Cow genome map

Conread name: Ss1.1-Thy1-THY010205G02.5

Conread position: 73-254
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 35

Conread position: 87-374
Cow position:
Alignm length: 299
Alignm identity: 194
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 109

Conread position: 93-255
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 37

Conread position: 101-267
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 22

Conread position: 104-407
Cow position:
Alignm length: 314
Alignm identity: 222
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 50, 26

Conread position: 105-280
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 150, 24

Conread position: 105-300
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 22

Conread position: 105-357
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 24

Conread position: 105-377
Cow position:
Alignm length: 281
Alignm identity: 188
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 24

Conread position: 105-407
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 24

Conread position: 106-277
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 157, 23

Conread position: 106-300
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 23

Conread position: 107-263
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 89

Conread position: 107-316
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 198

Conread position: 108-266
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 94

Conread position: 108-266
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 94

Conread position: 108-268
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 18

Conread position: 108-271
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 90

Conread position: 108-277
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 88

Conread position: 108-277
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 73, 91

Conread position: 108-284
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 91

Conread position: 108-379
Cow position:
Alignm length: 281
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 102

Conread position: 108-407
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 85

Conread position: 109-277
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 80

Conread position: 109-296
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 109-363
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 22, 113

Conread position: 109-371
Cow position:
Alignm length: 281
Alignm identity: 192
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 149

Conread position: 109-374
Cow position:
Alignm length: 273
Alignm identity: 182
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 10, 22

Conread position: 109-405
Cow position:
Alignm length: 307
Alignm identity: 208
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 32, 48

Conread position: 109-410
Cow position:
Alignm length: 307
Alignm identity: 213
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 22, 72

Conread position: 109-483
Cow position:
Alignm length: 385
Alignm identity: 250
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 94

Conread position: 109-490
Cow position:
Alignm length: 391
Alignm identity: 259
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 84

Conread position: 110-272
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 19

Conread position: 110-299
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 110-357
Cow position:
Alignm length: 262
Alignm identity: 185
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 20, 212

Conread position: 111-573
Cow position:
Alignm length: 500
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 94

Conread position: 111-574
Cow position:
Alignm length: 480
Alignm identity: 327
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 110

Conread position: 114-473
Cow position:
Alignm length: 364
Alignm identity: 238
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 64

Conread position: 114-474
Cow position:
Alignm length: 378
Alignm identity: 242
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 86

Conread position: 116-272
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 16

Conread position: 116-314
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 16

Conread position: 116-318
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 82

Conread position: 117-261
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 79

Conread position: 117-294
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 13

Conread position: 117-295
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 13

Conread position: 117-319
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 10

Conread position: 117-363
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 165, 60

Conread position: 117-407
Cow position:
Alignm length: 293
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 165, 12

Conread position: 117-472
Cow position:
Alignm length: 374
Alignm identity: 240
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 29

Conread position: 117-483
Cow position:
Alignm length: 373
Alignm identity: 234
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 13

Conread position: 118-320
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 9

Conread position: 118-374
Cow position:
Alignm length: 263
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 5

Conread position: 122-300
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 131

Conread position: 122-475
Cow position:
Alignm length: 359
Alignm identity: 234
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 160, 54

Conread position: 123-257
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 72

Conread position: 123-273
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 82

Conread position: 123-294
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 74

Conread position: 123-300
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 72

Conread position: 123-300
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 54

Conread position: 123-318
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 57

Conread position: 123-343
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 77

Conread position: 123-374
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 76

Conread position: 123-468
Cow position:
Alignm length: 350
Alignm identity: 235
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 144

Conread position: 127-252
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 72

Conread position: 127-262
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 72

Conread position: 127-262
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 72

Conread position: 127-266
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 73

Conread position: 127-268
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 73

Conread position: 127-269
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 66

Conread position: 127-271
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 72

Conread position: 127-271
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 72

Conread position: 127-272
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 72

Conread position: 127-273
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 78

Conread position: 127-275
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 71

Conread position: 127-289
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 128

Conread position: 127-299
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 69

Conread position: 127-300
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 77

Conread position: 127-300
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 72

Conread position: 127-319
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 74

Conread position: 127-354
Cow position:
Alignm length: 234
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 127-475
Cow position:
Alignm length: 352
Alignm identity: 231
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 48, 177

Conread position: 128-267
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 128-267
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 77

Conread position: 128-267
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 75

Conread position: 128-272
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 77

Conread position: 128-300
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 128-310
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 71

Conread position: 128-318
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 69

Conread position: 128-321
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 68

Conread position: 128-363
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 72

Conread position: 128-374
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 119, 44

Conread position: 128-379
Cow position:
Alignm length: 261
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 87

Conread position: 128-380
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 138, 48

Conread position: 128-388
Cow position:
Alignm length: 267
Alignm identity: 179
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 173

Conread position: 128-404
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 95

Conread position: 128-407
Cow position:
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 67

Conread position: 129-278
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 70

Conread position: 129-282
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 49

Conread position: 129-294
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 70

Conread position: 129-297
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 129-319
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 127

Conread position: 129-363
Cow position:
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 182

Conread position: 130-267
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 75

Conread position: 130-269
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 63

Conread position: 130-363
Cow position:
Alignm length: 240
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 59

Conread position: 132-375
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 104

Conread position: 134-436
Cow position:
Alignm length: 317
Alignm identity: 210
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 43, 187

Conread position: 172-389
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 84, 127

Conread position: 172-398
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 88, 36

Conread position: 184-407
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 70

Conread position: 199-407
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 54

Conread position: 201-407
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 62

Conread position: 204-573
Cow position:
Alignm length: 393
Alignm identity: 277
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 92, 116

Conread position: 247-561
Cow position:
Alignm length: 346
Alignm identity: 240
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 48, 73

Conread position: 270-574
Cow position:
Alignm length: 331
Alignm identity: 237
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 25, 50

Conread position: 298-576
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 95, 9

Conread position: 406-574
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 406-574
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 125, 51

Conread position: 429-574
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 23

Show alignments to all cow chromosomes.