Cow genome map

Conread name: Ss1.1-Thy1-THY010203D03.5

Conread position: 241-438
Cow position: chr17:24821930-24821736 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 68

Conread position: 244-424
Cow position: chr17:20932398-20932212 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 11, 138

Conread position: 244-429
Cow position: chr17:14033575-14033762 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 41

Conread position: 244-438
Cow position: chr17:30665337-30665146 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 166

Conread position: 244-450
Cow position: chr17:27058492-27058695 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 93, 60

Conread position: 244-459
Cow position: chr17:28540095-28539876 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 135

Conread position: 247-424
Cow position: chr17:5895846-5896027 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 143

Conread position: 257-438
Cow position: chr17:16371308-16371125 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 49

Conread position: 260-450
Cow position: chr17:4721542-4721342 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 12

Conread position: 268-422
Cow position: chr17:4786456-4786609 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 34

Conread position: 268-424
Cow position: chr17:11056328-11056488 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 123

Conread position: 268-429
Cow position: chr17:20884564-20884401 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 111

Conread position: 269-399
Cow position: chr17:21489583-21489716 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 110

Conread position: 269-402
Cow position: chr17:27203006-27203139 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 30

Conread position: 269-404
Cow position: chr17:20306090-20305951 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 66

Conread position: 269-404
Cow position: chr17:42347184-42347321 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 56

Conread position: 269-411
Cow position: chr17:17266851-17266998 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 112

Conread position: 269-420
Cow position: chr17:11215190-11215342 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 94

Conread position: 269-421
Cow position: chr17:10458896-10459051 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 32, 120

Conread position: 269-422
Cow position: chr17:25122368-25122523 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 53

Conread position: 269-423
Cow position: chr17:1295531-1295687 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 93, 31

Conread position: 269-423
Cow position: chr17:2034569-2034422 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 269-423
Cow position: chr17:42419760-42419607 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 59

Conread position: 269-424
Cow position: chr17:267545-267705 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 35, 58

Conread position: 269-424
Cow position: chr17:8690401-8690559 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 110

Conread position: 269-424
Cow position: chr17:9117684-9117530 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 29

Conread position: 269-424
Cow position: chr17:11171833-11171682 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 11

Conread position: 269-424
Cow position: chr17:30734254-30734409 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 95, 8

Conread position: 269-424
Cow position: chr17:31856713-31856546 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 269-424
Cow position: chr17:35311467-35311309 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 65

Conread position: 269-424
Cow position: chr17:41289982-41290137 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 33, 66

Conread position: 269-429
Cow position: chr17:923919-923756 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 50

Conread position: 269-429
Cow position: chr17:9565347-9565187 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 65

Conread position: 269-429
Cow position: chr17:15664717-15664546 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 269-429
Cow position: chr17:27183901-27184062 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 70

Conread position: 269-430
Cow position: chr17:9854024-9853867 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 28

Conread position: 269-430
Cow position: chr17:21910881-21911043 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 109

Conread position: 269-434
Cow position: chr17:7654412-7654579 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 114

Conread position: 269-437
Cow position: chr17:6848837-6848676 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 24

Conread position: 269-438
Cow position: chr17:1035557-1035731 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 168

Conread position: 269-438
Cow position: chr17:1113928-1113755 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 93, 41

Conread position: 269-438
Cow position: chr17:1783564-1783735 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 78

Conread position: 269-438
Cow position: chr17:6329155-6328982 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 167

Conread position: 269-438
Cow position: chr17:6624296-6624128 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 95, 66

Conread position: 269-438
Cow position: chr17:9778283-9778116 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 95, 27

Conread position: 269-438
Cow position: chr17:11156453-11156619 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 30

Conread position: 269-438
Cow position: chr17:11618628-11618454 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 135

Conread position: 269-438
Cow position: chr17:12591209-12591037 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 111

Conread position: 269-438
Cow position: chr17:14762082-14762249 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 90, 65

Conread position: 269-438
Cow position: chr17:20780549-20780384 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 31

Conread position: 269-438
Cow position: chr17:20839526-20839691 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 25

Conread position: 269-438
Cow position: chr17:21243747-21243913 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 88

Conread position: 269-438
Cow position: chr17:21738834-21739010 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 170

Conread position: 269-438
Cow position: chr17:24550217-24550044 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 65

Conread position: 269-438
Cow position: chr17:25097502-25097333 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 109

Conread position: 269-438
Cow position: chr17:25815642-25815474 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 82

Conread position: 269-438
Cow position: chr17:26224551-26224391 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 269-438
Cow position: chr17:27048196-27048029 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 90, 29

Conread position: 269-438
Cow position: chr17:32278868-32279033 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 8

Conread position: 269-438
Cow position: chr17:32280704-32280539 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 8

Conread position: 269-439
Cow position: chr17:41029991-41029822 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 68, 30

Conread position: 269-444
Cow position: chr17:31481005-31481172 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 31

Conread position: 269-448
Cow position: chr17:7142901-7142724 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 31

Conread position: 269-448
Cow position: chr17:9746556-9746378 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 111

Conread position: 269-448
Cow position: chr17:12059052-12059231 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 115

Conread position: 269-448
Cow position: chr17:12536425-12536608 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 112

Conread position: 269-448
Cow position: chr17:21312769-21312945 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 111

Conread position: 269-448
Cow position: chr17:31231076-31231255 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 82, 35

Conread position: 269-448
Cow position: chr17:32950315-32950132 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 16

Conread position: 269-450
Cow position: chr17:3471459-3471276 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 40

Conread position: 269-450
Cow position: chr17:18824831-18824648 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 15

Conread position: 269-450
Cow position: chr17:20992997-20993184 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 112

Conread position: 269-450
Cow position: chr17:24580254-24580442 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 112

Conread position: 269-451
Cow position: chr17:18860681-18860862 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 26, 111

Conread position: 269-480
Cow position: chr17:1061017-1061238 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 270-421
Cow position: chr17:33410976-33411136 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 270-424
Cow position: chr17:34595979-34595827 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 40

Conread position: 270-424
Cow position: chr17:44232673-44232832 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 72

Conread position: 270-429
Cow position: chr17:20889411-20889256 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 29

Conread position: 270-429
Cow position: chr17:21959649-21959809 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 34

Conread position: 270-429
Cow position: chr17:26881292-26881455 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 112

Conread position: 270-438
Cow position: chr17:7698090-7697927 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 270-438
Cow position: chr17:18720408-18720583 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 111

Conread position: 270-438
Cow position: chr17:24149223-24149051 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 23, 42

Conread position: 270-438
Cow position: chr17:38614999-38614826 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 122

Conread position: 270-459
Cow position: chr17:21628518-21628321 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 35

Conread position: 271-429
Cow position: chr17:26233792-26233948 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 40

Conread position: 271-429
Cow position: chr17:32027416-32027580 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 6

Conread position: 271-437
Cow position: chr17:27429617-27429453 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 97

Conread position: 271-438
Cow position: chr17:5514798-5514629 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 69

Conread position: 271-441
Cow position: chr17:7803137-7803304 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 40

Conread position: 271-448
Cow position: chr17:5246932-5246755 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 84

Conread position: 271-448
Cow position: chr17:8544342-8544166 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 27

Conread position: 271-448
Cow position: chr17:17410331-17410147 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 124

Conread position: 271-448
Cow position: chr17:40741686-40741507 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 146

Conread position: 271-450
Cow position: chr17:40771874-40771693 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 37, 29

Conread position: 272-422
Cow position: chr17:24559327-24559178 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 38

Conread position: 273-438
Cow position: chr17:13143652-13143820 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 108

Conread position: 273-438
Cow position: chr17:18146221-18146056 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 137

Conread position: 279-424
Cow position: chr17:242668-242519 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 100

Conread position: 279-438
Cow position: chr17:908771-908616 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 26

Conread position: 279-438
Cow position: chr17:37699320-37699488 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 35

Conread position: 279-449
Cow position: chr17:14883052-14883227 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 102

Conread position: 279-450
Cow position: chr17:40792250-40792081 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 39

Conread position: 281-424
Cow position: chr17:21414808-21414952 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 17

Conread position: 281-424
Cow position: chr17:21437291-21437435 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 19

Conread position: 281-429
Cow position: chr17:552934-553079 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 18

Conread position: 281-429
Cow position: chr17:33999022-33999166 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 284-424
Cow position: chr17:21697760-21697619 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 20

Conread position: 284-438
Cow position: chr17:24077432-24077271 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 54

Conread position: 286-438
Cow position: chr17:22781714-22781561 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 93

Conread position: 289-420
Cow position: chr17:21335676-21335807 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 24

Conread position: 289-424
Cow position: chr17:12216053-12216190 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 90

Conread position: 290-446
Cow position: chr17:7132432-7132589 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 88

Conread position: 295-438
Cow position: chr17:22564195-22564051 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 93

Conread position: 300-410
Cow position: chr17:9936031-9936140 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 300-436
Cow position: chr17:11296648-11296511 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 78

Conread position: 302-429
Cow position: chr17:10446925-10446798 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 61

Conread position: 302-438
Cow position: chr17:14060768-14060906 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 87

Conread position: 303-429
Cow position: chr17:32651625-32651494 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 314-448
Cow position: chr17:6566460-6566325 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 32

Conread position: 412-701
Cow position: chr17:31305767-31305475 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 47

Conread position: 455-680
Cow position: chr17:33414403-33414171 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 139

Conread position: 458-706
Cow position: chr17:29274661-29274909 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 19, 43

Conread position: 459-695
Cow position: chr17:31852725-31852958 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 129

Conread position: 459-702
Cow position: chr17:28232714-28232471 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 11, 111

Conread position: 467-692
Cow position: chr17:8704977-8705201 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 59, 20

Conread position: 467-692
Cow position: chr17:38737076-38737303 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 198

Conread position: 469-678
Cow position: chr17:26519567-26519359 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 115

Conread position: 469-690
Cow position: chr17:28183242-28183022 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 23

Conread position: 469-692
Cow position: chr17:41046892-41046663 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 23

Conread position: 469-695
Cow position: chr17:874478-874248 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 170

Conread position: 469-696
Cow position: chr17:32440763-32440990 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 469-701
Cow position: chr17:28224278-28224045 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 115

Conread position: 469-706
Cow position: chr17:26242655-26242414 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 25, 152

Conread position: 471-684
Cow position: chr17:3397896-3397671 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 471-686
Cow position: chr17:30770288-30770079 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 471-694
Cow position: chr17:20700405-20700180 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 56, 92

Conread position: 471-695
Cow position: chr17:35254844-35254619 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 113

Conread position: 471-696
Cow position: chr17:29959368-29959135 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 148

Conread position: 471-706
Cow position: chr17:32500873-32500644 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 472-705
Cow position: chr17:15651018-15651252 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 27

Conread position: 475-707
Cow position: chr17:26619130-26619375 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 52, 233

Conread position: 476-683
Cow position: chr17:30753298-30753086 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 476-689
Cow position: chr17:28140918-28141135 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 171

Conread position: 476-696
Cow position: chr17:20006935-20007157 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 16

Conread position: 476-702
Cow position: chr17:32531050-32530828 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 143, 56

Conread position: 476-704
Cow position: chr17:28209770-28210001 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 136

Conread position: 476-704
Cow position: chr17:28833256-28833487 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 34

Conread position: 476-705
Cow position: chr17:28192501-28192270 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 26

Conread position: 476-705
Cow position: chr17:36207675-36207443 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 173

Conread position: 476-705
Cow position: chr17:42349738-42349510 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 221, 28

Conread position: 476-706
Cow position: chr17:18627980-18628210 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 18

Conread position: 476-706
Cow position: chr17:28169300-28169536 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 51, 136

Conread position: 476-706
Cow position: chr17:33026327-33026562 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 223

Conread position: 476-711
Cow position: chr17:28240514-28240737 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 476-711
Cow position: chr17:28820950-28820712 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 18

Conread position: 476-711
Cow position: chr17:39683138-39682902 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 477-696
Cow position: chr17:30794786-30795008 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 30, 157

Conread position: 477-701
Cow position: chr17:29855145-29854922 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 15

Conread position: 478-692
Cow position: chr17:21183825-21183605 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 48, 122

Conread position: 479-736
Cow position: chr17:26838669-26838405 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 236

Conread position: 480-692
Cow position: chr17:28850040-28849829 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 112

Conread position: 480-695
Cow position: chr17:8803565-8803342 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 162

Conread position: 480-696
Cow position: chr17:31846111-31845887 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 480-696
Cow position: chr17:33269426-33269207 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 139

Conread position: 481-689
Cow position: chr17:26289263-26289474 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 481-696
Cow position: chr17:28068164-28067947 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 481-706
Cow position: chr17:25884421-25884650 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 223

Conread position: 482-695
Cow position: chr17:33880124-33879911 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 205

Conread position: 484-707
Cow position: chr17:38630537-38630762 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 136

Conread position: 487-690
Cow position: chr17:35121679-35121888 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 488-670
Cow position: chr17:28213972-28214148 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 488-701
Cow position: chr17:42488439-42488648 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 112

Conread position: 489-701
Cow position: chr17:36381949-36382165 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 491-701
Cow position: chr17:27562947-27563163 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 494-689
Cow position: chr17:28100814-28100614 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 494-703
Cow position: chr17:28345893-28345682 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 170

Conread position: 507-694
Cow position: chr17:20135028-20134837 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 78

Conread position: 526-701
Cow position: chr17:35575763-35575937 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 528-692
Cow position: chr17:646154-645992 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 528-695
Cow position: chr17:29833045-29832878 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 528-696
Cow position: chr17:27394133-27394298 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 528-698
Cow position: chr17:29130273-29130104 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 158, 0

Conread position: 530-674
Cow position: chr17:31771583-31771727 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 531-694
Cow position: chr17:30151210-30151047 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 531-694
Cow position: chr17:37362850-37362688 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 145

Conread position: 531-696
Cow position: chr17:32421663-32421499 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 531-696
Cow position: chr17:35998303-35998139 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 155, 0

Conread position: 531-701
Cow position: chr17:28893308-28893141 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 531-701
Cow position: chr17:30111173-30111344 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 150, 0

Conread position: 531-704
Cow position: chr17:29095108-29094936 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 162

Conread position: 531-705
Cow position: chr17:3328839-3329008 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 534-701
Cow position: chr17:33270977-33270813 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 534-707
Cow position: chr17:36123598-36123770 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 161

Conread position: 535-701
Cow position: chr17:26367302-26367464 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 536-696
Cow position: chr17:28128761-28128604 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 545-695
Cow position: chr17:38073139-38072991 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 548-696
Cow position: chr17:43623693-43623545 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 548-706
Cow position: chr17:9914908-9915066 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-706
Cow position: chr17:45117198-45117352 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 557-701
Cow position: chr17:35520975-35520834 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 63

Conread position: 561-695
Cow position: chr17:32337602-32337468 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 561-705
Cow position: chr17:26874150-26874005 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 569-696
Cow position: chr17:29453804-29453930 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 577-693
Cow position: chr17:9769827-9769710 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 577-704
Cow position: chr17:28800832-28800958 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 577-707
Cow position: chr17:26476221-26476350 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 584-704
Cow position: chr17:37977115-37976996 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 0

Show alignments to all cow chromosomes.