Cow genome map

Conread name: Ss1.1-Thy1-THY010203D03.5

Conread position: 244-438
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 112

Conread position: 268-428
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 268-450
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 74

Conread position: 269-383
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 32

Conread position: 269-418
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 25

Conread position: 269-422
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 269-423
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 112

Conread position: 269-423
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 35

Conread position: 269-423
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 24

Conread position: 269-424
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 42

Conread position: 269-424
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 57

Conread position: 269-424
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 269-424
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 109

Conread position: 269-424
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 32, 123

Conread position: 269-424
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 109

Conread position: 269-424
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 58

Conread position: 269-424
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 66

Conread position: 269-425
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 93

Conread position: 269-429
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 30

Conread position: 269-429
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 63

Conread position: 269-429
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 45, 84

Conread position: 269-429
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 65

Conread position: 269-429
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 59

Conread position: 269-429
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 35

Conread position: 269-431
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 269-438
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 170

Conread position: 269-438
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 68, 61

Conread position: 269-438
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 29

Conread position: 269-438
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 65

Conread position: 269-438
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 111

Conread position: 269-439
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 93, 28

Conread position: 269-444
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 52

Conread position: 269-447
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 23

Conread position: 269-448
Cow position:
Alignm length: 183
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 66

Conread position: 269-448
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 116

Conread position: 269-448
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 269-448
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 73

Conread position: 269-448
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 94, 109

Conread position: 269-448
Cow position:
Alignm length: 180
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 269-448
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 118

Conread position: 269-448
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 37, 125

Conread position: 269-449
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 108

Conread position: 269-450
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 109

Conread position: 269-450
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 270-418
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 25, 46

Conread position: 270-421
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 270-423
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 92, 30

Conread position: 270-429
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 112

Conread position: 270-438
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 37, 30

Conread position: 270-438
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 147

Conread position: 270-438
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 168

Conread position: 270-446
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 98

Conread position: 270-448
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 66

Conread position: 270-448
Cow position:
Alignm length: 187
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 110

Conread position: 270-450
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 25, 46

Conread position: 270-451
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 110

Conread position: 271-439
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 28

Conread position: 271-450
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 65

Conread position: 272-429
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 273-445
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 48

Conread position: 277-439
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 103

Conread position: 277-450
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 103

Conread position: 279-422
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 102

Conread position: 279-439
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 101

Conread position: 285-430
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 5, 15

Conread position: 286-460
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 38

Conread position: 288-448
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 12

Conread position: 289-448
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 289-450
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 291-448
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 42

Conread position: 304-448
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 23

Conread position: 310-429
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 81

Conread position: 455-682
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 119

Conread position: 455-706
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 162

Conread position: 455-712
Cow position:
Alignm length: 266
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 224

Conread position: 458-701
Cow position:
Alignm length: 250
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 467-697
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 107

Conread position: 471-695
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 55, 81

Conread position: 471-704
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 475-704
Cow position:
Alignm length: 239
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 191

Conread position: 475-707
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 52, 167

Conread position: 476-684
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 47, 108

Conread position: 476-695
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 45

Conread position: 476-695
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 72

Conread position: 476-696
Cow position:
Alignm length: 227
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 99

Conread position: 476-704
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 51, 21

Conread position: 476-707
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 16

Conread position: 477-690
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 52, 105

Conread position: 477-694
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 477-701
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 481-700
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 48, 104

Conread position: 484-695
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 484-695
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 28

Conread position: 484-701
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 484-704
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 40

Conread position: 485-704
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 12

Conread position: 485-718
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 23

Conread position: 488-692
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 39, 106

Conread position: 488-745
Cow position:
Alignm length: 270
Alignm identity: 183
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 76

Conread position: 489-692
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 490-696
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 36, 113

Conread position: 500-682
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 125

Conread position: 501-679
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 175

Conread position: 528-680
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 530-695
Cow position:
Alignm length: 166
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 530-701
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 530-712
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 531-695
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 143

Conread position: 531-701
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 146, 75

Conread position: 531-701
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 545-696
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 75

Conread position: 554-701
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 143, 31

Conread position: 560-705
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 132, 0

Conread position: 587-696
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 19

Show alignments to all cow chromosomes.