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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010205F03.5
        

               
Conread position:
               
9-268
               

               
Cow position:
               
chr22:45845982-45846237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
11-268
               

               
Cow position:
               
chr22:11767209-11766955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
11-268
               

               
Cow position:
               
chr22:27740731-27740985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 135
               

               
Conread position:
               
13-259
               

               
Cow position:
               
chr22:2502675-2502911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
14-137
               

               
Cow position:
               
chr22:14601346-14601470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 36
               

               
Conread position:
               
14-167
               

               
Cow position:
               
chr22:13840978-13841134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 6
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr22:226612-226406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
14-252
               

               
Cow position:
               
chr22:40386999-40387231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
8, 76
               

               
Conread position:
               
14-268
               

               
Cow position:
               
chr22:27329053-27328798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
14-268
               

               
Cow position:
               
chr22:44575010-44574754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
16-244
               

               
Cow position:
               
chr22:7838438-7838661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
17-137
               

               
Cow position:
               
chr22:8397970-8397849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
99, 86
               

               
Conread position:
               
18-165
               

               
Cow position:
               
chr22:25341866-25342009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-172
               

               
Cow position:
               
chr22:10678138-10677991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
18-255
               

               
Cow position:
               
chr22:17152527-17152759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
18-259
               

               
Cow position:
               
chr22:24628804-24628572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
18-267
               

               
Cow position:
               
chr22:7164799-7165057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 130
               

               
Conread position:
               
18-268
               

               
Cow position:
               
chr22:12315657-12315905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
98, 120
               

               
Conread position:
               
18-268
               

               
Cow position:
               
chr22:24611234-24610999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
18-268
               

               
Cow position:
               
chr22:40121032-40120786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
18-272
               

               
Cow position:
               
chr22:39472530-39472265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
18-273
               

               
Cow position:
               
chr22:13769320-13769577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
18-307
               

               
Cow position:
               
chr22:14844420-14844694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
18-309
               

               
Cow position:
               
chr22:19047972-19047681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
19-174
               

               
Cow position:
               
chr22:27818847-27819010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
20-217
               

               
Cow position:
               
chr22:22553387-22553195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
183, 95
               

               
Conread position:
               
20-240
               

               
Cow position:
               
chr22:4990322-4990100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
20-262
               

               
Cow position:
               
chr22:43292049-43291813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
96, 118
               

               
Conread position:
               
21-164
               

               
Cow position:
               
chr22:1081354-1081497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
21-172
               

               
Cow position:
               
chr22:26506875-26506725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
96, 31
               

               
Conread position:
               
21-186
               

               
Cow position:
               
chr22:18654196-18654030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
21-210
               

               
Cow position:
               
chr22:15959922-15959730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
21-248
               

               
Cow position:
               
chr22:10420880-10421107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
21-251
               

               
Cow position:
               
chr22:31213426-31213657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
126, 192
               

               
Conread position:
               
21-266
               

               
Cow position:
               
chr22:3908771-3909023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 127
               

               
Conread position:
               
21-267
               

               
Cow position:
               
chr22:8116238-8115994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
21-268
               

               
Cow position:
               
chr22:40374455-40374704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
21-269
               

               
Cow position:
               
chr22:9668414-9668672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
21-269
               

               
Cow position:
               
chr22:15068274-15068522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
21-273
               

               
Cow position:
               
chr22:8429733-8429987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
21-273
               

               
Cow position:
               
chr22:23689356-23689104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
21-316
               

               
Cow position:
               
chr22:21567844-21568153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 108
               

               
Conread position:
               
23-268
               

               
Cow position:
               
chr22:41898595-41898351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
197, 34
               

               
Conread position:
               
24-251
               

               
Cow position:
               
chr22:4108887-4108652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
24-255
               

               
Cow position:
               
chr22:38439302-38439075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
24-266
               

               
Cow position:
               
chr22:1035966-1035719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr22:19775579-19775338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
114, 34
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr22:20475423-20475187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
24-272
               

               
Cow position:
               
chr22:27825688-27825939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
33, 106
               

               
Conread position:
               
24-273
               

               
Cow position:
               
chr22:16812311-16812064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
24-277
               

               
Cow position:
               
chr22:10339261-10339014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
25-139
               

               
Cow position:
               
chr22:3945027-3945144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
25-142
               

               
Cow position:
               
chr22:26658908-26659024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-155
               

               
Cow position:
               
chr22:26969635-26969765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 117
               

               
Conread position:
               
25-162
               

               
Cow position:
               
chr22:10585848-10585714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
25-166
               

               
Cow position:
               
chr22:4974571-4974430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 83
               

               
Conread position:
               
25-167
               

               
Cow position:
               
chr22:10292815-10292962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
25-167
               

               
Cow position:
               
chr22:11497046-11497195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 125
               

               
Conread position:
               
25-167
               

               
Cow position:
               
chr22:15020549-15020404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
25-167
               

               
Cow position:
               
chr22:26151256-26151118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
25-167
               

               
Cow position:
               
chr22:28731528-28731671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
25-167
               

               
Cow position:
               
chr22:32895070-32895214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-168
               

               
Cow position:
               
chr22:26316322-26316465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 117
               

               
Conread position:
               
25-172
               

               
Cow position:
               
chr22:1822021-1821872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
25-174
               

               
Cow position:
               
chr22:6123047-6122903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
25-174
               

               
Cow position:
               
chr22:22146084-22146234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
91, 118
               

               
Conread position:
               
25-183
               

               
Cow position:
               
chr22:1602040-1602200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
25-187
               

               
Cow position:
               
chr22:12598940-12599101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
25-201
               

               
Cow position:
               
chr22:2010651-2010830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
25-201
               

               
Cow position:
               
chr22:41271146-41270973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-211
               

               
Cow position:
               
chr22:25629910-25629726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 113
               

               
Conread position:
               
25-238
               

               
Cow position:
               
chr22:16822956-16823166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
25-246
               

               
Cow position:
               
chr22:17993179-17992958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-247
               

               
Cow position:
               
chr22:6215704-6215482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
25-247
               

               
Cow position:
               
chr22:37324399-37324616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
162, 25
               

               
Conread position:
               
25-248
               

               
Cow position:
               
chr22:27274837-27274625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
25-248
               

               
Cow position:
               
chr22:34606436-34606666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
25-249
               

               
Cow position:
               
chr22:10920007-10919776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
25-250
               

               
Cow position:
               
chr22:16532933-16533151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
25-252
               

               
Cow position:
               
chr22:12681944-12681721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
25-252
               

               
Cow position:
               
chr22:34476155-34475921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
25-253
               

               
Cow position:
               
chr22:30963974-30964208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
25-254
               

               
Cow position:
               
chr22:7967554-7967783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
25-254
               

               
Cow position:
               
chr22:41495829-41496053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr22:534350-534581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr22:845755-845985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr22:1563397-1563171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
180, 33
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr22:2623666-2623440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr22:12573061-12573286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr22:12803532-12803303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr22:22160577-22160808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr22:22223044-22223269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr22:30998750-30998968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr22:34750531-34750755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
25-259
               

               
Cow position:
               
chr22:1975465-1975695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-259
               

               
Cow position:
               
chr22:11130723-11130956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
25-259
               

               
Cow position:
               
chr22:26339609-26339840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
25-259
               

               
Cow position:
               
chr22:28058196-28057964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
25-266
               

               
Cow position:
               
chr22:139451-139207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
25-266
               

               
Cow position:
               
chr22:4645626-4645865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
25-266
               

               
Cow position:
               
chr22:30111347-30111592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 149
               

               
Conread position:
               
25-266
               

               
Cow position:
               
chr22:34398605-34398363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
91, 118
               

               
Conread position:
               
25-266
               

               
Cow position:
               
chr22:37201706-37201942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
92, 111
               

               
Conread position:
               
25-267
               

               
Cow position:
               
chr22:2095405-2095647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
68, 124
               

               
Conread position:
               
25-267
               

               
Cow position:
               
chr22:23403794-23403548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:877368-877610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:1279535-1279290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:1309875-1309639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:1590876-1591119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:1848917-1849169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:3950103-3950347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
34, 125
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:3987369-3987613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
91, 113
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:6097172-6096922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:7851816-7852059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
30, 104
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:9520999-9521240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:10302867-10303111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 114
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:12313276-12313519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
92, 103
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:14924879-14924637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:15025257-15025015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:16044568-16044321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:17814077-17814327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 191
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:21746490-21746738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 237
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:23122169-23121907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:23176588-23176346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:23856902-23857141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:26184309-26184066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:29641966-29642204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:32188995-32188759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:32326656-32326894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:32698613-32698855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:33448231-33447986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr22:41982862-41982627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr22:23833140-23833392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr22:38930657-38930411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 159
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr22:7153734-7153978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 128
               

               
Conread position:
               
25-272
               

               
Cow position:
               
chr22:15153851-15154100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr22:1484715-1484963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr22:12800516-12800771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr22:16053162-16053406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr22:22908044-22908286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr22:23854826-23855070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr22:26134378-26134124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr22:29013730-29013980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
25-274
               

               
Cow position:
               
chr22:15760222-15760463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
25-276
               

               
Cow position:
               
chr22:15090593-15090846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
25-277
               

               
Cow position:
               
chr22:30049716-30049461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
25-280
               

               
Cow position:
               
chr22:11600891-11601138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 76
               

               
Conread position:
               
25-280
               

               
Cow position:
               
chr22:11613277-11613532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 109
               

               
Conread position:
               
25-288
               

               
Cow position:
               
chr22:9127259-9127523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
25-307
               

               
Cow position:
               
chr22:644909-644631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
25-307
               

               
Cow position:
               
chr22:5467521-5467216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
25-307
               

               
Cow position:
               
chr22:36539816-36539510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
25-308
               

               
Cow position:
               
chr22:20626694-20626983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
25-309
               

               
Cow position:
               
chr22:5337743-5337466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
25-309
               

               
Cow position:
               
chr22:25943329-25943610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
25-309
               

               
Cow position:
               
chr22:38940096-38939801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
92, 103
               

               
Conread position:
               
25-310
               

               
Cow position:
               
chr22:7884844-7885119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
25-310
               

               
Cow position:
               
chr22:25743098-25742811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
25-314
               

               
Cow position:
               
chr22:30269266-30269559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-316
               

               
Cow position:
               
chr22:864665-864372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
25-316
               

               
Cow position:
               
chr22:4563215-4563514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
25-316
               

               
Cow position:
               
chr22:9977673-9977952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
25-316
               

               
Cow position:
               
chr22:10532355-10532651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
25-316
               

               
Cow position:
               
chr22:30483770-30484062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
25-316
               

               
Cow position:
               
chr22:40349203-40349499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
25-320
               

               
Cow position:
               
chr22:10685235-10684938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
234, 33
               

               
Conread position:
               
25-321
               

               
Cow position:
               
chr22:6610496-6610195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
25-321
               

               
Cow position:
               
chr22:8090675-8090372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-321
               

               
Cow position:
               
chr22:13957792-13957482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
25-360
               

               
Cow position:
               
chr22:40071834-40072170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
25-369
               

               
Cow position:
               
chr22:6622392-6622031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 111
               

               
Conread position:
               
25-432
               

               
Cow position:
               
chr22:9283745-9283337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
26-167
               

               
Cow position:
               
chr22:18219036-18218895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
26-174
               

               
Cow position:
               
chr22:66290-66432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
26-183
               

               
Cow position:
               
chr22:11500634-11500789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
91, 102
               

               
Conread position:
               
26-239
               

               
Cow position:
               
chr22:3965038-3965252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
26-248
               

               
Cow position:
               
chr22:16621024-16621251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 123
               

               
Conread position:
               
26-259
               

               
Cow position:
               
chr22:14372039-14372256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
26-259
               

               
Cow position:
               
chr22:14691118-14690885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
26-259
               

               
Cow position:
               
chr22:27835384-27835619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 186
               

               
Conread position:
               
26-266
               

               
Cow position:
               
chr22:4535470-4535236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 112
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr22:4583411-4583657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr22:5290700-5290945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 117
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr22:16251711-16251478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr22:21355286-21355046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr22:22861055-22860817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr22:28665139-28665378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
91, 106
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr22:32661359-32661604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 126
               

               
Conread position:
               
26-272
               

               
Cow position:
               
chr22:17132556-17132311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
26-307
               

               
Cow position:
               
chr22:41245099-41245385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
26-309
               

               
Cow position:
               
chr22:8733477-8733195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
26-310
               

               
Cow position:
               
chr22:15568160-15567870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
111, 32
               

               
Conread position:
               
26-315
               

               
Cow position:
               
chr22:5384505-5384792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
26-316
               

               
Cow position:
               
chr22:590193-590477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
26-316
               

               
Cow position:
               
chr22:2523820-2524108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
26-316
               

               
Cow position:
               
chr22:14178972-14178674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
26-316
               

               
Cow position:
               
chr22:30699033-30699323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
26-350
               

               
Cow position:
               
chr22:27322170-27322499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
27-166
               

               
Cow position:
               
chr22:41045063-41044916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
27-239
               

               
Cow position:
               
chr22:34726527-34726734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
27-247
               

               
Cow position:
               
chr22:3533799-3534007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
27-252
               

               
Cow position:
               
chr22:1266075-1265845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
27-252
               

               
Cow position:
               
chr22:10632774-10632993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
27-265
               

               
Cow position:
               
chr22:43131696-43131466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr22:59466-59705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr22:2912727-2912495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr22:4017332-4017568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr22:4076040-4075791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr22:12968216-12967974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr22:18926210-18926451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
27-315
               

               
Cow position:
               
chr22:40789424-40789717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
27-321
               

               
Cow position:
               
chr22:25222044-25221740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
27-331
               

               
Cow position:
               
chr22:36633085-36633378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
28-253
               

               
Cow position:
               
chr22:13670318-13670087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
28-268
               

               
Cow position:
               
chr22:32480623-32480376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
28-268
               

               
Cow position:
               
chr22:34712573-34712820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
34, 237
               

               
Conread position:
               
28-316
               

               
Cow position:
               
chr22:16292061-16291775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 30
               

               
Conread position:
               
29-153
               

               
Cow position:
               
chr22:3541866-3541739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 102
               

               
Conread position:
               
29-154
               

               
Cow position:
               
chr22:26123473-26123347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 115
               

               
Conread position:
               
29-234
               

               
Cow position:
               
chr22:26097763-26097559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
29-246
               

               
Cow position:
               
chr22:8412385-8412601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
29-247
               

               
Cow position:
               
chr22:31593002-31592782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 148
               

               
Conread position:
               
29-248
               

               
Cow position:
               
chr22:25237293-25237064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
29-261
               

               
Cow position:
               
chr22:30515109-30515345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
29-268
               

               
Cow position:
               
chr22:44180448-44180688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
29-295
               

               
Cow position:
               
chr22:40048413-40048677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
29-307
               

               
Cow position:
               
chr22:15668617-15668334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 152
               

               
Conread position:
               
29-315
               

               
Cow position:
               
chr22:14143262-14142966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
25, 155
               

               
Conread position:
               
29-316
               

               
Cow position:
               
chr22:28370804-28371089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
29-356
               

               
Cow position:
               
chr22:31646350-31646681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
118, 34
               

               
Conread position:
               
30-197
               

               
Cow position:
               
chr22:3241841-3241675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 108
               

               
Conread position:
               
30-251
               

               
Cow position:
               
chr22:18126878-18126656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
30-252
               

               
Cow position:
               
chr22:17259299-17259088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
30-253
               

               
Cow position:
               
chr22:47741275-47741500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 143
               

               
Conread position:
               
30-255
               

               
Cow position:
               
chr22:5616162-5616384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
30-268
               

               
Cow position:
               
chr22:8882876-8883106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
30-268
               

               
Cow position:
               
chr22:17125439-17125677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
30-276
               

               
Cow position:
               
chr22:3251135-3250890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
30-277
               

               
Cow position:
               
chr22:28071416-28071663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
30-316
               

               
Cow position:
               
chr22:34735726-34736006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
270, 28
               

               
Conread position:
               
31-137
               

               
Cow position:
               
chr22:25764625-25764519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 97
               

               
Conread position:
               
31-166
               

               
Cow position:
               
chr22:6360630-6360493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
31-253
               

               
Cow position:
               
chr22:21325875-21325653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 121
               

               
Conread position:
               
31-255
               

               
Cow position:
               
chr22:24734453-24734236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
31-268
               

               
Cow position:
               
chr22:4119706-4119467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
31-268
               

               
Cow position:
               
chr22:23805123-23804883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
31-273
               

               
Cow position:
               
chr22:16273493-16273740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
31-288
               

               
Cow position:
               
chr22:31153815-31154070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
31-312
               

               
Cow position:
               
chr22:17852766-17852484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
237, 27
               

               
Conread position:
               
33-255
               

               
Cow position:
               
chr22:12341054-12341278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 181
               

               
Conread position:
               
33-268
               

               
Cow position:
               
chr22:27480754-27480990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 116
               

               
Conread position:
               
34-268
               

               
Cow position:
               
chr22:36433107-36432878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
35-162
               

               
Cow position:
               
chr22:10362926-10363064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
35-248
               

               
Cow position:
               
chr22:17193250-17193465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 192
               

               
Conread position:
               
35-268
               

               
Cow position:
               
chr22:27681578-27681816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
81, 109
               

               
Conread position:
               
35-288
               

               
Cow position:
               
chr22:17295067-17294820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
37-268
               

               
Cow position:
               
chr22:8418331-8418556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
37-268
               

               
Cow position:
               
chr22:36560792-36560564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
37-276
               

               
Cow position:
               
chr22:18025692-18025455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
161, 99
               

               
Conread position:
               
41-200
               

               
Cow position:
               
chr22:21264157-21264321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
42-266
               

               
Cow position:
               
chr22:1326288-1326512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
43-247
               

               
Cow position:
               
chr22:13849575-13849379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
45-266
               

               
Cow position:
               
chr22:12929402-12929187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
45-268
               

               
Cow position:
               
chr22:23980340-23980113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 173
               

               
Conread position:
               
45-312
               

               
Cow position:
               
chr22:17126327-17126601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 99
               

               
Conread position:
               
46-309
               

               
Cow position:
               
chr22:42684780-42685033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
52, 98
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chr22:4541816-4542029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chr22:27828259-27828473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chr22:43237532-43237313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
50-258
               

               
Cow position:
               
chr22:13221988-13222202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
50-265
               

               
Cow position:
               
chr22:12388974-12389191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
51-167
               

               
Cow position:
               
chr22:45578842-45578960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
51-268
               

               
Cow position:
               
chr22:2627453-2627675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
51-268
               

               
Cow position:
               
chr22:11697319-11697100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
51-272
               

               
Cow position:
               
chr22:2123173-2123391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
69, 85
               

               
Conread position:
               
51-272
               

               
Cow position:
               
chr22:27619607-27619833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
51-273
               

               
Cow position:
               
chr22:14091343-14091123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
51-321
               

               
Cow position:
               
chr22:5837146-5837424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
69, 187
               

               
Conread position:
               
52-242
               

               
Cow position:
               
chr22:10609233-10609427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
52-268
               

               
Cow position:
               
chr22:47555729-47555943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
53-234
               

               
Cow position:
               
chr22:1911550-1911726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
53-247
               

               
Cow position:
               
chr22:35753428-35753235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
43, 124
               

               
Conread position:
               
53-254
               

               
Cow position:
               
chr22:19890840-19891041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
53-259
               

               
Cow position:
               
chr22:45132771-45132561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 154
               

               
Conread position:
               
54-268
               

               
Cow position:
               
chr22:9372404-9372616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
54-268
               

               
Cow position:
               
chr22:37030640-37030422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
55-255
               

               
Cow position:
               
chr22:39215733-39215533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
56-251
               

               
Cow position:
               
chr22:12829728-12829531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
57-259
               

               
Cow position:
               
chr22:12892482-12892280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
58-229
               

               
Cow position:
               
chr22:13094283-13094455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
58-268
               

               
Cow position:
               
chr22:6852698-6852489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
58-268
               

               
Cow position:
               
chr22:23736126-23735920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
60-243
               

               
Cow position:
               
chr22:46568001-46567822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
64-267
               

               
Cow position:
               
chr22:39602173-39602376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
65-272
               

               
Cow position:
               
chr22:33098518-33098297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
68-268
               

               
Cow position:
               
chr22:3842513-3842712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 136
               

               
Conread position:
               
70-316
               

               
Cow position:
               
chr22:9597683-9597427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
73-247
               

               
Cow position:
               
chr22:26074822-26074995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
84, 69
               

               
Conread position:
               
76-268
               

               
Cow position:
               
chr22:25254078-25254267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
81-268
               

               
Cow position:
               
chr22:27275372-27275557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
82-268
               

               
Cow position:
               
chr22:34618705-34618893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
87-268
               

               
Cow position:
               
chr22:3301423-3301244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
87-309
               

               
Cow position:
               
chr22:12749985-12749759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
88-268
               

               
Cow position:
               
chr22:10553770-10553590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
91-267
               

               
Cow position:
               
chr22:29344796-29344972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 15
               
Show alignments to all cow chromosomes.