Cow genome map

Conread name: Ss1.1-Thy1-THY010203D03.5

Conread position: 242-429
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 140

Conread position: 242-429
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 6, 65

Conread position: 244-438
Cow position:
Alignm length: 196
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 188

Conread position: 244-450
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 118, 134

Conread position: 256-448
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 268-438
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 112

Conread position: 268-438
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 22

Conread position: 269-397
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 269-411
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 24

Conread position: 269-416
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 269-419
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 68

Conread position: 269-421
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 30

Conread position: 269-421
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 44

Conread position: 269-421
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 93, 136

Conread position: 269-423
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 35

Conread position: 269-424
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 121

Conread position: 269-424
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 40

Conread position: 269-424
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 122

Conread position: 269-424
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 25

Conread position: 269-424
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 116

Conread position: 269-424
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 95, 25

Conread position: 269-426
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 269-429
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 109

Conread position: 269-429
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 94

Conread position: 269-430
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 69

Conread position: 269-431
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 94, 27

Conread position: 269-438
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 110

Conread position: 269-438
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 141

Conread position: 269-438
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 113

Conread position: 269-438
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 95, 112

Conread position: 269-438
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 109

Conread position: 269-438
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 112

Conread position: 269-438
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 26, 113

Conread position: 269-438
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 43

Conread position: 269-438
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 32

Conread position: 269-438
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 31

Conread position: 269-438
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 148

Conread position: 269-442
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 112

Conread position: 269-444
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 60

Conread position: 269-444
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 111

Conread position: 269-446
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 269-448
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 54

Conread position: 269-448
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 24

Conread position: 269-448
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 71

Conread position: 269-448
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 110

Conread position: 269-448
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 29

Conread position: 269-448
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 110

Conread position: 269-448
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 167

Conread position: 269-448
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 93, 31

Conread position: 269-450
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 116

Conread position: 269-450
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 30

Conread position: 269-450
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 172

Conread position: 269-450
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 109

Conread position: 269-455
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 67

Conread position: 269-459
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 68

Conread position: 269-461
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 27, 55

Conread position: 270-424
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 64

Conread position: 270-424
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 98

Conread position: 270-438
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 167

Conread position: 270-445
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 63

Conread position: 270-456
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 112

Conread position: 271-429
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 86

Conread position: 271-429
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 108

Conread position: 271-448
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 110

Conread position: 272-437
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 114

Conread position: 272-439
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 272-448
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 84, 28

Conread position: 273-438
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 147

Conread position: 273-455
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 40

Conread position: 276-449
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 102

Conread position: 279-424
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 30

Conread position: 279-429
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 81, 99

Conread position: 284-424
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 284-438
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 100

Conread position: 284-448
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 94

Conread position: 284-450
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 9

Conread position: 287-450
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 146

Conread position: 289-429
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 289-448
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 291-412
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 291-450
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 89

Conread position: 302-431
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 20

Conread position: 302-431
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 9

Conread position: 302-448
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 8

Conread position: 302-448
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 7

Conread position: 448-701
Cow position:
Alignm length: 259
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 9

Conread position: 453-677
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 145

Conread position: 453-694
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 108

Conread position: 455-682
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 455-695
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 74

Conread position: 455-711
Cow position:
Alignm length: 266
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 455-725
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 85

Conread position: 459-704
Cow position:
Alignm length: 255
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 13

Conread position: 467-688
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 471-674
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 42

Conread position: 471-684
Cow position:
Alignm length: 214
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 471-692
Cow position:
Alignm length: 223
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 57

Conread position: 471-696
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 153, 67

Conread position: 471-701
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 21

Conread position: 476-682
Cow position:
Alignm length: 208
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 31

Conread position: 476-684
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 140, 69

Conread position: 476-688
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 476-688
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 111

Conread position: 476-690
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 100

Conread position: 476-692
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 178

Conread position: 476-701
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 477-695
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 17

Conread position: 477-698
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 34, 192

Conread position: 480-702
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 38

Conread position: 480-709
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 86

Conread position: 481-689
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 57

Conread position: 481-703
Cow position:
Alignm length: 229
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 100

Conread position: 484-706
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 218, 190

Conread position: 485-691
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 485-695
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 181

Conread position: 490-701
Cow position:
Alignm length: 216
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 71

Conread position: 494-688
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 54

Conread position: 522-695
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 157

Conread position: 525-692
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 527-684
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 528-683
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 531-706
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 534-692
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 540-706
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 541-685
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 551-701
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 56

Show alignments to all cow chromosomes.