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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010203D03.5
        

               
Conread position:
               
243-422
               

               
Cow position:
               
chr19:25851474-25851653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
243-422
               

               
Cow position:
               
chr19:25851818-25851997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
243-422
               

               
Cow position:
               
chr19:25864910-25865089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
244-418
               

               
Cow position:
               
chr19:25807287-25807465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
55, 136
               

               
Conread position:
               
244-424
               

               
Cow position:
               
chr19:11424302-11424482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
118, 65
               

               
Conread position:
               
244-424
               

               
Cow position:
               
chr19:38339967-38340149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
244-429
               

               
Cow position:
               
chr19:11443002-11442807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
244-450
               

               
Cow position:
               
chr19:21335592-21335810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
251-438
               

               
Cow position:
               
chr19:33307107-33306918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
111, 183
               

               
Conread position:
               
257-460
               

               
Cow position:
               
chr19:8375310-8375515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
268-404
               

               
Cow position:
               
chr19:53542903-53543041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
268-438
               

               
Cow position:
               
chr19:32457631-32457460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
268-448
               

               
Cow position:
               
chr19:1898248-1898432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
268-450
               

               
Cow position:
               
chr19:36380240-36380051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
269-410
               

               
Cow position:
               
chr19:50682454-50682594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
269-411
               

               
Cow position:
               
chr19:48021645-48021789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 40
               

               
Conread position:
               
269-412
               

               
Cow position:
               
chr19:7404388-7404537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
269-412
               

               
Cow position:
               
chr19:20935742-20935597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
269-419
               

               
Cow position:
               
chr19:21816955-21816798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
269-422
               

               
Cow position:
               
chr19:10232421-10232579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
269-422
               

               
Cow position:
               
chr19:42746349-42746503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
269-422
               

               
Cow position:
               
chr19:47859327-47859482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 110
               

               
Conread position:
               
269-423
               

               
Cow position:
               
chr19:31536115-31535961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
269-423
               

               
Cow position:
               
chr19:40450007-40449847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:1552223-1552062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:6079370-6079530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:6092755-6092600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:6540936-6540782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:11191628-11191787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:14253620-14253469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:17273744-17273898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:32451073-32450913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:38111458-38111303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:43431339-43431491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:46918838-46918677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:47118508-47118664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:53657880-53657728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr19:53840508-53840351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
269-426
               

               
Cow position:
               
chr19:51185412-51185256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
269-426
               

               
Cow position:
               
chr19:56150075-56150240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr19:3246061-3246224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr19:6688011-6688175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr19:19662036-19661872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr19:33116585-33116423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr19:39361128-39360969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr19:42205917-42205761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr19:55394889-55394732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
269-430
               

               
Cow position:
               
chr19:729754-729910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
269-436
               

               
Cow position:
               
chr19:19561504-19561330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
269-437
               

               
Cow position:
               
chr19:42726348-42726180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr19:2734438-2734272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
93, 118
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr19:6531875-6531709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr19:14992936-14993105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr19:15936826-15936660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr19:22134161-22134327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr19:31595289-31595117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 166
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr19:35380564-35380731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr19:38596606-38596437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr19:43058522-43058354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr19:51401022-51401186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr19:56063441-56063616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 125
               

               
Conread position:
               
269-439
               

               
Cow position:
               
chr19:24759894-24760068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
269-443
               

               
Cow position:
               
chr19:39587537-39587716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
269-444
               

               
Cow position:
               
chr19:33469009-33468836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
269-445
               

               
Cow position:
               
chr19:5912968-5913148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 143
               

               
Conread position:
               
269-445
               

               
Cow position:
               
chr19:7884568-7884394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
269-446
               

               
Cow position:
               
chr19:14928668-14928843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
269-447
               

               
Cow position:
               
chr19:2589497-2589315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 166
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr19:19919473-19919654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr19:35622346-35622167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
269-450
               

               
Cow position:
               
chr19:1153204-1153028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
269-450
               

               
Cow position:
               
chr19:6417585-6417401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
269-450
               

               
Cow position:
               
chr19:18788116-18788298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
269-450
               

               
Cow position:
               
chr19:34620040-34620225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 121
               

               
Conread position:
               
269-455
               

               
Cow position:
               
chr19:34425570-34425385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
269-459
               

               
Cow position:
               
chr19:35540283-35540092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
269-474
               

               
Cow position:
               
chr19:15887332-15887545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
269-616
               

               
Cow position:
               
chr19:4329061-4329427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
270-411
               

               
Cow position:
               
chr19:9408674-9408528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
270-424
               

               
Cow position:
               
chr19:4251983-4252139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
270-430
               

               
Cow position:
               
chr19:33912637-33912804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
270-438
               

               
Cow position:
               
chr19:2138117-2138287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
270-438
               

               
Cow position:
               
chr19:31763014-31762846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
270-438
               

               
Cow position:
               
chr19:39661554-39661722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
270-448
               

               
Cow position:
               
chr19:10171993-10171809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 168
               

               
Conread position:
               
270-450
               

               
Cow position:
               
chr19:5433564-5433755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 174
               

               
Conread position:
               
271-438
               

               
Cow position:
               
chr19:25673536-25673701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
271-438
               

               
Cow position:
               
chr19:28014466-28014299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
35, 6
               

               
Conread position:
               
271-438
               

               
Cow position:
               
chr19:33290470-33290304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
271-439
               

               
Cow position:
               
chr19:36125571-36125405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
271-448
               

               
Cow position:
               
chr19:8864735-8864557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 147
               

               
Conread position:
               
272-430
               

               
Cow position:
               
chr19:22799092-22799254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
274-424
               

               
Cow position:
               
chr19:6516254-6516091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
274-448
               

               
Cow position:
               
chr19:3217000-3216823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
281-429
               

               
Cow position:
               
chr19:4537445-4537591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
83, 22
               

               
Conread position:
               
284-438
               

               
Cow position:
               
chr19:53371924-53372078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
287-438
               

               
Cow position:
               
chr19:35782161-35782311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
289-424
               

               
Cow position:
               
chr19:10093260-10093123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
289-424
               

               
Cow position:
               
chr19:39622836-39622967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
289-448
               

               
Cow position:
               
chr19:14347980-14347820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 89
               

               
Conread position:
               
289-448
               

               
Cow position:
               
chr19:16694073-16694237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 147
               

               
Conread position:
               
290-423
               

               
Cow position:
               
chr19:13390879-13390748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
292-429
               

               
Cow position:
               
chr19:24137224-24137088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
300-438
               

               
Cow position:
               
chr19:8839559-8839421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
301-448
               

               
Cow position:
               
chr19:48409466-48409317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
316-449
               

               
Cow position:
               
chr19:25053732-25053869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
452-690
               

               
Cow position:
               
chr19:21242966-21243204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
88, 157
               

               
Conread position:
               
455-689
               

               
Cow position:
               
chr19:39213989-39213753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
455-701
               

               
Cow position:
               
chr19:29134792-29135044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
455-703
               

               
Cow position:
               
chr19:32641233-32641486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 197
               

               
Conread position:
               
456-695
               

               
Cow position:
               
chr19:28934243-28934009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
458-695
               

               
Cow position:
               
chr19:40218204-40217962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
458-705
               

               
Cow position:
               
chr19:7216325-7216071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
459-688
               

               
Cow position:
               
chr19:18720665-18720901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 197
               

               
Conread position:
               
461-692
               

               
Cow position:
               
chr19:27439022-27438788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
467-657
               

               
Cow position:
               
chr19:5175474-5175283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
467-708
               

               
Cow position:
               
chr19:44035668-44035905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
467-719
               

               
Cow position:
               
chr19:41324779-41325031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
469-649
               

               
Cow position:
               
chr19:15042894-15043079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
469-692
               

               
Cow position:
               
chr19:47784406-47784631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 213
               

               
Conread position:
               
469-695
               

               
Cow position:
               
chr19:34269380-34269154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
469-696
               

               
Cow position:
               
chr19:16692283-16692513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 134
               

               
Conread position:
               
469-696
               

               
Cow position:
               
chr19:34419495-34419266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
469-701
               

               
Cow position:
               
chr19:8248203-8247966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
469-706
               

               
Cow position:
               
chr19:36979190-36978959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
471-658
               

               
Cow position:
               
chr19:38736873-38737066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 118
               

               
Conread position:
               
471-678
               

               
Cow position:
               
chr19:11788951-11788739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
471-680
               

               
Cow position:
               
chr19:42993835-42994052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
471-696
               

               
Cow position:
               
chr19:15870271-15870041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
471-702
               

               
Cow position:
               
chr19:12639241-12639478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
471-703
               

               
Cow position:
               
chr19:36705448-36705231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
474-696
               

               
Cow position:
               
chr19:18358050-18357820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
476-672
               

               
Cow position:
               
chr19:30432796-30432998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 139
               

               
Conread position:
               
476-681
               

               
Cow position:
               
chr19:39795598-39795803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
476-685
               

               
Cow position:
               
chr19:10666987-10666770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
476-690
               

               
Cow position:
               
chr19:40365703-40365491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
476-691
               

               
Cow position:
               
chr19:12326623-12326404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
476-696
               

               
Cow position:
               
chr19:14202438-14202212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
476-701
               

               
Cow position:
               
chr19:9396191-9395972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
109, 42
               

               
Conread position:
               
476-701
               

               
Cow position:
               
chr19:13056350-13056123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
476-704
               

               
Cow position:
               
chr19:18951958-18952185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
477-675
               

               
Cow position:
               
chr19:40079201-40079388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
477-681
               

               
Cow position:
               
chr19:19896637-19896843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 197
               

               
Conread position:
               
477-684
               

               
Cow position:
               
chr19:6357664-6357453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
477-701
               

               
Cow position:
               
chr19:28974691-28974919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 161
               

               
Conread position:
               
477-704
               

               
Cow position:
               
chr19:3186546-3186773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 187
               

               
Conread position:
               
480-658
               

               
Cow position:
               
chr19:14726629-14726447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 99
               

               
Conread position:
               
480-689
               

               
Cow position:
               
chr19:18449173-18449376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
480-705
               

               
Cow position:
               
chr19:34049096-34049326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
481-702
               

               
Cow position:
               
chr19:17247571-17247797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 101
               

               
Conread position:
               
482-690
               

               
Cow position:
               
chr19:21254456-21254240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
482-692
               

               
Cow position:
               
chr19:34978212-34978421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
484-659
               

               
Cow position:
               
chr19:33360120-33359943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
484-677
               

               
Cow position:
               
chr19:35569891-35570084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
42, 100
               

               
Conread position:
               
484-690
               

               
Cow position:
               
chr19:5428783-5428576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
484-690
               

               
Cow position:
               
chr19:41281204-41281409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
485-701
               

               
Cow position:
               
chr19:43155750-43155970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
488-695
               

               
Cow position:
               
chr19:18887965-18887757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
488-705
               

               
Cow position:
               
chr19:32416772-32416984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
491-693
               

               
Cow position:
               
chr19:34170400-34170607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
496-684
               

               
Cow position:
               
chr19:42211297-42211106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 115
               

               
Conread position:
               
499-705
               

               
Cow position:
               
chr19:46298624-46298834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
500-701
               

               
Cow position:
               
chr19:51030297-51030094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
503-706
               

               
Cow position:
               
chr19:21712807-21712597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
505-696
               

               
Cow position:
               
chr19:49805365-49805173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
526-690
               

               
Cow position:
               
chr19:44007564-44007725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
526-704
               

               
Cow position:
               
chr19:51042925-51042747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
528-689
               

               
Cow position:
               
chr19:18368488-18368327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
530-682
               

               
Cow position:
               
chr19:8365451-8365300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
531-672
               

               
Cow position:
               
chr19:36997588-36997448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
531-689
               

               
Cow position:
               
chr19:6766396-6766238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
531-695
               

               
Cow position:
               
chr19:46831531-46831694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
531-696
               

               
Cow position:
               
chr19:18023515-18023350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
533-690
               

               
Cow position:
               
chr19:24232080-24232235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 79
               

               
Conread position:
               
534-696
               

               
Cow position:
               
chr19:36782769-36782610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
534-702
               

               
Cow position:
               
chr19:3591508-3591343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
535-705
               

               
Cow position:
               
chr19:20644432-20644600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
545-690
               

               
Cow position:
               
chr19:17316589-17316734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
548-716
               

               
Cow position:
               
chr19:17328162-17327991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
552-691
               

               
Cow position:
               
chr19:41167232-41167369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
552-704
               

               
Cow position:
               
chr19:16843190-16843041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               
Show alignments to all cow chromosomes.