Cow genome map

Conread name: Ss1.1-Thy1-THY010205G02.5

Conread position: 73-232
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 110

Conread position: 73-363
Cow position:
Alignm length: 297
Alignm identity: 198
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 107, 48

Conread position: 73-369
Cow position:
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 78

Conread position: 74-574
Cow position:
Alignm length: 513
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 130

Conread position: 80-407
Cow position:
Alignm length: 332
Alignm identity: 223
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 27, 79

Conread position: 101-279
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 72, 28

Conread position: 101-282
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 21

Conread position: 101-300
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 29

Conread position: 101-366
Cow position:
Alignm length: 273
Alignm identity: 181
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 22

Conread position: 105-247
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 24

Conread position: 105-255
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 24

Conread position: 105-314
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 144, 24

Conread position: 105-318
Cow position:
Alignm length: 219
Alignm identity: 148
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 93, 22

Conread position: 105-378
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 68, 24

Conread position: 105-407
Cow position:
Alignm length: 310
Alignm identity: 228
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 162, 24

Conread position: 106-360
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 90

Conread position: 107-407
Cow position:
Alignm length: 304
Alignm identity: 206
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 20

Conread position: 108-254
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 23, 97

Conread position: 108-272
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 54

Conread position: 108-277
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 48

Conread position: 108-282
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 15

Conread position: 108-299
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 94

Conread position: 108-300
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 89

Conread position: 108-318
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 85

Conread position: 108-435
Cow position:
Alignm length: 339
Alignm identity: 220
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 37

Conread position: 108-475
Cow position:
Alignm length: 376
Alignm identity: 257
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 40, 21

Conread position: 109-255
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 109-268
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 130

Conread position: 109-274
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 109-284
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 69

Conread position: 109-293
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 139

Conread position: 109-299
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 21

Conread position: 109-308
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 109-360
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 88

Conread position: 109-363
Cow position:
Alignm length: 263
Alignm identity: 178
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 84, 17

Conread position: 109-363
Cow position:
Alignm length: 264
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 163

Conread position: 109-373
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 22, 112

Conread position: 109-406
Cow position:
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 227

Conread position: 109-406
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 72

Conread position: 109-407
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 73

Conread position: 109-482
Cow position:
Alignm length: 385
Alignm identity: 251
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 90

Conread position: 109-482
Cow position:
Alignm length: 380
Alignm identity: 245
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 140, 36

Conread position: 109-483
Cow position:
Alignm length: 386
Alignm identity: 253
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 103

Conread position: 109-574
Cow position:
Alignm length: 489
Alignm identity: 333
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 223, 64

Conread position: 110-270
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 73

Conread position: 110-299
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 187

Conread position: 110-373
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 20, 55

Conread position: 110-407
Cow position:
Alignm length: 309
Alignm identity: 215
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 86

Conread position: 116-377
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 84

Conread position: 117-252
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 12

Conread position: 117-265
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 125, 110

Conread position: 117-268
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 12

Conread position: 117-277
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 13

Conread position: 117-374
Cow position:
Alignm length: 263
Alignm identity: 176
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 60, 12

Conread position: 117-407
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 132, 15

Conread position: 118-300
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 80

Conread position: 123-240
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 73

Conread position: 123-277
Cow position:
Alignm length: 156
Alignm identity: 126
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 54, 126

Conread position: 123-300
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 47, 83

Conread position: 123-364
Cow position:
Alignm length: 248
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 164

Conread position: 123-407
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 63

Conread position: 123-483
Cow position:
Alignm length: 372
Alignm identity: 234
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 231, 54

Conread position: 124-254
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 51

Conread position: 124-300
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 75

Conread position: 124-374
Cow position:
Alignm length: 258
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 182

Conread position: 126-268
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 79

Conread position: 127-254
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 72

Conread position: 127-266
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 127-266
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 79

Conread position: 127-267
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 69

Conread position: 127-272
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 73

Conread position: 127-280
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 74

Conread position: 127-284
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 74

Conread position: 127-294
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 22

Conread position: 127-300
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 69

Conread position: 127-401
Cow position:
Alignm length: 282
Alignm identity: 194
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 48

Conread position: 128-265
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 65

Conread position: 128-268
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 51, 65

Conread position: 128-272
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 71

Conread position: 128-275
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 51, 72

Conread position: 128-282
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 13

Conread position: 128-299
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 130

Conread position: 128-300
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 128-300
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 65

Conread position: 128-300
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 17

Conread position: 128-363
Cow position:
Alignm length: 243
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 49

Conread position: 128-374
Cow position:
Alignm length: 252
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 121, 76

Conread position: 128-379
Cow position:
Alignm length: 263
Alignm identity: 178
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 25

Conread position: 128-389
Cow position:
Alignm length: 273
Alignm identity: 207
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 45, 65

Conread position: 128-407
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 31

Conread position: 128-407
Cow position:
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 99

Conread position: 128-407
Cow position:
Alignm length: 282
Alignm identity: 195
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 205, 47

Conread position: 128-407
Cow position:
Alignm length: 285
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 27

Conread position: 128-483
Cow position:
Alignm length: 363
Alignm identity: 242
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 66

Conread position: 128-574
Cow position:
Alignm length: 465
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 48

Conread position: 129-268
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 62

Conread position: 129-374
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 32

Conread position: 129-378
Cow position:
Alignm length: 256
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 128, 16

Conread position: 130-288
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 50, 0

Conread position: 130-296
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 83

Conread position: 130-317
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 14

Conread position: 130-379
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 127

Conread position: 154-369
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 40

Conread position: 161-407
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 16

Conread position: 212-407
Cow position:
Alignm length: 200
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 79, 108

Conread position: 238-407
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 19, 48

Conread position: 273-574
Cow position:
Alignm length: 319
Alignm identity: 215
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 47

Conread position: 406-567
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 46

Conread position: 406-574
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 80, 46

Conread position: 406-574
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 139, 29

Conread position: 416-574
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 132, 38

Conread position: 429-574
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 26

Show alignments to all cow chromosomes.