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Cow genome map

           
Conread name:
           
Ss1.1-Thy1-THY010205F03.5
        

               
Conread position:
               
12-266
               

               
Cow position:
               
chr24:27290687-27290943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
14-125
               

               
Cow position:
               
chr24:30776845-30776732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
14-239
               

               
Cow position:
               
chr24:2096069-2095837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
14-268
               

               
Cow position:
               
chr24:28327263-28327007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 44
               

               
Conread position:
               
14-309
               

               
Cow position:
               
chr24:30545046-30544760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
14-320
               

               
Cow position:
               
chr24:31812008-31812325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
18-135
               

               
Cow position:
               
chr24:30226765-30226885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr24:27270604-27270727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
18-165
               

               
Cow position:
               
chr24:5152057-5152208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
18-195
               

               
Cow position:
               
chr24:27552721-27552895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 5
               

               
Conread position:
               
18-200
               

               
Cow position:
               
chr24:19633898-19634079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
18-253
               

               
Cow position:
               
chr24:15707618-15707386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
18-259
               

               
Cow position:
               
chr24:33724020-33723780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
18-266
               

               
Cow position:
               
chr24:19535427-19535184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
99, 76
               

               
Conread position:
               
18-273
               

               
Cow position:
               
chr24:17407216-17407468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
20-137
               

               
Cow position:
               
chr24:27874426-27874549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
20-261
               

               
Cow position:
               
chr24:18771361-18771113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
20-273
               

               
Cow position:
               
chr24:19800673-19800921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
97, 74
               

               
Conread position:
               
21-158
               

               
Cow position:
               
chr24:6340841-6340978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
21-170
               

               
Cow position:
               
chr24:12120690-12120840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
21-179
               

               
Cow position:
               
chr24:17567212-17567370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
21-198
               

               
Cow position:
               
chr24:18266340-18266158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
21-248
               

               
Cow position:
               
chr24:19179619-19179384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 114
               

               
Conread position:
               
21-253
               

               
Cow position:
               
chr24:7913830-7914065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
38, 108
               

               
Conread position:
               
21-265
               

               
Cow position:
               
chr24:37694979-37694741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
21-267
               

               
Cow position:
               
chr24:29586821-29587073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 85
               

               
Conread position:
               
21-268
               

               
Cow position:
               
chr24:6141132-6140877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
21-268
               

               
Cow position:
               
chr24:18975028-18975283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 156
               

               
Conread position:
               
21-268
               

               
Cow position:
               
chr24:26554773-26554523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
21-273
               

               
Cow position:
               
chr24:20250072-20249817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
21-273
               

               
Cow position:
               
chr24:27096511-27096768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
21-273
               

               
Cow position:
               
chr24:35332546-35332804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
21-316
               

               
Cow position:
               
chr24:6132045-6131747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
21-318
               

               
Cow position:
               
chr24:16509798-16510114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
96, 117
               

               
Conread position:
               
21-321
               

               
Cow position:
               
chr24:27608270-27607969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
21-360
               

               
Cow position:
               
chr24:17955615-17955275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
24-247
               

               
Cow position:
               
chr24:15373240-15373458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
24-255
               

               
Cow position:
               
chr24:17860424-17860197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
24-255
               

               
Cow position:
               
chr24:34742586-34742814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr24:2402543-2402294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr24:33230508-33230748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
24-272
               

               
Cow position:
               
chr24:24155674-24155435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
24-273
               

               
Cow position:
               
chr24:18343880-18344142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
24-273
               

               
Cow position:
               
chr24:42345174-42344918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
24-316
               

               
Cow position:
               
chr24:35675378-35675668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
25-140
               

               
Cow position:
               
chr24:27267463-27267582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
25-142
               

               
Cow position:
               
chr24:27719923-27719805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-143
               

               
Cow position:
               
chr24:18390457-18390338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
25-143
               

               
Cow position:
               
chr24:36486226-36486107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
25-167
               

               
Cow position:
               
chr24:27967910-27968057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-167
               

               
Cow position:
               
chr24:34315184-34315329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
25-167
               

               
Cow position:
               
chr24:39219011-39218867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 120
               

               
Conread position:
               
25-170
               

               
Cow position:
               
chr24:885854-885712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
25-172
               

               
Cow position:
               
chr24:35794904-35794757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-231
               

               
Cow position:
               
chr24:20024443-20024650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
25-238
               

               
Cow position:
               
chr24:39143440-39143656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
25-239
               

               
Cow position:
               
chr24:33222110-33221895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-245
               

               
Cow position:
               
chr24:27341188-27340968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
25-247
               

               
Cow position:
               
chr24:18970676-18970455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 112
               

               
Conread position:
               
25-247
               

               
Cow position:
               
chr24:29595979-29595756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
25-248
               

               
Cow position:
               
chr24:16895604-16895383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
25-248
               

               
Cow position:
               
chr24:35576703-35576485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
25-251
               

               
Cow position:
               
chr24:10125697-10125929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 214
               

               
Conread position:
               
25-253
               

               
Cow position:
               
chr24:9036028-9036245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
25-253
               

               
Cow position:
               
chr24:38347514-38347732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
25-254
               

               
Cow position:
               
chr24:11886993-11887217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr24:2111576-2111347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 119
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr24:16089068-16089289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr24:17104738-17104509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr24:20874512-20874742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr24:23187085-23186858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr24:28496751-28496521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
122, 34
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr24:29673351-29673583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
25-255
               

               
Cow position:
               
chr24:30229303-30229534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
25-258
               

               
Cow position:
               
chr24:33944236-33944465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
25-259
               

               
Cow position:
               
chr24:15861769-15861529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
25-259
               

               
Cow position:
               
chr24:19769325-19769554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
25-259
               

               
Cow position:
               
chr24:24457414-24457185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
25-259
               

               
Cow position:
               
chr24:28690523-28690749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
25-259
               

               
Cow position:
               
chr24:29781996-29782226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
25-259
               

               
Cow position:
               
chr24:33098660-33098408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
25-266
               

               
Cow position:
               
chr24:3493724-3493956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-266
               

               
Cow position:
               
chr24:22079292-22079532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
25-266
               

               
Cow position:
               
chr24:31159449-31159688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
25-267
               

               
Cow position:
               
chr24:40129954-40130202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
25-267
               

               
Cow position:
               
chr24:42825662-42825431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr24:11840010-11840261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 129
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr24:16994718-16994955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr24:17294360-17294124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
95, 162
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr24:20225573-20225810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr24:27039874-27040121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr24:27906270-27906512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr24:30484119-30483867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr24:32070798-32071035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr24:32204962-32204721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr24:34008746-34008499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
25-268
               

               
Cow position:
               
chr24:43364191-43364433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
92, 83
               

               
Conread position:
               
25-269
               

               
Cow position:
               
chr24:25092362-25092596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
25-272
               

               
Cow position:
               
chr24:25320825-25321063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr24:39440725-39440489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
25-276
               

               
Cow position:
               
chr24:5141776-5142025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-276
               

               
Cow position:
               
chr24:7476521-7476272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
25-280
               

               
Cow position:
               
chr24:12200581-12200324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
92, 253
               

               
Conread position:
               
25-280
               

               
Cow position:
               
chr24:41980837-41980576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 189
               

               
Conread position:
               
25-309
               

               
Cow position:
               
chr24:7917533-7917249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
29, 115
               

               
Conread position:
               
25-309
               

               
Cow position:
               
chr24:18999879-19000173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
25-309
               

               
Cow position:
               
chr24:28062784-28063076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
25-309
               

               
Cow position:
               
chr24:28721723-28722007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
25-316
               

               
Cow position:
               
chr24:28600032-28599734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
25-316
               

               
Cow position:
               
chr24:37037731-37038028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
25-325
               

               
Cow position:
               
chr24:39483309-39483609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
25-360
               

               
Cow position:
               
chr24:44041181-44040832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
34, 304
               

               
Conread position:
               
25-515
               

               
Cow position:
               
chr24:39493126-39493618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
92, 106
               

               
Conread position:
               
26-141
               

               
Cow position:
               
chr24:18405484-18405371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
26-167
               

               
Cow position:
               
chr24:18695452-18695592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 112
               

               
Conread position:
               
26-167
               

               
Cow position:
               
chr24:28023619-28023759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
26-172
               

               
Cow position:
               
chr24:24137024-24136883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
26-191
               

               
Cow position:
               
chr24:14729231-14729400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
26-206
               

               
Cow position:
               
chr24:36554999-36554822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr24:28253539-28253734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
26-234
               

               
Cow position:
               
chr24:3430567-3430773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
26-247
               

               
Cow position:
               
chr24:30314199-30313973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
26-255
               

               
Cow position:
               
chr24:352772-352546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
26-255
               

               
Cow position:
               
chr24:6102657-6102888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
26-255
               

               
Cow position:
               
chr24:18331557-18331781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
26-255
               

               
Cow position:
               
chr24:43432625-43432851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
26-258
               

               
Cow position:
               
chr24:17832981-17832757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
26-259
               

               
Cow position:
               
chr24:33465775-33465556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
26-277
               

               
Cow position:
               
chr24:18485164-18484913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
26-320
               

               
Cow position:
               
chr24:211818-212110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
26-374
               

               
Cow position:
               
chr24:2970773-2970421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
27-165
               

               
Cow position:
               
chr24:14171860-14171717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
27-201
               

               
Cow position:
               
chr24:27052661-27052487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
27-242
               

               
Cow position:
               
chr24:37650504-37650722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
27-268
               

               
Cow position:
               
chr24:18741737-18741498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 117
               

               
Conread position:
               
27-276
               

               
Cow position:
               
chr24:5754672-5754918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
230, 36
               

               
Conread position:
               
27-309
               

               
Cow position:
               
chr24:41423443-41423726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
28-254
               

               
Cow position:
               
chr24:27726178-27725952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
28-268
               

               
Cow position:
               
chr24:43683637-43683389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
28-268
               

               
Cow position:
               
chr24:44987548-44987301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
28-269
               

               
Cow position:
               
chr24:31324116-31324359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
28-273
               

               
Cow position:
               
chr24:44809082-44809329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 203
               

               
Conread position:
               
29-148
               

               
Cow position:
               
chr24:6450332-6450453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
29-167
               

               
Cow position:
               
chr24:27149233-27149372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
29-195
               

               
Cow position:
               
chr24:42007575-42007741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
87, 113
               

               
Conread position:
               
29-253
               

               
Cow position:
               
chr24:3152745-3152519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
29-255
               

               
Cow position:
               
chr24:15508702-15508483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
29-255
               

               
Cow position:
               
chr24:28990400-28990622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
29-259
               

               
Cow position:
               
chr24:36404308-36404078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
29-268
               

               
Cow position:
               
chr24:14648512-14648285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
29-268
               

               
Cow position:
               
chr24:18017063-18017301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 112
               

               
Conread position:
               
29-268
               

               
Cow position:
               
chr24:32370083-32369841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 102
               

               
Conread position:
               
29-285
               

               
Cow position:
               
chr24:201798-201545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
29-316
               

               
Cow position:
               
chr24:30897702-30897425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
30-165
               

               
Cow position:
               
chr24:35073929-35074065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 108
               

               
Conread position:
               
30-268
               

               
Cow position:
               
chr24:36173944-36173708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
30-318
               

               
Cow position:
               
chr24:24755283-24755573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
30-322
               

               
Cow position:
               
chr24:15246797-15246508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 29
               

               
Conread position:
               
31-253
               

               
Cow position:
               
chr24:36008321-36008545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 99
               

               
Conread position:
               
31-268
               

               
Cow position:
               
chr24:20943005-20943236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
35-250
               

               
Cow position:
               
chr24:10841374-10841148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 115
               

               
Conread position:
               
35-266
               

               
Cow position:
               
chr24:5633191-5632960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 107
               

               
Conread position:
               
36-273
               

               
Cow position:
               
chr24:39289895-39290124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
37-268
               

               
Cow position:
               
chr24:22225025-22225261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 93
               

               
Conread position:
               
37-268
               

               
Cow position:
               
chr24:26929101-26928870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 104
               

               
Conread position:
               
37-268
               

               
Cow position:
               
chr24:39159702-39159476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
37-320
               

               
Cow position:
               
chr24:15057245-15057527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
37-350
               

               
Cow position:
               
chr24:32054503-32054824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 106
               

               
Conread position:
               
38-285
               

               
Cow position:
               
chr24:17752268-17752020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
38-310
               

               
Cow position:
               
chr24:41755708-41755981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
223, 21
               

               
Conread position:
               
49-316
               

               
Cow position:
               
chr24:28233904-28234177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
216, 68
               

               
Conread position:
               
51-138
               

               
Cow position:
               
chr24:27810044-27810133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
51-183
               

               
Cow position:
               
chr24:31382754-31382890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
51-247
               

               
Cow position:
               
chr24:40837635-40837825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
51-252
               

               
Cow position:
               
chr24:19466064-19465859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
51-358
               

               
Cow position:
               
chr24:41985847-41986162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 130
               

               
Conread position:
               
52-268
               

               
Cow position:
               
chr24:24662271-24662057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
53-268
               

               
Cow position:
               
chr24:16645464-16645246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
57-273
               

               
Cow position:
               
chr24:23863771-23863550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
63-330
               

               
Cow position:
               
chr24:27713535-27713260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
66-268
               

               
Cow position:
               
chr24:34272684-34272884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
128, 60
               

               
Conread position:
               
67-321
               

               
Cow position:
               
chr24:29561701-29561437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
68-318
               

               
Cow position:
               
chr24:39523573-39523311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
69-268
               

               
Cow position:
               
chr24:39791414-39791615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
72-273
               

               
Cow position:
               
chr24:37267539-37267741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
47, 58
               

               
Conread position:
               
78-316
               

               
Cow position:
               
chr24:37975097-37974847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
83-273
               

               
Cow position:
               
chr24:3656477-3656287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 20
               
Show alignments to all cow chromosomes.