Cow genome map

Conread name: Ss1.1-Thy1-THY010203D03.5

Conread position: 232-424
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 93

Conread position: 239-424
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 140

Conread position: 243-450
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 139

Conread position: 244-422
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 57

Conread position: 244-422
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 51

Conread position: 244-424
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 244-424
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 77

Conread position: 244-438
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 151

Conread position: 257-424
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 105, 121

Conread position: 264-421
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 100

Conread position: 268-429
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 98

Conread position: 269-398
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 111

Conread position: 269-409
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 88, 39

Conread position: 269-411
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 62

Conread position: 269-416
Cow position:
Alignm length: 152
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 31

Conread position: 269-423
Cow position:
Alignm length: 158
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 108

Conread position: 269-423
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 31

Conread position: 269-423
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 107, 30

Conread position: 269-424
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 108

Conread position: 269-424
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 78

Conread position: 269-424
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 31

Conread position: 269-424
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 69

Conread position: 269-424
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 41

Conread position: 269-426
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 55

Conread position: 269-429
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 112, 28

Conread position: 269-429
Cow position:
Alignm length: 164
Alignm identity: 131
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 93, 29

Conread position: 269-429
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 93, 108

Conread position: 269-429
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 31

Conread position: 269-429
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 76

Conread position: 269-429
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 94, 31

Conread position: 269-429
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 64

Conread position: 269-431
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 93, 31

Conread position: 269-437
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 120

Conread position: 269-438
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 109

Conread position: 269-438
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 269-438
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 93, 35

Conread position: 269-438
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 85

Conread position: 269-438
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 35

Conread position: 269-438
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 45

Conread position: 269-438
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 93, 63

Conread position: 269-438
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 109

Conread position: 269-438
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 93, 25

Conread position: 269-438
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 113

Conread position: 269-438
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 172

Conread position: 269-444
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 21

Conread position: 269-444
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 168

Conread position: 269-444
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 93, 29

Conread position: 269-448
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 40

Conread position: 269-448
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 93, 35

Conread position: 269-448
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 63

Conread position: 269-448
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 111

Conread position: 269-448
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 67

Conread position: 269-448
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 112

Conread position: 269-448
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 30

Conread position: 269-450
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 68, 30

Conread position: 269-450
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 112

Conread position: 269-450
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 11

Conread position: 270-421
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 41, 80

Conread position: 270-424
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 270-429
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 7

Conread position: 270-437
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 34

Conread position: 270-438
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 44

Conread position: 270-438
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 40

Conread position: 270-438
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 85

Conread position: 270-438
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 44

Conread position: 270-447
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 92, 24

Conread position: 270-448
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 28, 93

Conread position: 271-429
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 121

Conread position: 271-438
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 31, 111

Conread position: 271-439
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 108

Conread position: 272-412
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 110

Conread position: 272-432
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 90, 28

Conread position: 273-411
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 34

Conread position: 273-424
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 107

Conread position: 273-439
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 112

Conread position: 273-448
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 129

Conread position: 274-447
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 112

Conread position: 278-424
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 31

Conread position: 279-432
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 21

Conread position: 284-447
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 99

Conread position: 285-438
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 15

Conread position: 287-398
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 96

Conread position: 288-429
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 21

Conread position: 289-424
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 290-438
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 19

Conread position: 294-404
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 83

Conread position: 295-438
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 142

Conread position: 300-409
Cow position:
Alignm length: 110
Alignm identity: 93
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 300-422
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 304-429
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 305-424
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 306-438
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 128

Conread position: 310-446
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 54

Conread position: 412-681
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 182

Conread position: 446-706
Cow position:
Alignm length: 270
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 23

Conread position: 455-696
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 72, 163

Conread position: 458-678
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 129

Conread position: 458-695
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 35

Conread position: 463-696
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 55, 8

Conread position: 469-684
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 149

Conread position: 469-690
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 60, 19

Conread position: 469-696
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 109

Conread position: 469-704
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 52

Conread position: 471-681
Cow position:
Alignm length: 211
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 471-692
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 115

Conread position: 471-695
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 147

Conread position: 471-706
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 29

Conread position: 471-706
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 55, 108

Conread position: 471-708
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 57, 33

Conread position: 476-704
Cow position:
Alignm length: 230
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 480-683
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 93, 15

Conread position: 480-692
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 12

Conread position: 481-681
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 138

Conread position: 481-701
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 116

Conread position: 482-706
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 86

Conread position: 484-684
Cow position:
Alignm length: 206
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 484-694
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 43

Conread position: 484-699
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 101

Conread position: 486-684
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 487-696
Cow position:
Alignm length: 214
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 488-658
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 31

Conread position: 490-670
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 490-701
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 36, 146

Conread position: 522-695
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 24

Conread position: 525-694
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 30

Conread position: 526-683
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 526-696
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 545-715
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 64, 121

Conread position: 550-696
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Show alignments to all cow chromosomes.