Cow genome map

Conread name: Ss1.1-Thy1-THY010203D03.5

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 214-459
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 93

Conread position: 244-420
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 137

Conread position: 244-424
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 88

Conread position: 244-424
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 57, 138

Conread position: 244-447
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 190

Conread position: 244-448
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 54, 34

Conread position: 244-450
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 54, 33

Conread position: 257-429
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 50

Conread position: 268-448
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 171

Conread position: 269-396
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 109

Conread position: 269-414
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 27

Conread position: 269-420
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 269-422
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 49

Conread position: 269-422
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 124

Conread position: 269-422
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 34

Conread position: 269-422
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 151

Conread position: 269-423
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 109

Conread position: 269-423
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 29, 112

Conread position: 269-424
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 110

Conread position: 269-424
Cow position:
Alignm length: 157
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 32

Conread position: 269-424
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 30

Conread position: 269-424
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 113

Conread position: 269-424
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 20

Conread position: 269-424
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 120

Conread position: 269-424
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 269-429
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 93, 31

Conread position: 269-429
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 109

Conread position: 269-429
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 110

Conread position: 269-429
Cow position:
Alignm length: 163
Alignm identity: 131
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 108

Conread position: 269-429
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 8

Conread position: 269-433
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 112

Conread position: 269-438
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 269-438
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 88, 108

Conread position: 269-438
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 111

Conread position: 269-438
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 35

Conread position: 269-438
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 113

Conread position: 269-438
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 269-438
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 31

Conread position: 269-438
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 26, 46

Conread position: 269-445
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 87

Conread position: 269-448
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 73

Conread position: 269-448
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 94

Conread position: 269-448
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 32

Conread position: 269-448
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 25

Conread position: 269-448
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 106, 35

Conread position: 269-448
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 269-448
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 115

Conread position: 269-448
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 72

Conread position: 269-450
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 124

Conread position: 269-450
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 29

Conread position: 269-450
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 31

Conread position: 269-450
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 35

Conread position: 269-452
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 96, 107

Conread position: 269-455
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 38, 25

Conread position: 269-474
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 117

Conread position: 270-410
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 43

Conread position: 270-423
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 111

Conread position: 270-424
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 270-429
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 54

Conread position: 270-438
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 38

Conread position: 270-448
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 41

Conread position: 270-449
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 132

Conread position: 270-450
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 149

Conread position: 271-429
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 23

Conread position: 271-429
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 109

Conread position: 271-438
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 91, 28

Conread position: 271-438
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 111

Conread position: 271-448
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 27

Conread position: 271-448
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 93, 107

Conread position: 271-448
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 136

Conread position: 271-451
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 152

Conread position: 273-438
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 38

Conread position: 276-438
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 37

Conread position: 278-448
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 24, 53

Conread position: 279-424
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 102

Conread position: 279-426
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 58

Conread position: 280-424
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 280-451
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 122

Conread position: 285-424
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 24

Conread position: 285-438
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 40

Conread position: 289-411
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 87

Conread position: 290-438
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 146

Conread position: 290-438
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 293-429
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 18

Conread position: 294-438
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 15

Conread position: 295-411
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 84

Conread position: 296-448
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 84

Conread position: 299-438
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 79

Conread position: 300-448
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 78

Conread position: 301-446
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 77

Conread position: 421-696
Cow position:
Alignm length: 278
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 66, 24

Conread position: 459-695
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 127

Conread position: 467-701
Cow position:
Alignm length: 243
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 165

Conread position: 469-708
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 23

Conread position: 469-709
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 23

Conread position: 471-683
Cow position:
Alignm length: 222
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 21

Conread position: 471-692
Cow position:
Alignm length: 222
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 476-679
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 122, 59

Conread position: 476-696
Cow position:
Alignm length: 227
Alignm identity: 155
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 101

Conread position: 476-716
Cow position:
Alignm length: 246
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 480-684
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 480-690
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 480-690
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 49, 77

Conread position: 480-701
Cow position:
Alignm length: 227
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 181

Conread position: 481-680
Cow position:
Alignm length: 205
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 482-706
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 177

Conread position: 484-709
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 10

Conread position: 485-684
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 31

Conread position: 485-692
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 192

Conread position: 485-704
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 181

Conread position: 486-696
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 137

Conread position: 488-684
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 490-691
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 88

Conread position: 491-692
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 119

Conread position: 496-705
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 82

Conread position: 497-696
Cow position:
Alignm length: 205
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 168

Conread position: 525-684
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 526-691
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 80

Conread position: 528-683
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 528-707
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 79

Conread position: 530-706
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 168, 0

Conread position: 531-684
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 535-825
Cow position:
Alignm length: 295
Alignm identity: 191
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 79, 162

Conread position: 553-701
Cow position:
Alignm length: 149
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.