Cow genome map
| Conread name: | Ss1.1-Thy1-THY010205G02.5 |
| Conread position: | 42-407 |
| Cow position: | chr1:62434048-62433663 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 132 |
| Conread position: | 60-283 |
| Cow position: | chr1:57297251-57297476 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 113, 85 |
| Conread position: | 62-261 |
| Cow position: | chr1:86110951-86110753 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 69-336 |
| Cow position: | chr1:31378156-31377887 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 73-291 |
| Cow position: | chr1:61240987-61241210 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 73-386 |
| Cow position: | chr1:7233089-7233406 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 110 |
| Conread position: | 73-389 |
| Cow position: | chr1:98655932-98655609 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 159 |
| Conread position: | 98-273 |
| Cow position: | chr1:29916221-29916397 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 160 |
| Conread position: | 98-576 |
| Cow position: | chr1:30041541-30042032 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 101-284 |
| Cow position: | chr1:83072262-83072437 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 179, 26 |
| Conread position: | 101-366 |
| Cow position: | chr1:44506786-44507058 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 102-291 |
| Cow position: | chr1:25383482-25383672 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 25 |
| Conread position: | 103-375 |
| Cow position: | chr1:95176760-95177033 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 105-267 |
| Cow position: | chr1:5061849-5062013 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 105-300 |
| Cow position: | chr1:95765262-95765072 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 166, 24 |
| Conread position: | 105-362 |
| Cow position: | chr1:28284401-28284656 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 105-363 |
| Cow position: | chr1:90423259-90423001 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 179, 24 |
| Conread position: | 105-407 |
| Cow position: | chr1:64480154-64479850 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 105-475 |
| Cow position: | chr1:92010140-92010496 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 105-483 |
| Cow position: | chr1:74947300-74946931 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 106-272 |
| Cow position: | chr1:68854993-68855150 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 106-300 |
| Cow position: | chr1:102647450-102647257 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 74, 94 |
| Conread position: | 107-383 |
| Cow position: | chr1:6939813-6939535 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 107-475 |
| Cow position: | chr1:69415889-69415530 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 108-253 |
| Cow position: | chr1:68763861-68763713 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 108-267 |
| Cow position: | chr1:40599869-40600028 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 66, 19 |
| Conread position: | 108-267 |
| Cow position: | chr1:75967257-75967414 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 71, 15 |
| Conread position: | 108-267 |
| Cow position: | chr1:94404037-94404197 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 91 |
| Conread position: | 108-272 |
| Cow position: | chr1:20384800-20384630 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 108-274 |
| Cow position: | chr1:79844289-79844460 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 108-294 |
| Cow position: | chr1:39418298-39418107 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 108-300 |
| Cow position: | chr1:12464843-12464646 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 108-385 |
| Cow position: | chr1:10719661-10719377 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 211 |
| Conread position: | 109-255 |
| Cow position: | chr1:93110800-93110648 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 109-274 |
| Cow position: | chr1:70282757-70282927 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 149 |
| Conread position: | 109-300 |
| Cow position: | chr1:58889474-58889272 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 109-305 |
| Cow position: | chr1:84235509-84235308 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 109-314 |
| Cow position: | chr1:8869838-8869627 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 109-358 |
| Cow position: | chr1:59808121-59807874 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 109-363 |
| Cow position: | chr1:22777728-22777462 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 210 |
| Conread position: | 109-363 |
| Cow position: | chr1:29975776-29975518 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 109-363 |
| Cow position: | chr1:30413409-30413672 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 212 |
| Conread position: | 109-372 |
| Cow position: | chr1:70933561-70933307 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 109-374 |
| Cow position: | chr1:81355882-81355611 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 109-379 |
| Cow position: | chr1:80764713-80764439 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 109-386 |
| Cow position: | chr1:1825600-1825886 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 109-391 |
| Cow position: | chr1:52206513-52206789 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 23 |
| Conread position: | 109-405 |
| Cow position: | chr1:34892388-34892682 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 157 |
| Conread position: | 109-407 |
| Cow position: | chr1:22495358-22495670 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 109-407 |
| Cow position: | chr1:55202796-55202504 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 109-407 |
| Cow position: | chr1:64099442-64099152 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 22, 132 |
| Conread position: | 109-407 |
| Cow position: | chr1:81371852-81371569 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 109-407 |
| Cow position: | chr1:88304144-88304431 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 109-408 |
| Cow position: | chr1:42174767-42174462 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 109-475 |
| Cow position: | chr1:64189325-64189681 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 148, 68 |
| Conread position: | 109-483 |
| Cow position: | chr1:53039878-53039519 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 109-505 |
| Cow position: | chr1:66355887-66355506 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 139, 68 |
| Conread position: | 109-574 |
| Cow position: | chr1:25886253-25885801 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 110-273 |
| Cow position: | chr1:53411087-53410924 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 110-293 |
| Cow position: | chr1:85783348-85783537 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 110-299 |
| Cow position: | chr1:7143026-7142828 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 110-374 |
| Cow position: | chr1:90868616-90868349 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 63 |
| Conread position: | 110-379 |
| Cow position: | chr1:31390762-31390491 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 111-255 |
| Cow position: | chr1:51836395-51836543 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 111-405 |
| Cow position: | chr1:57646501-57646792 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 18, 66 |
| Conread position: | 111-473 |
| Cow position: | chr1:23099723-23100079 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 229 |
| Conread position: | 114-355 |
| Cow position: | chr1:21934345-21934100 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 81 |
| Conread position: | 114-405 |
| Cow position: | chr1:22516374-22516668 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 116-278 |
| Cow position: | chr1:12596073-12595907 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 116-294 |
| Cow position: | chr1:74084364-74084184 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 116-363 |
| Cow position: | chr1:46030524-46030279 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 116-483 |
| Cow position: | chr1:56477423-56477792 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 116-505 |
| Cow position: | chr1:8243208-8243585 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 35 |
| Conread position: | 117-273 |
| Cow position: | chr1:55705415-55705260 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 117-273 |
| Cow position: | chr1:70538442-70538597 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 117-294 |
| Cow position: | chr1:32244566-32244391 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 117-374 |
| Cow position: | chr1:43703243-43703501 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 117-403 |
| Cow position: | chr1:54162972-54162683 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 117-404 |
| Cow position: | chr1:33085162-33084875 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 117-527 |
| Cow position: | chr1:23624003-23624423 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 296 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 122-375 |
| Cow position: | chr1:15691176-15691428 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 122-384 |
| Cow position: | chr1:63314667-63314932 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 166 |
| Conread position: | 122-406 |
| Cow position: | chr1:52819155-52819419 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 207, 46 |
| Conread position: | 123-255 |
| Cow position: | chr1:82884550-82884416 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 123-269 |
| Cow position: | chr1:49839347-49839492 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 140, 72 |
| Conread position: | 123-269 |
| Cow position: | chr1:75198984-75199128 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 123-272 |
| Cow position: | chr1:57900899-57900752 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 77 |
| Conread position: | 123-273 |
| Cow position: | chr1:26201060-26201209 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 123-300 |
| Cow position: | chr1:68817959-68817779 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 82 |
| Conread position: | 123-363 |
| Cow position: | chr1:71135992-71136234 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 54 |
| Conread position: | 123-372 |
| Cow position: | chr1:17291803-17291548 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 200 |
| Conread position: | 123-381 |
| Cow position: | chr1:71938672-71938409 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 123-406 |
| Cow position: | chr1:52774681-52774406 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 139, 61 |
| Conread position: | 123-407 |
| Cow position: | chr1:21430163-21429868 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 57, 106 |
| Conread position: | 127-268 |
| Cow position: | chr1:41696902-41697047 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 127-268 |
| Cow position: | chr1:73960549-73960692 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 72 |
| Conread position: | 127-271 |
| Cow position: | chr1:37322158-37322011 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 127-273 |
| Cow position: | chr1:43505370-43505515 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 127-299 |
| Cow position: | chr1:65909370-65909542 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 53, 71 |
| Conread position: | 127-315 |
| Cow position: | chr1:68619090-68618899 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-366 |
| Cow position: | chr1:31190264-31190026 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 68, 55 |
| Conread position: | 127-407 |
| Cow position: | chr1:28567586-28567315 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 122, 50 |
| Conread position: | 127-407 |
| Cow position: | chr1:86325763-86325480 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 128-257 |
| Cow position: | chr1:83593960-83593826 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 128-265 |
| Cow position: | chr1:14528351-14528212 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 49 |
| Conread position: | 128-276 |
| Cow position: | chr1:51968306-51968455 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 128-279 |
| Cow position: | chr1:49131273-49131113 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 128-287 |
| Cow position: | chr1:56643742-56643584 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 156, 50 |
| Conread position: | 128-300 |
| Cow position: | chr1:38753762-38753939 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 128-300 |
| Cow position: | chr1:88652475-88652649 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 128-305 |
| Cow position: | chr1:73522295-73522124 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 133, 54 |
| Conread position: | 128-329 |
| Cow position: | chr1:60120277-60120469 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 78 |
| Conread position: | 128-374 |
| Cow position: | chr1:55146650-55146890 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 128-374 |
| Cow position: | chr1:75347465-75347716 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 205 |
| Conread position: | 128-375 |
| Cow position: | chr1:69004241-69004487 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 128-384 |
| Cow position: | chr1:37739754-37739505 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 68 |
| Conread position: | 128-389 |
| Cow position: | chr1:82865078-82865339 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 49, 105 |
| Conread position: | 128-404 |
| Cow position: | chr1:14561099-14560828 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 49, 86 |
| Conread position: | 128-404 |
| Cow position: | chr1:18224030-18223747 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 128-406 |
| Cow position: | chr1:15307883-15308157 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 101, 43 |
| Conread position: | 128-407 |
| Cow position: | chr1:86614710-86614982 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 128-483 |
| Cow position: | chr1:21787175-21787530 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 128-572 |
| Cow position: | chr1:92551289-92550843 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 130-257 |
| Cow position: | chr1:31399375-31399251 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 47 |
| Conread position: | 130-379 |
| Cow position: | chr1:30441808-30442053 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 116, 15 |
| Conread position: | 130-410 |
| Cow position: | chr1:82406703-82406422 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 130-483 |
| Cow position: | chr1:59910198-59910552 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 80 |
| Conread position: | 134-314 |
| Cow position: | chr1:85596200-85596011 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 116 |
| Conread position: | 139-272 |
| Cow position: | chr1:50045655-50045792 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 145-483 |
| Cow position: | chr1:48444332-48443984 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 55 |
| Conread position: | 147-277 |
| Cow position: | chr1:53425038-53425169 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 172-388 |
| Cow position: | chr1:9512216-9511996 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 89, 151 |
| Conread position: | 172-569 |
| Cow position: | chr1:34310747-34311130 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 286 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 178-389 |
| Cow position: | chr1:86364789-86364997 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 179-574 |
| Cow position: | chr1:87915059-87914649 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 112, 69 |
| Conread position: | 187-462 |
| Cow position: | chr1:88960374-88960653 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 196-407 |
| Cow position: | chr1:77868062-77868271 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 201-574 |
| Cow position: | chr1:74713371-74713763 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 279 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 218-570 |
| Cow position: | chr1:85409935-85409574 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 52, 103 |
| Conread position: | 245-407 |
| Cow position: | chr1:40223073-40222911 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 262-407 |
| Cow position: | chr1:39244598-39244453 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 57 |
| Conread position: | 313-549 |
| Cow position: | chr1:71555758-71555523 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 145 |
| Conread position: | 401-529 |
| Cow position: | chr1:22070399-22070522 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 406-574 |
| Cow position: | chr1:31233206-31233037 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 80, 46 |
Show alignments to all cow chromosomes.