Cow genome map

Conread name: Ss1.1-Thy1-THY010205G02.5

Conread position: 42-407
Cow position:
Alignm length: 398
Alignm identity: 263
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 132

Conread position: 60-283
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 113, 85

Conread position: 62-261
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 19

Conread position: 69-336
Cow position:
Alignm length: 283
Alignm identity: 204
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 42, 135

Conread position: 73-291
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 34, 57

Conread position: 73-386
Cow position:
Alignm length: 326
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 110

Conread position: 73-389
Cow position:
Alignm length: 330
Alignm identity: 219
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 159

Conread position: 98-273
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 160

Conread position: 98-576
Cow position:
Alignm length: 508
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 32

Conread position: 101-284
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 179, 26

Conread position: 101-366
Cow position:
Alignm length: 275
Alignm identity: 182
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 76, 22

Conread position: 102-291
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 25

Conread position: 103-375
Cow position:
Alignm length: 282
Alignm identity: 190
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 76, 26

Conread position: 105-267
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 74, 24

Conread position: 105-300
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 166, 24

Conread position: 105-362
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 28

Conread position: 105-363
Cow position:
Alignm length: 263
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 179, 24

Conread position: 105-407
Cow position:
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 24

Conread position: 105-475
Cow position:
Alignm length: 378
Alignm identity: 249
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 26

Conread position: 105-483
Cow position:
Alignm length: 390
Alignm identity: 258
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 24

Conread position: 106-272
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 106-300
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 74, 94

Conread position: 107-383
Cow position:
Alignm length: 284
Alignm identity: 187
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 47, 22

Conread position: 107-475
Cow position:
Alignm length: 377
Alignm identity: 251
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 69, 22

Conread position: 108-253
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 96

Conread position: 108-267
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 19

Conread position: 108-267
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 71, 15

Conread position: 108-267
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 91

Conread position: 108-272
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 97

Conread position: 108-274
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 108-294
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 90

Conread position: 108-300
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 90

Conread position: 108-385
Cow position:
Alignm length: 288
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 211

Conread position: 109-255
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 109-274
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 149

Conread position: 109-300
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 109-305
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 109-314
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 72

Conread position: 109-358
Cow position:
Alignm length: 256
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 73

Conread position: 109-363
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 210

Conread position: 109-363
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 44

Conread position: 109-363
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 212

Conread position: 109-372
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 22, 72

Conread position: 109-374
Cow position:
Alignm length: 275
Alignm identity: 181
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 84

Conread position: 109-379
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 44

Conread position: 109-386
Cow position:
Alignm length: 293
Alignm identity: 198
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 19

Conread position: 109-391
Cow position:
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 23

Conread position: 109-405
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 157

Conread position: 109-407
Cow position:
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 118

Conread position: 109-407
Cow position:
Alignm length: 308
Alignm identity: 219
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 110

Conread position: 109-407
Cow position:
Alignm length: 307
Alignm identity: 225
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 22, 132

Conread position: 109-407
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 74

Conread position: 109-407
Cow position:
Alignm length: 307
Alignm identity: 214
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 23, 74

Conread position: 109-408
Cow position:
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 109-475
Cow position:
Alignm length: 373
Alignm identity: 242
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 148, 68

Conread position: 109-483
Cow position:
Alignm length: 382
Alignm identity: 251
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 22, 46

Conread position: 109-505
Cow position:
Alignm length: 400
Alignm identity: 256
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 68

Conread position: 109-574
Cow position:
Alignm length: 482
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 89

Conread position: 110-273
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 68

Conread position: 110-293
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 110

Conread position: 110-299
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 90

Conread position: 110-374
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 63

Conread position: 110-379
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 71, 37

Conread position: 111-255
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 111-405
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 66

Conread position: 111-473
Cow position:
Alignm length: 371
Alignm identity: 241
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 229

Conread position: 114-355
Cow position:
Alignm length: 250
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 81

Conread position: 114-405
Cow position:
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 116-278
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 15, 85

Conread position: 116-294
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 64, 82

Conread position: 116-363
Cow position:
Alignm length: 253
Alignm identity: 169
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 81

Conread position: 116-483
Cow position:
Alignm length: 377
Alignm identity: 242
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 42

Conread position: 116-505
Cow position:
Alignm length: 395
Alignm identity: 259
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 35

Conread position: 117-273
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 10

Conread position: 117-273
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 10

Conread position: 117-294
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 12

Conread position: 117-374
Cow position:
Alignm length: 263
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 14

Conread position: 117-403
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 13

Conread position: 117-404
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 42

Conread position: 117-527
Cow position:
Alignm length: 437
Alignm identity: 296
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 46, 13

Conread position: 122-375
Cow position:
Alignm length: 257
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 71

Conread position: 122-384
Cow position:
Alignm length: 271
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 166

Conread position: 122-406
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 207, 46

Conread position: 123-255
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 82

Conread position: 123-269
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 140, 72

Conread position: 123-269
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 123-272
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 77

Conread position: 123-273
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 72

Conread position: 123-300
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 82

Conread position: 123-363
Cow position:
Alignm length: 245
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 54

Conread position: 123-372
Cow position:
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 200

Conread position: 123-381
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 54, 75

Conread position: 123-406
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 139, 61

Conread position: 123-407
Cow position:
Alignm length: 300
Alignm identity: 198
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 106

Conread position: 127-268
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 66

Conread position: 127-268
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 72

Conread position: 127-271
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 72

Conread position: 127-273
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 11

Conread position: 127-299
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 71

Conread position: 127-315
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 72

Conread position: 127-366
Cow position:
Alignm length: 244
Alignm identity: 163
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 68, 55

Conread position: 127-407
Cow position:
Alignm length: 284
Alignm identity: 200
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 50

Conread position: 127-407
Cow position:
Alignm length: 288
Alignm identity: 205
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 49, 23

Conread position: 128-257
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 74

Conread position: 128-265
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 49

Conread position: 128-276
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 70

Conread position: 128-279
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 128-287
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 156, 50

Conread position: 128-300
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 75

Conread position: 128-300
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 71

Conread position: 128-305
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 54

Conread position: 128-329
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 78

Conread position: 128-374
Cow position:
Alignm length: 247
Alignm identity: 163
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 128-374
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 205

Conread position: 128-375
Cow position:
Alignm length: 255
Alignm identity: 176
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 56, 96

Conread position: 128-384
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 68

Conread position: 128-389
Cow position:
Alignm length: 269
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 105

Conread position: 128-404
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 49, 86

Conread position: 128-404
Cow position:
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 128-406
Cow position:
Alignm length: 286
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 101, 43

Conread position: 128-407
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 49, 90

Conread position: 128-483
Cow position:
Alignm length: 369
Alignm identity: 243
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 64

Conread position: 128-572
Cow position:
Alignm length: 468
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 87

Conread position: 130-257
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 47

Conread position: 130-379
Cow position:
Alignm length: 255
Alignm identity: 176
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 116, 15

Conread position: 130-410
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 47, 32

Conread position: 130-483
Cow position:
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 80

Conread position: 134-314
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 116

Conread position: 139-272
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 145-483
Cow position:
Alignm length: 355
Alignm identity: 231
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 55

Conread position: 147-277
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 54

Conread position: 172-388
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 151

Conread position: 172-569
Cow position:
Alignm length: 408
Alignm identity: 286
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 78, 44

Conread position: 178-389
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 71, 56

Conread position: 179-574
Cow position:
Alignm length: 426
Alignm identity: 300
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 112, 69

Conread position: 187-462
Cow position:
Alignm length: 284
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 19

Conread position: 196-407
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 88

Conread position: 201-574
Cow position:
Alignm length: 400
Alignm identity: 279
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 124

Conread position: 218-570
Cow position:
Alignm length: 373
Alignm identity: 256
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 52, 103

Conread position: 245-407
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 14

Conread position: 262-407
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 57

Conread position: 313-549
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 145

Conread position: 401-529
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 406-574
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 80, 46

Show alignments to all cow chromosomes.