Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Thy1-THY010205F03.5
        

               Conread position:
               1-266
               

               Cow position:
               chr3:48252692-48252957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-162
               

               Cow position:
               chr3:80581475-80581637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               114, 26
               

               Conread position:
               3-255
               

               Cow position:
               chr3:55189946-55189692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               19, 50
               

               Conread position:
               3-255
               

               Cow position:
               chr3:76015103-76015353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               3-267
               

               Cow position:
               chr3:210127-210392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 90
               

               Conread position:
               3-268
               

               Cow position:
               chr3:77271463-77271204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               5-246
               

               Cow position:
               chr3:81359301-81359055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 139
               

               Conread position:
               13-145
               

               Cow position:
               chr3:59514925-59515058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               13-150
               

               Cow position:
               chr3:75046055-75045916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               102, 7
               

               Conread position:
               13-247
               

               Cow position:
               chr3:5100947-5100719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               13-258
               

               Cow position:
               chr3:55319083-55318833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               9, 62
               

               Conread position:
               13-309
               

               Cow position:
               chr3:59000928-59000633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               14-187
               

               Cow position:
               chr3:41367163-41366987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               8, 50
               

               Conread position:
               14-268
               

               Cow position:
               chr3:12705725-12705469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               8, 45
               

               Conread position:
               14-268
               

               Cow position:
               chr3:38828587-38828831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 113
               

               Conread position:
               14-307
               

               Cow position:
               chr3:5365492-5365793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 133
               

               Conread position:
               14-309
               

               Cow position:
               chr3:7566598-7566291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               102, 68
               

               Conread position:
               16-273
               

               Cow position:
               chr3:15954264-15954006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               18-154
               

               Cow position:
               chr3:78739682-78739818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               99, 40
               

               Conread position:
               18-250
               

               Cow position:
               chr3:80053718-80053487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 135
               

               Conread position:
               18-251
               

               Cow position:
               chr3:75687613-75687380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               101, 125
               

               Conread position:
               18-268
               

               Cow position:
               chr3:14552704-14552949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               98, 31
               

               Conread position:
               18-268
               

               Cow position:
               chr3:53318229-53318474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               99, 126
               

               Conread position:
               18-268
               

               Cow position:
               chr3:57273892-57274135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               204, 41
               

               Conread position:
               18-268
               

               Cow position:
               chr3:67704368-67704620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               99, 40
               

               Conread position:
               18-273
               

               Cow position:
               chr3:44837555-44837297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               38, 66
               

               Conread position:
               18-274
               

               Cow position:
               chr3:7940730-7940478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               99, 41
               

               Conread position:
               18-295
               

               Cow position:
               chr3:65058528-65058800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               98, 68
               

               Conread position:
               18-309
               

               Cow position:
               chr3:18686733-18687031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               99, 42
               

               Conread position:
               18-316
               

               Cow position:
               chr3:27274357-27274664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               101, 40
               

               Conread position:
               18-316
               

               Cow position:
               chr3:64281106-64280801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               99, 32
               

               Conread position:
               18-321
               

               Cow position:
               chr3:80564789-80565104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               99, 41
               

               Conread position:
               18-330
               

               Cow position:
               chr3:27697153-27696844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               40, 111
               

               Conread position:
               20-153
               

               Cow position:
               chr3:48578664-48578794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               96, 37
               

               Conread position:
               20-267
               

               Cow position:
               chr3:6689826-6690073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               36, 112
               

               Conread position:
               20-268
               

               Cow position:
               chr3:14465879-14465632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               97, 34
               

               Conread position:
               20-269
               

               Cow position:
               chr3:32787288-32787535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               20-273
               

               Cow position:
               chr3:8393765-8394021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               97, 9
               

               Conread position:
               20-305
               

               Cow position:
               chr3:5374163-5374437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               96, 9
               

               Conread position:
               20-307
               

               Cow position:
               chr3:45647963-45648241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 9
               

               Conread position:
               21-155
               

               Cow position:
               chr3:48296538-48296673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               21-165
               

               Cow position:
               chr3:28692605-28692458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               21-187
               

               Cow position:
               chr3:61024475-61024308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               21-190
               

               Cow position:
               chr3:30358807-30358637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               96, 118
               

               Conread position:
               21-216
               

               Cow position:
               chr3:45524092-45524289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               21-220
               

               Cow position:
               chr3:55947408-55947610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               21-237
               

               Cow position:
               chr3:63315964-63316175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               118, 70
               

               Conread position:
               21-247
               

               Cow position:
               chr3:14633155-14632930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               99, 24
               

               Conread position:
               21-253
               

               Cow position:
               chr3:31298327-31298104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 110
               

               Conread position:
               21-253
               

               Cow position:
               chr3:53572924-53572693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               21-253
               

               Cow position:
               chr3:55434160-55434388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               34, 19
               

               Conread position:
               21-253
               

               Cow position:
               chr3:75727756-75727523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               96, 120
               

               Conread position:
               21-255
               

               Cow position:
               chr3:4319543-4319772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               96, 55
               

               Conread position:
               21-266
               

               Cow position:
               chr3:13302020-13301778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               95, 107
               

               Conread position:
               21-268
               

               Cow position:
               chr3:14263221-14263466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 108
               

               Conread position:
               21-268
               

               Cow position:
               chr3:15052123-15051876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               96, 37
               

               Conread position:
               21-268
               

               Cow position:
               chr3:72473740-72473989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               96, 128
               

               Conread position:
               21-269
               

               Cow position:
               chr3:188689-188947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               21-269
               

               Cow position:
               chr3:5044977-5044738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 112
               

               Conread position:
               21-269
               

               Cow position:
               chr3:61143928-61144169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               21-269
               

               Cow position:
               chr3:79592056-79591816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               21-269
               

               Cow position:
               chr3:83798010-83797759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               21-273
               

               Cow position:
               chr3:13890296-13890556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               38, 117
               

               Conread position:
               21-273
               

               Cow position:
               chr3:18144288-18144039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               21-273
               

               Cow position:
               chr3:23876823-23877079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               96, 107
               

               Conread position:
               21-273
               

               Cow position:
               chr3:25690618-25690872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               31, 108
               

               Conread position:
               21-273
               

               Cow position:
               chr3:54050190-54049952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               21-273
               

               Cow position:
               chr3:57754651-57754397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               36, 128
               

               Conread position:
               21-273
               

               Cow position:
               chr3:67698108-67698355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               96, 37
               

               Conread position:
               21-273
               

               Cow position:
               chr3:81507283-81507032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 80
               

               Conread position:
               21-277
               

               Cow position:
               chr3:83815960-83815704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               96, 24
               

               Conread position:
               21-306
               

               Cow position:
               chr3:13899620-13899327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 118
               

               Conread position:
               21-309
               

               Cow position:
               chr3:6873415-6873133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               137, 45
               

               Conread position:
               21-316
               

               Cow position:
               chr3:26739591-26739287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               36, 229
               

               Conread position:
               21-321
               

               Cow position:
               chr3:59366382-59366676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               96, 125
               

               Conread position:
               22-255
               

               Cow position:
               chr3:26219221-26218990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               7, 37
               

               Conread position:
               24-150
               

               Cow position:
               chr3:26970659-26970787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               24-163
               

               Cow position:
               chr3:15752799-15752662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               24-169
               

               Cow position:
               chr3:49218483-49218339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 35
               

               Conread position:
               24-170
               

               Cow position:
               chr3:50614469-50614617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               24-187
               

               Cow position:
               chr3:27286061-27286222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 95
               

               Conread position:
               24-227
               

               Cow position:
               chr3:43528405-43528199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               93, 42
               

               Conread position:
               24-247
               

               Cow position:
               chr3:72018947-72019169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               33, 94
               

               Conread position:
               24-252
               

               Cow position:
               chr3:12712087-12711857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               24-255
               

               Cow position:
               chr3:30222017-30222252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               24-259
               

               Cow position:
               chr3:26553884-26553650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 151
               

               Conread position:
               24-266
               

               Cow position:
               chr3:55272213-55271972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               96, 14
               

               Conread position:
               24-268
               

               Cow position:
               chr3:29891581-29891335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               91, 104
               

               Conread position:
               24-268
               

               Cow position:
               chr3:52017590-52017845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               24-268
               

               Cow position:
               chr3:55835993-55835747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 34
               

               Conread position:
               24-268
               

               Cow position:
               chr3:79292661-79292902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               93, 61
               

               Conread position:
               24-269
               

               Cow position:
               chr3:21547266-21547026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               30, 68
               

               Conread position:
               24-273
               

               Cow position:
               chr3:18497850-18498095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 81
               

               Conread position:
               24-273
               

               Cow position:
               chr3:26489253-26489001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 130
               

               Conread position:
               24-273
               

               Cow position:
               chr3:49461101-49460847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               24-274
               

               Cow position:
               chr3:3913619-3913362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               24-277
               

               Cow position:
               chr3:17447776-17447531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               233, 16
               

               Conread position:
               24-316
               

               Cow position:
               chr3:83845736-83846032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               56, 34
               

               Conread position:
               25-115
               

               Cow position:
               chr3:18854925-18855017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               25-129
               

               Cow position:
               chr3:57764060-57764165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               25-133
               

               Cow position:
               chr3:22872219-22872105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               25-135
               

               Cow position:
               chr3:27109068-27108960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               25-135
               

               Cow position:
               chr3:61361236-61361348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 104
               

               Conread position:
               25-137
               

               Cow position:
               chr3:8717082-8717196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               30, 105
               

               Conread position:
               25-139
               

               Cow position:
               chr3:3638019-3638135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               25-141
               

               Cow position:
               chr3:81940088-81940206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               25-142
               

               Cow position:
               chr3:58540696-58540576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               25-152
               

               Cow position:
               chr3:15192397-15192527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               25-163
               

               Cow position:
               chr3:42588183-42588329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               25-165
               

               Cow position:
               chr3:17952488-17952629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               92, 118
               

               Conread position:
               25-167
               

               Cow position:
               chr3:4087335-4087186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               25-167
               

               Cow position:
               chr3:5899654-5899798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 33
               

               Conread position:
               25-167
               

               Cow position:
               chr3:9843420-9843560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-167
               

               Cow position:
               chr3:14601880-14601738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               92, 113
               

               Conread position:
               25-167
               

               Cow position:
               chr3:25059910-25060053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               91, 119
               

               Conread position:
               25-167
               

               Cow position:
               chr3:34294452-34294309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 33
               

               Conread position:
               25-167
               

               Cow position:
               chr3:49731808-49731666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 19
               

               Conread position:
               25-170
               

               Cow position:
               chr3:42483733-42483884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               25-171
               

               Cow position:
               chr3:49455070-49455215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               92, 113
               

               Conread position:
               25-172
               

               Cow position:
               chr3:61840110-61840257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 32
               

               Conread position:
               25-172
               

               Cow position:
               chr3:65800428-65800570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               106, 33
               

               Conread position:
               25-172
               

               Cow position:
               chr3:78946000-78945853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               92, 42
               

               Conread position:
               25-187
               

               Cow position:
               chr3:59271374-59271536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-187
               

               Cow position:
               chr3:63861064-63860896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               26, 83
               

               Conread position:
               25-188
               

               Cow position:
               chr3:83708138-83707979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               92, 66
               

               Conread position:
               25-194
               

               Cow position:
               chr3:59885217-59885393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               25-197
               

               Cow position:
               chr3:84000445-84000616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 111
               

               Conread position:
               25-221
               

               Cow position:
               chr3:70631851-70632048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               113, 35
               

               Conread position:
               25-232
               

               Cow position:
               chr3:33698558-33698769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               25-234
               

               Cow position:
               chr3:19708272-19708068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               92, 113
               

               Conread position:
               25-242
               

               Cow position:
               chr3:73759683-73759469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               94, 36
               

               Conread position:
               25-244
               

               Cow position:
               chr3:71430375-71430154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               25-245
               

               Cow position:
               chr3:58960756-58960537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 108
               

               Conread position:
               25-246
               

               Cow position:
               chr3:70899728-70899943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               25-246
               

               Cow position:
               chr3:80071959-80072181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               25-248
               

               Cow position:
               chr3:23471631-23471405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               92, 65
               

               Conread position:
               25-250
               

               Cow position:
               chr3:39171650-39171430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               92, 26
               

               Conread position:
               25-250
               

               Cow position:
               chr3:55106606-55106380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 103
               

               Conread position:
               25-251
               

               Cow position:
               chr3:56476513-56476739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               25-251
               

               Cow position:
               chr3:66610010-66609787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-251
               

               Cow position:
               chr3:70565905-70565681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 38
               

               Conread position:
               25-252
               

               Cow position:
               chr3:34937676-34937902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               92, 36
               

               Conread position:
               25-252
               

               Cow position:
               chr3:45279297-45279524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 88
               

               Conread position:
               25-252
               

               Cow position:
               chr3:67930349-67930129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               91, 32
               

               Conread position:
               25-253
               

               Cow position:
               chr3:39661620-39661398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 80
               

               Conread position:
               25-253
               

               Cow position:
               chr3:54506542-54506766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               25-255
               

               Cow position:
               chr3:23105533-23105301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               25-255
               

               Cow position:
               chr3:50768515-50768740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               95, 38
               

               Conread position:
               25-255
               

               Cow position:
               chr3:54945961-54946192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               25-255
               

               Cow position:
               chr3:62046495-62046725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-255
               

               Cow position:
               chr3:74079806-74079576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-257
               

               Cow position:
               chr3:53221847-53222076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               25-258
               

               Cow position:
               chr3:55124445-55124216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 41
               

               Conread position:
               25-259
               

               Cow position:
               chr3:17895679-17895913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               91, 34
               

               Conread position:
               25-259
               

               Cow position:
               chr3:63269058-63269288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               25-259
               

               Cow position:
               chr3:78896482-78896712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               25-265
               

               Cow position:
               chr3:53384451-53384209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               84, 51
               

               Conread position:
               25-266
               

               Cow position:
               chr3:30179913-30180158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               25-266
               

               Cow position:
               chr3:36375711-36375468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               25-266
               

               Cow position:
               chr3:55970338-55970579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               92, 117
               

               Conread position:
               25-266
               

               Cow position:
               chr3:71237989-71238225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-267
               

               Cow position:
               chr3:53270661-53270903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               94, 113
               

               Conread position:
               25-267
               

               Cow position:
               chr3:70334871-70334622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 121
               

               Conread position:
               25-267
               

               Cow position:
               chr3:75711144-75711380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               25-268
               

               Cow position:
               chr3:1830736-1830502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-268
               

               Cow position:
               chr3:2025017-2025272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               25-268
               

               Cow position:
               chr3:2506644-2506405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               92, 141
               

               Conread position:
               25-268
               

               Cow position:
               chr3:8393183-8393419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               25-268
               

               Cow position:
               chr3:10347188-10347429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               25-268
               

               Cow position:
               chr3:11987160-11987403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               92, 119
               

               Conread position:
               25-268
               

               Cow position:
               chr3:17456432-17456194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               92, 63
               

               Conread position:
               25-268
               

               Cow position:
               chr3:26920741-26920984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               92, 72
               

               Conread position:
               25-268
               

               Cow position:
               chr3:26960758-26960514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               92, 118
               

               Conread position:
               25-268
               

               Cow position:
               chr3:28898390-28898149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 112
               

               Conread position:
               25-268
               

               Cow position:
               chr3:29596224-29596463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               25-268
               

               Cow position:
               chr3:34669895-34669659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               91, 112
               

               Conread position:
               25-268
               

               Cow position:
               chr3:42423501-42423254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               87, 196
               

               Conread position:
               25-268
               

               Cow position:
               chr3:45211130-45211375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               27, 66
               

               Conread position:
               25-268
               

               Cow position:
               chr3:48241449-48241688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-268
               

               Cow position:
               chr3:49327774-49328018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-268
               

               Cow position:
               chr3:49650218-49650462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 103
               

               Conread position:
               25-268
               

               Cow position:
               chr3:53113006-53113249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-268
               

               Cow position:
               chr3:54100890-54100652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               17, 116
               

               Conread position:
               25-268
               

               Cow position:
               chr3:55085350-55085095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               25-268
               

               Cow position:
               chr3:55109782-55109539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               95, 22
               

               Conread position:
               25-268
               

               Cow position:
               chr3:57624296-57624538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 49
               

               Conread position:
               25-268
               

               Cow position:
               chr3:58969068-58968829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               22, 34
               

               Conread position:
               25-268
               

               Cow position:
               chr3:59621810-59621574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               92, 11
               

               Conread position:
               25-268
               

               Cow position:
               chr3:65968991-65969241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               25-268
               

               Cow position:
               chr3:66884108-66883870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               92, 101
               

               Conread position:
               25-268
               

               Cow position:
               chr3:66900909-66900659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               35, 81
               

               Conread position:
               25-268
               

               Cow position:
               chr3:70401735-70401970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               92, 35
               

               Conread position:
               25-268
               

               Cow position:
               chr3:70762290-70762049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               25-268
               

               Cow position:
               chr3:73394953-73395190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               92, 112
               

               Conread position:
               25-268
               

               Cow position:
               chr3:73443254-73443022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               25-268
               

               Cow position:
               chr3:77365466-77365216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               91, 130
               

               Conread position:
               25-268
               

               Cow position:
               chr3:81471268-81471022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 122
               

               Conread position:
               25-269
               

               Cow position:
               chr3:19198820-19199060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               101, 36
               

               Conread position:
               25-269
               

               Cow position:
               chr3:61539633-61539876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               32, 112
               

               Conread position:
               25-271
               

               Cow position:
               chr3:48810804-48810567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               238, 33
               

               Conread position:
               25-272
               

               Cow position:
               chr3:20129775-20130013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               25-272
               

               Cow position:
               chr3:61857333-61857584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               32, 187
               

               Conread position:
               25-272
               

               Cow position:
               chr3:79092562-79092314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 106
               

               Conread position:
               25-273
               

               Cow position:
               chr3:2216196-2216447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               25-273
               

               Cow position:
               chr3:2393132-2392889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 113
               

               Conread position:
               25-273
               

               Cow position:
               chr3:8060960-8061205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               25-273
               

               Cow position:
               chr3:25944914-25945172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               25-273
               

               Cow position:
               chr3:31206705-31206955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               25-273
               

               Cow position:
               chr3:46901029-46901277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               25-273
               

               Cow position:
               chr3:53095103-53094852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 111
               

               Conread position:
               25-273
               

               Cow position:
               chr3:60933249-60933496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 71
               

               Conread position:
               25-274
               

               Cow position:
               chr3:53592864-53592609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 136
               

               Conread position:
               25-276
               

               Cow position:
               chr3:5097036-5097290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               25-276
               

               Cow position:
               chr3:75158192-75158438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               25-276
               

               Cow position:
               chr3:77188270-77188519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               84, 70
               

               Conread position:
               25-277
               

               Cow position:
               chr3:116030-116274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               92, 60
               

               Conread position:
               25-277
               

               Cow position:
               chr3:53150162-53150415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               25-277
               

               Cow position:
               chr3:65413447-65413195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               92, 36
               

               Conread position:
               25-278
               

               Cow position:
               chr3:26874423-26874675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               25-288
               

               Cow position:
               chr3:23169233-23168972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               25-294
               

               Cow position:
               chr3:72675925-72676189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               25-307
               

               Cow position:
               chr3:70895883-70896167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               180, 38
               

               Conread position:
               25-309
               

               Cow position:
               chr3:3985160-3985446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               92, 34
               

               Conread position:
               25-309
               

               Cow position:
               chr3:24352693-24352970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               25-309
               

               Cow position:
               chr3:28908369-28908086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-309
               

               Cow position:
               chr3:51234264-51233974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               92, 122
               

               Conread position:
               25-309
               

               Cow position:
               chr3:54434808-54435098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               91, 38
               

               Conread position:
               25-309
               

               Cow position:
               chr3:75853498-75853202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               68, 27
               

               Conread position:
               25-310
               

               Cow position:
               chr3:9641398-9641686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               25-310
               

               Cow position:
               chr3:43233340-43233634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               241, 101
               

               Conread position:
               25-314
               

               Cow position:
               chr3:53739353-53739060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-315
               

               Cow position:
               chr3:17957295-17957598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 105
               

               Conread position:
               25-315
               

               Cow position:
               chr3:26903948-26904236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               212, 78
               

               Conread position:
               25-315
               

               Cow position:
               chr3:30463333-30463039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 34
               

               Conread position:
               25-316
               

               Cow position:
               chr3:18393555-18393265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               192, 33
               

               Conread position:
               25-316
               

               Cow position:
               chr3:29887589-29887300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               120, 33
               

               Conread position:
               25-316
               

               Cow position:
               chr3:39970035-39969726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               25-316
               

               Cow position:
               chr3:44932345-44932649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               25-316
               

               Cow position:
               chr3:68146010-68145714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               214, 94
               

               Conread position:
               25-316
               

               Cow position:
               chr3:74533185-74533471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               25-316
               

               Cow position:
               chr3:74754161-74754452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               25-318
               

               Cow position:
               chr3:55819580-55819888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               34, 224
               

               Conread position:
               25-320
               

               Cow position:
               chr3:17937002-17936706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               25-321
               

               Cow position:
               chr3:55712262-55712573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               25-328
               

               Cow position:
               chr3:15751889-15751565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               91, 103
               

               Conread position:
               25-330
               

               Cow position:
               chr3:68708171-68707872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               120, 38
               

               Conread position:
               25-330
               

               Cow position:
               chr3:68881279-68880981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               94, 35
               

               Conread position:
               25-365
               

               Cow position:
               chr3:525183-525517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               25-394
               

               Cow position:
               chr3:73764363-73763997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               83, 63
               

               Conread position:
               26-145
               

               Cow position:
               chr3:6853674-6853551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               26-166
               

               Cow position:
               chr3:29807299-29807438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               90, 32
               

               Conread position:
               26-166
               

               Cow position:
               chr3:29813078-29813217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               90, 32
               

               Conread position:
               26-166
               

               Cow position:
               chr3:45312882-45313023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               31, 79
               

               Conread position:
               26-167
               

               Cow position:
               chr3:27212195-27212337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               91, 32
               

               Conread position:
               26-167
               

               Cow position:
               chr3:49140208-49140066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 32
               

               Conread position:
               26-170
               

               Cow position:
               chr3:21693779-21693925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               33, 103
               

               Conread position:
               26-172
               

               Cow position:
               chr3:83201690-83201547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               26-247
               

               Cow position:
               chr3:56541-56324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               91, 34
               

               Conread position:
               26-247
               

               Cow position:
               chr3:31047117-31046899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               91, 32
               

               Conread position:
               26-247
               

               Cow position:
               chr3:82461011-82461232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               90, 112
               

               Conread position:
               26-253
               

               Cow position:
               chr3:74878758-74878530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               26-255
               

               Cow position:
               chr3:23445060-23444827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               91, 78
               

               Conread position:
               26-255
               

               Cow position:
               chr3:59799081-59799309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               26-259
               

               Cow position:
               chr3:53046825-53046598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               26-264
               

               Cow position:
               chr3:26981898-26982128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               33, 127
               

               Conread position:
               26-268
               

               Cow position:
               chr3:3738322-3738555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 43
               

               Conread position:
               26-268
               

               Cow position:
               chr3:14626324-14626076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               90, 105
               

               Conread position:
               26-268
               

               Cow position:
               chr3:23920596-23920355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               91, 115
               

               Conread position:
               26-268
               

               Cow position:
               chr3:31309521-31309280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               104, 117
               

               Conread position:
               26-268
               

               Cow position:
               chr3:31850536-31850303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               91, 71
               

               Conread position:
               26-268
               

               Cow position:
               chr3:49790977-49790738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 111
               

               Conread position:
               26-268
               

               Cow position:
               chr3:51578486-51578252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               94, 31
               

               Conread position:
               26-268
               

               Cow position:
               chr3:56059640-56059885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               26-268
               

               Cow position:
               chr3:68616491-68616256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               26-268
               

               Cow position:
               chr3:72390916-72391156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               26-268
               

               Cow position:
               chr3:83215087-83215336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               26-268
               

               Cow position:
               chr3:83490917-83491159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 113
               

               Conread position:
               26-268
               

               Cow position:
               chr3:84597126-84596891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               151, 32
               

               Conread position:
               26-272
               

               Cow position:
               chr3:79902337-79902573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 93
               

               Conread position:
               26-276
               

               Cow position:
               chr3:67929430-67929178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               26, 104
               

               Conread position:
               26-277
               

               Cow position:
               chr3:13507300-13507552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               26-309
               

               Cow position:
               chr3:68586855-68587148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               90, 25
               

               Conread position:
               26-316
               

               Cow position:
               chr3:22232818-22232530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               26-316
               

               Cow position:
               chr3:26065837-26066123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               26-320
               

               Cow position:
               chr3:45647514-45647805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               26-372
               

               Cow position:
               chr3:15228991-15228638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 84
               

               Conread position:
               27-241
               

               Cow position:
               chr3:83727412-83727204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               27-243
               

               Cow position:
               chr3:4457237-4457022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               27-255
               

               Cow position:
               chr3:11711792-11712026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               27-255
               

               Cow position:
               chr3:73467457-73467692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               27-267
               

               Cow position:
               chr3:52863350-52863111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               89, 120
               

               Conread position:
               27-267
               

               Cow position:
               chr3:76268146-76267902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               27-268
               

               Cow position:
               chr3:68583168-68582926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               176, 97
               

               Conread position:
               27-269
               

               Cow position:
               chr3:74088335-74088105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               30, 63
               

               Conread position:
               27-278
               

               Cow position:
               chr3:44101804-44102050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               32, 105
               

               Conread position:
               27-316
               

               Cow position:
               chr3:76922828-76922537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               27-319
               

               Cow position:
               chr3:14598785-14599070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               28-145
               

               Cow position:
               chr3:44623049-44622931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               89, 32
               

               Conread position:
               28-255
               

               Cow position:
               chr3:59884237-59884008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               89, 121
               

               Conread position:
               28-266
               

               Cow position:
               chr3:18459686-18459456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               87, 102
               

               Conread position:
               28-269
               

               Cow position:
               chr3:59630666-59630438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 32
               

               Conread position:
               28-273
               

               Cow position:
               chr3:79220686-79220937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               29, 128
               

               Conread position:
               28-316
               

               Cow position:
               chr3:4050028-4050318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               26, 111
               

               Conread position:
               29-143
               

               Cow position:
               chr3:55063031-55062917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 57
               

               Conread position:
               29-145
               

               Cow position:
               chr3:15661866-15661746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               29-149
               

               Cow position:
               chr3:80081986-80081865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               87, 29
               

               Conread position:
               29-165
               

               Cow position:
               chr3:7858201-7858343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               29-167
               

               Cow position:
               chr3:22820405-22820545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               90, 22
               

               Conread position:
               29-172
               

               Cow position:
               chr3:73590162-73590016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               88, 30
               

               Conread position:
               29-183
               

               Cow position:
               chr3:16362900-16362746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 115
               

               Conread position:
               29-199
               

               Cow position:
               chr3:15859830-15859661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 31
               

               Conread position:
               29-220
               

               Cow position:
               chr3:39328231-39328426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               29-225
               

               Cow position:
               chr3:69849669-69849480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               29-246
               

               Cow position:
               chr3:76713489-76713273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 115
               

               Conread position:
               29-255
               

               Cow position:
               chr3:50069601-50069824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               29-265
               

               Cow position:
               chr3:75050789-75050547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               29-268
               

               Cow position:
               chr3:2680353-2680587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               88, 101
               

               Conread position:
               29-268
               

               Cow position:
               chr3:57760335-57760572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               86, 109
               

               Conread position:
               29-268
               

               Cow position:
               chr3:74502485-74502251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 88
               

               Conread position:
               29-273
               

               Cow position:
               chr3:64526684-64526926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               5, 23
               

               Conread position:
               29-295
               

               Cow position:
               chr3:17935097-17934836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               234, 29
               

               Conread position:
               29-309
               

               Cow position:
               chr3:60597379-60597667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               88, 57
               

               Conread position:
               29-316
               

               Cow position:
               chr3:24872552-24872832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               87, 29
               

               Conread position:
               30-170
               

               Cow position:
               chr3:49230854-49230994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               97, 113
               

               Conread position:
               30-227
               

               Cow position:
               chr3:35005618-35005809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               87, 27
               

               Conread position:
               30-268
               

               Cow position:
               chr3:15388053-15388293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               152, 66
               

               Conread position:
               30-268
               

               Cow position:
               chr3:18066973-18067206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               87, 28
               

               Conread position:
               30-268
               

               Cow position:
               chr3:38691571-38691332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               10, 109
               

               Conread position:
               30-277
               

               Cow position:
               chr3:15506289-15506532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               120, 28
               

               Conread position:
               30-316
               

               Cow position:
               chr3:58765239-58764949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               87, 30
               

               Conread position:
               31-294
               

               Cow position:
               chr3:59101667-59101927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               88, 172
               

               Conread position:
               31-309
               

               Cow position:
               chr3:59597022-59597303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 28
               

               Conread position:
               33-229
               

               Cow position:
               chr3:2851054-2850863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               33-255
               

               Cow position:
               chr3:53790696-53790476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               83, 25
               

               Conread position:
               33-268
               

               Cow position:
               chr3:9663331-9663098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               84, 60
               

               Conread position:
               33-268
               

               Cow position:
               chr3:21015125-21014882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               33-273
               

               Cow position:
               chr3:59034874-59035119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 116
               

               Conread position:
               33-316
               

               Cow position:
               chr3:79094207-79093921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               34-268
               

               Cow position:
               chr3:15153534-15153765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               104, 24
               

               Conread position:
               34-268
               

               Cow position:
               chr3:77581950-77582179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 104
               

               Conread position:
               35-266
               

               Cow position:
               chr3:66292334-66292103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               35-268
               

               Cow position:
               chr3:19585704-19585937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 28
               

               Conread position:
               35-268
               

               Cow position:
               chr3:24468536-24468311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               81, 16
               

               Conread position:
               35-268
               

               Cow position:
               chr3:71231238-71231469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               29, 105
               

               Conread position:
               36-221
               

               Cow position:
               chr3:63179704-63179884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 84
               

               Conread position:
               36-233
               

               Cow position:
               chr3:32184177-32183979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               81, 24
               

               Conread position:
               36-252
               

               Cow position:
               chr3:57577539-57577755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               36-277
               

               Cow position:
               chr3:54374016-54373778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 94
               

               Conread position:
               36-316
               

               Cow position:
               chr3:61894326-61894044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 58
               

               Conread position:
               37-266
               

               Cow position:
               chr3:38035747-38035520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               88, 110
               

               Conread position:
               37-267
               

               Cow position:
               chr3:6772748-6772519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               83, 100
               

               Conread position:
               37-268
               

               Cow position:
               chr3:59718687-59718922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               79, 91
               

               Conread position:
               37-268
               

               Cow position:
               chr3:71478436-71478671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               78, 108
               

               Conread position:
               37-268
               

               Cow position:
               chr3:74119597-74119355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               37-276
               

               Cow position:
               chr3:20675030-20674796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               39-287
               

               Cow position:
               chr3:71238317-71238563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               22, 106
               

               Conread position:
               40-264
               

               Cow position:
               chr3:19793745-19793521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 82
               

               Conread position:
               40-268
               

               Cow position:
               chr3:3032252-3032481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               77, 165
               

               Conread position:
               40-268
               

               Cow position:
               chr3:29946242-29946461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               40-273
               

               Cow position:
               chr3:11200136-11199900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               12, 90
               

               Conread position:
               40-315
               

               Cow position:
               chr3:46541980-46541714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               77, 18
               

               Conread position:
               40-316
               

               Cow position:
               chr3:23408504-23408226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               77, 18
               

               Conread position:
               42-268
               

               Cow position:
               chr3:11254312-11254094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               44-247
               

               Cow position:
               chr3:59473972-59474175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               44-268
               

               Cow position:
               chr3:5366622-5366842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               71, 17
               

               Conread position:
               45-255
               

               Cow position:
               chr3:24935223-24935426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               45-268
               

               Cow position:
               chr3:49678978-49679206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               50, 108
               

               Conread position:
               45-273
               

               Cow position:
               chr3:24548993-24548758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               45-280
               

               Cow position:
               chr3:12978764-12978532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 92
               

               Conread position:
               45-280
               

               Cow position:
               chr3:79196612-79196846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               101, 13
               

               Conread position:
               46-242
               

               Cow position:
               chr3:84243915-84243719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 97
               

               Conread position:
               46-266
               

               Cow position:
               chr3:37041264-37041491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               11, 112
               

               Conread position:
               46-267
               

               Cow position:
               chr3:2648660-2648437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 53
               

               Conread position:
               46-277
               

               Cow position:
               chr3:22221173-22221411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               46-320
               

               Cow position:
               chr3:74600965-74601252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               74, 12
               

               Conread position:
               46-321
               

               Cow position:
               chr3:70334111-70333827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               71, 98
               

               Conread position:
               47-167
               

               Cow position:
               chr3:1534766-1534643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               47-238
               

               Cow position:
               chr3:43726931-43727123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               47-255
               

               Cow position:
               chr3:59040420-59040630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               9, 98
               

               Conread position:
               47-310
               

               Cow position:
               chr3:55177898-55177620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               48-254
               

               Cow position:
               chr3:47417711-47417512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               68, 130
               

               Conread position:
               48-316
               

               Cow position:
               chr3:35056125-35055839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               50-268
               

               Cow position:
               chr3:15443873-15443655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               66, 93
               

               Conread position:
               50-269
               

               Cow position:
               chr3:34871425-34871641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 39
               

               Conread position:
               50-316
               

               Cow position:
               chr3:74584074-74584327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               51-174
               

               Cow position:
               chr3:76169427-76169304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 87
               

               Conread position:
               51-258
               

               Cow position:
               chr3:73820512-73820305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               66, 56
               

               Conread position:
               51-268
               

               Cow position:
               chr3:1517656-1517438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               34, 92
               

               Conread position:
               51-268
               

               Cow position:
               chr3:51033229-51033440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               51-309
               

               Cow position:
               chr3:3889709-3889447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               85, 55
               

               Conread position:
               52-259
               

               Cow position:
               chr3:80468816-80468613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               53-167
               

               Cow position:
               chr3:3062423-3062541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               55-268
               

               Cow position:
               chr3:53210159-53209946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               148, 78
               

               Conread position:
               55-321
               

               Cow position:
               chr3:67520310-67520034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               57-174
               

               Cow position:
               chr3:30701170-30701290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               58-268
               

               Cow position:
               chr3:72342109-72342319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 86
               

               Conread position:
               60-268
               

               Cow position:
               chr3:84175959-84175748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               63-267
               

               Cow position:
               chr3:22509896-22510098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               66-307
               

               Cow position:
               chr3:34270788-34271027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 88
               

               Conread position:
               66-316
               

               Cow position:
               chr3:14194306-14194052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 8
               

               Conread position:
               67-273
               

               Cow position:
               chr3:58134814-58134607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               71-307
               

               Cow position:
               chr3:3649340-3649111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               46, 62
               

               Conread position:
               72-273
               

               Cow position:
               chr3:6403300-6403498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               73-253
               

               Cow position:
               chr3:26992446-26992629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               76-259
               

               Cow position:
               chr3:58318071-58317883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               76-268
               

               Cow position:
               chr3:3656393-3656588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               15, 75
               

               Conread position:
               76-268
               

               Cow position:
               chr3:37599544-37599354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               41, 68
               

               Conread position:
               76-268
               

               Cow position:
               chr3:72504016-72503822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               77-252
               

               Cow position:
               chr3:63177362-63177541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               77-309
               

               Cow position:
               chr3:74846826-74846595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               81-316
               

               Cow position:
               chr3:15951024-15950781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 61
               

               Conread position:
               82-268
               

               Cow position:
               chr3:18059590-18059777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 60
               

               Conread position:
               83-268
               

               Cow position:
               chr3:33329703-33329891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               88-272
               

               Cow position:
               chr3:59945020-59945202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               116-267
               

               Cow position:
               chr3:27976602-27976451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-268
               

               Cow position:
               chr3:11640653-11640807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 28
               
Show alignments to all cow chromosomes.
Conread position:	1-266
Cow position:	chr3:48252692-48252957 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	186
Alignm E-value:	1.99993e-41
Alignm gaps (pig, cow):	0, 0
Conread position:	3-162
Cow position:	chr3:80581475-80581637 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	127
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	114, 26
Conread position:	3-255
Cow position:	chr3:55189946-55189692 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	173
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	19, 50
Conread position:	3-267
Cow position:	chr3:210127-210392 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	196
Alignm E-value:	0
Alignm gaps (pig, cow):	104, 90
Conread position:	3-268
Cow position:	chr3:77271463-77271204 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	180
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	28, 57
Conread position:	5-246
Cow position:	chr3:81359301-81359055 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	172
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	17, 139
Conread position:	13-145
Cow position:	chr3:59514925-59515058 (view UCSC Genome Browser custom track)
Alignm length:	136
Alignm identity:	107
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	9, 46
Conread position:	13-150
Cow position:	chr3:75046055-75045916 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	110
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	102, 7
Conread position:	13-247
Cow position:	chr3:5100947-5100719 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	162
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	9, 51
Conread position:	13-258
Cow position:	chr3:55319083-55318833 (view UCSC Genome Browser custom track)
Alignm length:	252
Alignm identity:	172
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	9, 62
Conread position:	13-309
Cow position:	chr3:59000928-59000633 (view UCSC Genome Browser custom track)
Alignm length:	308
Alignm identity:	227
Alignm E-value:	9.94922e-44
Alignm gaps (pig, cow):	9, 46
Conread position:	14-187
Cow position:	chr3:41367163-41366987 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	135
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	8, 50
Conread position:	14-268
Cow position:	chr3:12705725-12705469 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	176
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	8, 45
Conread position:	14-307
Cow position:	chr3:5365492-5365793 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	211
Alignm E-value:	4e-36
Alignm gaps (pig, cow):	8, 133
Conread position:	14-309
Cow position:	chr3:7566598-7566291 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	215
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	102, 68
Conread position:	16-273
Cow position:	chr3:15954264-15954006 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	183
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	6, 45
Conread position:	18-154
Cow position:	chr3:78739682-78739818 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	116
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	99, 40
Conread position:	18-250
Cow position:	chr3:80053718-80053487 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	170
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	42, 135
Conread position:	18-251
Cow position:	chr3:75687613-75687380 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	170
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	101, 125
Conread position:	18-268
Cow position:	chr3:14552704-14552949 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	173
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	98, 31