position:
               
chr15:49201524-49201658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
554-690
               

               
Cow position:
               
chr15:34215478-34215614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
563-691
               

               
Cow position:
               
chr15:29671068-29671196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.