Cow genome map

Conread name: Ss1.1-Thy1-THY010205G02.5

Conread position: 73-305
Cow position: chr12:2670006-2670242 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 60

Conread position: 73-574
Cow position: chr12:25513634-25514141 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 349
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 106

Conread position: 98-252
Cow position: chr12:35317943-35317792 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 102-297
Cow position: chr12:38512067-38511873 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 71, 21

Conread position: 102-300
Cow position: chr12:27495784-27495980 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 27

Conread position: 105-287
Cow position: chr12:35807459-35807644 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 75, 25

Conread position: 105-300
Cow position: chr12:32399976-32400176 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 24

Conread position: 105-378
Cow position: chr12:30596245-30596520 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 24

Conread position: 105-407
Cow position: chr12:22473741-22474048 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 68, 24

Conread position: 105-459
Cow position: chr12:28559077-28559422 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 74, 24

Conread position: 105-483
Cow position: chr12:32413289-32413675 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 250
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 24

Conread position: 107-300
Cow position: chr12:23797887-23798073 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 108-274
Cow position: chr12:731159-730990 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 99

Conread position: 108-387
Cow position: chr12:5539189-5538907 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 30

Conread position: 109-255
Cow position: chr12:18081766-18081622 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 116

Conread position: 109-255
Cow position: chr12:18769297-18769145 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 109-268
Cow position: chr12:6117677-6117844 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 22, 103

Conread position: 109-292
Cow position: chr12:34385731-34385549 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 14

Conread position: 109-314
Cow position: chr12:16851232-16851018 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 102

Conread position: 109-377
Cow position: chr12:3757256-3756996 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 20

Conread position: 109-378
Cow position: chr12:33457924-33458199 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 93

Conread position: 109-407
Cow position: chr12:8097002-8096712 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 78

Conread position: 109-476
Cow position: chr12:16543792-16543441 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 244
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 36

Conread position: 110-255
Cow position: chr12:1223565-1223415 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 110-300
Cow position: chr12:47803933-47804131 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 93

Conread position: 110-314
Cow position: chr12:21304366-21304160 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 44

Conread position: 110-321
Cow position: chr12:8909399-8909186 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 94, 50

Conread position: 110-372
Cow position: chr12:3212103-3212363 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 155

Conread position: 114-407
Cow position: chr12:32221442-32221744 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 150

Conread position: 117-388
Cow position: chr12:10028690-10028940 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 12

Conread position: 118-277
Cow position: chr12:3906263-3906423 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 63, 11

Conread position: 118-318
Cow position: chr12:17881652-17881853 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 120

Conread position: 123-300
Cow position: chr12:42966795-42966972 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 72

Conread position: 123-306
Cow position: chr12:18544439-18544621 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 132, 21

Conread position: 123-389
Cow position: chr12:27938707-27938989 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 172

Conread position: 126-273
Cow position: chr12:22261026-22260878 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 72

Conread position: 127-267
Cow position: chr12:5905856-5905995 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 34

Conread position: 127-277
Cow position: chr12:17702430-17702277 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 127-300
Cow position: chr12:29770774-29770598 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 127-360
Cow position: chr12:45555618-45555391 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 61

Conread position: 127-389
Cow position: chr12:34488911-34488649 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 148, 5

Conread position: 127-483
Cow position: chr12:36544850-36544482 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 244
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 57, 72

Conread position: 128-267
Cow position: chr12:18417367-18417511 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 49

Conread position: 128-275
Cow position: chr12:8869076-8868929 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 7

Conread position: 128-301
Cow position: chr12:32391645-32391823 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 76

Conread position: 128-310
Cow position: chr12:4182891-4182708 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 70

Conread position: 128-316
Cow position: chr12:27055410-27055597 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 90

Conread position: 128-330
Cow position: chr12:24559157-24559359 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 86

Conread position: 128-381
Cow position: chr12:31218260-31218511 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 22

Conread position: 128-388
Cow position: chr12:34484119-34483862 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 7

Conread position: 128-407
Cow position: chr12:12983069-12982785 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 94

Conread position: 129-267
Cow position: chr12:34089641-34089783 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 130-407
Cow position: chr12:10162149-10161882 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 11

Conread position: 145-380
Cow position: chr12:29494837-29494607 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 67

Conread position: 172-407
Cow position: chr12:12711382-12711142 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 58, 81

Conread position: 178-436
Cow position: chr12:29842621-29842868 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 181-389
Cow position: chr12:23498003-23498194 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 110, 32

Conread position: 200-407
Cow position: chr12:21066069-21066277 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 112

Conread position: 218-407
Cow position: chr12:26311194-26311011 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 12

Conread position: 223-407
Cow position: chr12:23892422-23892605 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 93

Conread position: 254-574
Cow position: chr12:29760714-29760376 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 66

Show alignments to all cow chromosomes.