Cow genome map
| Conread name: | Ss1.1-Thy1-THY010203D03.5 |
| Conread position: | 244-404 |
| Cow position: | chr25:22730851-22730693 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 244-421 |
| Cow position: | chr25:24651431-24651608 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 118, 55 |
| Conread position: | 244-423 |
| Cow position: | chr25:36081899-36081718 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 53, 135 |
| Conread position: | 244-424 |
| Cow position: | chr25:9349259-9349430 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 244-438 |
| Cow position: | chr25:26269915-26270107 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 51, 111 |
| Conread position: | 264-438 |
| Cow position: | chr25:25861351-25861529 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 264-446 |
| Cow position: | chr25:33267728-33267540 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 39, 117 |
| Conread position: | 269-403 |
| Cow position: | chr25:13569175-13569312 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 31 |
| Conread position: | 269-410 |
| Cow position: | chr25:36779498-36779350 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 114 |
| Conread position: | 269-416 |
| Cow position: | chr25:30619061-30618914 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 269-422 |
| Cow position: | chr25:9957041-9957198 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 269-422 |
| Cow position: | chr25:12081323-12081481 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 269-422 |
| Cow position: | chr25:16001528-16001682 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 109 |
| Conread position: | 269-422 |
| Cow position: | chr25:18564484-18564331 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 93, 30 |
| Conread position: | 269-422 |
| Cow position: | chr25:31732339-31732492 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 109 |
| Conread position: | 269-422 |
| Cow position: | chr25:35333156-35333000 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 269-423 |
| Cow position: | chr25:28187948-28188104 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 269-424 |
| Cow position: | chr25:788261-788105 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 269-424 |
| Cow position: | chr25:1838234-1838077 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 93, 108 |
| Conread position: | 269-424 |
| Cow position: | chr25:5515011-5514850 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 269-424 |
| Cow position: | chr25:10138091-10137938 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 269-424 |
| Cow position: | chr25:20069718-20069564 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 92, 31 |
| Conread position: | 269-424 |
| Cow position: | chr25:25827468-25827306 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 269-424 |
| Cow position: | chr25:26679223-26679068 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 269-424 |
| Cow position: | chr25:31732737-31732892 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 93, 109 |
| Conread position: | 269-429 |
| Cow position: | chr25:7329546-7329383 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 269-429 |
| Cow position: | chr25:13642315-13642480 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 269-429 |
| Cow position: | chr25:15377324-15377163 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 269-429 |
| Cow position: | chr25:16921800-16921955 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 89, 53 |
| Conread position: | 269-429 |
| Cow position: | chr25:18894722-18894884 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 46 |
| Conread position: | 269-429 |
| Cow position: | chr25:23323197-23323041 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 25 |
| Conread position: | 269-436 |
| Cow position: | chr25:33978216-33978387 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 153 |
| Conread position: | 269-438 |
| Cow position: | chr25:11131581-11131408 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 269-438 |
| Cow position: | chr25:17342455-17342280 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 169 |
| Conread position: | 269-438 |
| Cow position: | chr25:36017539-36017366 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 269-447 |
| Cow position: | chr25:4002799-4002618 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 146 |
| Conread position: | 269-448 |
| Cow position: | chr25:61647-61474 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 95, 31 |
| Conread position: | 269-448 |
| Cow position: | chr25:10218052-10218233 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 269-448 |
| Cow position: | chr25:17658608-17658430 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 269-448 |
| Cow position: | chr25:21245607-21245790 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 93, 167 |
| Conread position: | 269-448 |
| Cow position: | chr25:26087516-26087332 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 50 |
| Conread position: | 269-450 |
| Cow position: | chr25:11315901-11315723 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 269-450 |
| Cow position: | chr25:11585515-11585333 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 269-450 |
| Cow position: | chr25:12755490-12755679 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 30, 168 |
| Conread position: | 269-450 |
| Cow position: | chr25:18905882-18905696 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 95, 119 |
| Conread position: | 269-450 |
| Cow position: | chr25:21894887-21895071 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 28, 114 |
| Conread position: | 269-450 |
| Cow position: | chr25:38135747-38135563 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 122 |
| Conread position: | 269-459 |
| Cow position: | chr25:20008129-20007943 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 93, 35 |
| Conread position: | 270-409 |
| Cow position: | chr25:11066147-11066293 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 270-418 |
| Cow position: | chr25:5920940-5920784 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 270-422 |
| Cow position: | chr25:17566583-17566427 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 270-424 |
| Cow position: | chr25:6996782-6996622 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 270-424 |
| Cow position: | chr25:7216828-7216671 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 81 |
| Conread position: | 270-429 |
| Cow position: | chr25:6464033-6464198 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 146 |
| Conread position: | 270-430 |
| Cow position: | chr25:25754002-25754159 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 39 |
| Conread position: | 270-438 |
| Cow position: | chr25:9396441-9396277 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 270-438 |
| Cow position: | chr25:16555762-16555589 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 270-438 |
| Cow position: | chr25:30319450-30319622 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 94, 29 |
| Conread position: | 271-404 |
| Cow position: | chr25:26654906-26654769 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 271-438 |
| Cow position: | chr25:1735325-1735485 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 22 |
| Conread position: | 271-442 |
| Cow position: | chr25:12824022-12824197 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 123 |
| Conread position: | 271-443 |
| Cow position: | chr25:20133319-20133492 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 38 |
| Conread position: | 271-448 |
| Cow position: | chr25:14791752-14791569 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 111 |
| Conread position: | 273-424 |
| Cow position: | chr25:8485499-8485655 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 7 |
| Conread position: | 273-448 |
| Cow position: | chr25:35625191-35625359 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 90, 57 |
| Conread position: | 276-438 |
| Cow position: | chr25:15440788-15440953 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 277-421 |
| Cow position: | chr25:36026997-36026851 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 85, 111 |
| Conread position: | 277-438 |
| Cow position: | chr25:24452186-24452341 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 277-448 |
| Cow position: | chr25:22332752-22332578 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 85, 23 |
| Conread position: | 279-422 |
| Cow position: | chr25:3983028-3982890 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 97 |
| Conread position: | 279-429 |
| Cow position: | chr25:9961186-9961338 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 279-439 |
| Cow position: | chr25:12817362-12817202 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 83, 91 |
| Conread position: | 284-429 |
| Cow position: | chr25:13672377-13672227 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 288-444 |
| Cow position: | chr25:13333402-13333245 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 145 |
| Conread position: | 289-421 |
| Cow position: | chr25:35180901-35180770 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 290-424 |
| Cow position: | chr25:21042357-21042223 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 88 |
| Conread position: | 290-448 |
| Cow position: | chr25:12204445-12204287 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 122 |
| Conread position: | 294-448 |
| Cow position: | chr25:10365780-10365935 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 41 |
| Conread position: | 294-450 |
| Cow position: | chr25:6424616-6424773 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 137, 67 |
| Conread position: | 300-450 |
| Cow position: | chr25:14467114-14467271 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 301-438 |
| Cow position: | chr25:6474132-6474268 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 79 |
| Conread position: | 303-438 |
| Cow position: | chr25:35110163-35110299 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 85 |
| Conread position: | 303-448 |
| Cow position: | chr25:6255974-6256122 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 314-439 |
| Cow position: | chr25:12260943-12261067 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 47 |
| Conread position: | 316-429 |
| Cow position: | chr25:14931810-14931928 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 455-705 |
| Cow position: | chr25:5253907-5254164 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 457-696 |
| Cow position: | chr25:25925296-25925532 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 118 |
| Conread position: | 458-682 |
| Cow position: | chr25:13973646-13973872 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 68, 156 |
| Conread position: | 458-694 |
| Cow position: | chr25:22935753-22935998 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 461-696 |
| Cow position: | chr25:18610739-18610971 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 11 |
| Conread position: | 466-708 |
| Cow position: | chr25:27815715-27815960 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 109 |
| Conread position: | 467-704 |
| Cow position: | chr25:21303334-21303574 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 62, 99 |
| Conread position: | 468-701 |
| Cow position: | chr25:11836199-11836434 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 58, 113 |
| Conread position: | 469-684 |
| Cow position: | chr25:5141841-5141620 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 469-689 |
| Cow position: | chr25:25547298-25547522 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 55, 112 |
| Conread position: | 469-695 |
| Cow position: | chr25:31189095-31188872 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 104 |
| Conread position: | 469-696 |
| Cow position: | chr25:15930529-15930754 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 58, 115 |
| Conread position: | 469-706 |
| Cow position: | chr25:18618289-18618518 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 55 |
| Conread position: | 470-705 |
| Cow position: | chr25:4000814-4001055 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 171 |
| Conread position: | 471-675 |
| Cow position: | chr25:30162365-30162154 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 471-682 |
| Cow position: | chr25:3965608-3965822 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 67, 82 |
| Conread position: | 471-696 |
| Cow position: | chr25:4122410-4122637 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 471-696 |
| Cow position: | chr25:16345541-16345766 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 143 |
| Conread position: | 471-698 |
| Cow position: | chr25:4371838-4371609 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 49, 219 |
| Conread position: | 471-701 |
| Cow position: | chr25:9044037-9044263 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 471-705 |
| Cow position: | chr25:21383930-21383709 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 471-705 |
| Cow position: | chr25:40836495-40836256 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 58, 141 |
| Conread position: | 471-706 |
| Cow position: | chr25:10301400-10301636 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 111 |
| Conread position: | 476-690 |
| Cow position: | chr25:11920590-11920370 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 476-701 |
| Cow position: | chr25:10356739-10356510 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 51, 90 |
| Conread position: | 476-701 |
| Cow position: | chr25:13004991-13004762 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 47, 130 |
| Conread position: | 476-705 |
| Cow position: | chr25:2196169-2196397 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 477-701 |
| Cow position: | chr25:7825380-7825168 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 479-696 |
| Cow position: | chr25:4867449-4867664 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 480-689 |
| Cow position: | chr25:22277550-22277337 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 155 |
| Conread position: | 480-692 |
| Cow position: | chr25:4249246-4249462 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 480-705 |
| Cow position: | chr25:28957523-28957298 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 481-684 |
| Cow position: | chr25:18549155-18548953 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 481-701 |
| Cow position: | chr25:6270615-6270838 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 146 |
| Conread position: | 481-701 |
| Cow position: | chr25:36499469-36499688 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 482-683 |
| Cow position: | chr25:3970168-3970373 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 482-705 |
| Cow position: | chr25:18779757-18779536 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 59 |
| Conread position: | 484-677 |
| Cow position: | chr25:23863641-23863448 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 484-701 |
| Cow position: | chr25:14486364-14486143 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 486-675 |
| Cow position: | chr25:18742855-18742661 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 487-680 |
| Cow position: | chr25:4845781-4845979 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 488-681 |
| Cow position: | chr25:27424024-27423826 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 40, 87 |
| Conread position: | 493-675 |
| Cow position: | chr25:38382595-38382774 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 89 |
| Conread position: | 494-696 |
| Cow position: | chr25:31277720-31277514 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 494-701 |
| Cow position: | chr25:5154758-5154546 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 498-682 |
| Cow position: | chr25:17449791-17449611 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 504-696 |
| Cow position: | chr25:4259087-4258895 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 528-680 |
| Cow position: | chr25:9986547-9986699 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 528-689 |
| Cow position: | chr25:3895854-3896014 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 531-682 |
| Cow position: | chr25:28442717-28442567 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 531-690 |
| Cow position: | chr25:3432108-3432269 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 531-695 |
| Cow position: | chr25:24121251-24121090 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 531-701 |
| Cow position: | chr25:24501558-24501389 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 531-706 |
| Cow position: | chr25:5797001-5797172 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 534-695 |
| Cow position: | chr25:17717327-17717487 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 534-696 |
| Cow position: | chr25:7516928-7516766 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 535-672 |
| Cow position: | chr25:31527782-31527921 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 535-701 |
| Cow position: | chr25:33476123-33476290 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 536-690 |
| Cow position: | chr25:23836296-23836141 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 538-696 |
| Cow position: | chr25:5060872-5060714 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 551-706 |
| Cow position: | chr25:9933943-9933789 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 551-712 |
| Cow position: | chr25:30148222-30148061 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 555-705 |
| Cow position: | chr25:4255034-4255185 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 558-691 |
| Cow position: | chr25:30665969-30665837 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 558-701 |
| Cow position: | chr25:2604762-2604620 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 562-692 |
| Cow position: | chr25:26602814-26602685 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.