Cow genome map
| Conread name: | Ss1.1-Thy1-THY010203D03.5 |
| Conread position: | 244-413 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 118, 54 |
| Conread position: | 244-429 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 244-438 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 58, 163 |
| Conread position: | 244-448 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 120, 134 |
| Conread position: | 269-406 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 269-422 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 269-424 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 269-424 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 93, 109 |
| Conread position: | 269-424 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 87 |
| Conread position: | 269-424 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 269-424 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 269-424 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 95, 110 |
| Conread position: | 269-425 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 269-428 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 269-429 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 37, 115 |
| Conread position: | 269-429 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 68, 30 |
| Conread position: | 269-429 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 25 |
| Conread position: | 269-429 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 269-430 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 269-431 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 155 |
| Conread position: | 269-438 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 116 |
| Conread position: | 269-438 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 269-438 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 168 |
| Conread position: | 269-438 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 168 |
| Conread position: | 269-438 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 94, 109 |
| Conread position: | 269-438 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 269-438 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 35 |
| Conread position: | 269-439 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 269-448 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 122 |
| Conread position: | 269-448 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 25 |
| Conread position: | 269-448 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 30, 111 |
| Conread position: | 269-448 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 95, 8 |
| Conread position: | 269-450 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 269-450 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 269-450 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 92, 30 |
| Conread position: | 269-450 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 133 |
| Conread position: | 269-460 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 270-411 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 270-430 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 270-448 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 92, 29 |
| Conread position: | 271-424 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 271-424 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 271-429 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 271-438 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 141 |
| Conread position: | 273-422 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 274-412 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 276-446 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 284-419 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 284-424 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 132 |
| Conread position: | 286-421 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 92 |
| Conread position: | 286-450 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 291-424 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 90 |
| Conread position: | 293-450 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 294-429 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 85 |
| Conread position: | 302-424 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 359-692 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 245 |
| Conread position: | 455-696 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 458-691 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 458-696 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 466-695 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 178 |
| Conread position: | 467-682 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 133 |
| Conread position: | 469-695 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 142, 24 |
| Conread position: | 469-699 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 64, 114 |
| Conread position: | 469-701 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 471-690 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 199, 47 |
| Conread position: | 471-692 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 471-692 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 55, 136 |
| Conread position: | 471-695 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 471-696 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 45, 63 |
| Conread position: | 471-703 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 476-688 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 65, 206 |
| Conread position: | 476-701 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 476-701 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 53, 43 |
| Conread position: | 476-704 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 476-722 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 477-682 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 478-672 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 478-690 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 480-683 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 481-684 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 481-706 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 145 |
| Conread position: | 484-645 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 147 |
| Conread position: | 484-701 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 226 |
| Conread position: | 484-707 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 100 |
| Conread position: | 485-690 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 485-701 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 487-696 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 127 |
| Conread position: | 487-715 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 488-701 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 508-705 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 20, 124 |
| Conread position: | 521-684 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 525-692 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 526-689 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 531-701 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 534-701 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 164, 25 |
| Conread position: | 535-681 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 537-701 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 548-690 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 551-690 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 551-694 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 141, 28 |
| Conread position: | 551-696 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 55 |
| Conread position: | 552-695 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 557-695 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-705 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 557-726 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 562-706 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 130, 51 |
| Conread position: | 579-706 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.