Cow genome map
| Conread name: | Ss1.1-Thy1-THY010205G02.5 |
| Conread position: | 73-232 |
| Cow position: | chr13:8551988-8551826 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 110 |
| Conread position: | 73-363 |
| Cow position: | chr13:20180616-20180323 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 107, 48 |
| Conread position: | 73-369 |
| Cow position: | chr13:34333732-34334037 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 74-574 |
| Cow position: | chr13:34931090-34931569 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 130 |
| Conread position: | 80-407 |
| Cow position: | chr13:60220361-60220686 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 101-279 |
| Cow position: | chr13:33517751-33517925 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 101-282 |
| Cow position: | chr13:25531615-25531794 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 101-300 |
| Cow position: | chr13:9665239-9665032 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 101-366 |
| Cow position: | chr13:18166903-18166638 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 105-247 |
| Cow position: | chr13:24539661-24539518 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 105-255 |
| Cow position: | chr13:50823388-50823532 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 105-314 |
| Cow position: | chr13:7010634-7010426 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 144, 24 |
| Conread position: | 105-318 |
| Cow position: | chr13:9643717-9643932 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 105-378 |
| Cow position: | chr13:8245167-8245438 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 105-407 |
| Cow position: | chr13:43384469-43384762 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 162, 24 |
| Conread position: | 106-360 |
| Cow position: | chr13:6603038-6603294 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 107-407 |
| Cow position: | chr13:6498760-6498472 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 108-254 |
| Cow position: | chr13:35659924-35659773 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 108-272 |
| Cow position: | chr13:54093911-54093744 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 108-277 |
| Cow position: | chr13:37981581-37981748 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 108-282 |
| Cow position: | chr13:7663258-7663427 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 15 |
| Conread position: | 108-299 |
| Cow position: | chr13:60429907-60430100 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 94 |
| Conread position: | 108-300 |
| Cow position: | chr13:47964028-47964218 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 108-318 |
| Cow position: | chr13:43762336-43762123 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 85 |
| Conread position: | 108-435 |
| Cow position: | chr13:51940902-51940569 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 108-475 |
| Cow position: | chr13:34995164-34995519 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 109-255 |
| Cow position: | chr13:32717705-32717855 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 109-268 |
| Cow position: | chr13:41608199-41608358 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 130 |
| Conread position: | 109-274 |
| Cow position: | chr13:2302667-2302842 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 109-284 |
| Cow position: | chr13:1766938-1766759 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 109-293 |
| Cow position: | chr13:17346977-17346788 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 139 |
| Conread position: | 109-299 |
| Cow position: | chr13:46284453-46284644 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 109-308 |
| Cow position: | chr13:57745929-57746140 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 109-360 |
| Cow position: | chr13:10859792-10860043 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 109-363 |
| Cow position: | chr13:11834309-11834569 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 109-363 |
| Cow position: | chr13:32535825-32535566 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 163 |
| Conread position: | 109-373 |
| Cow position: | chr13:47863530-47863803 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 109-406 |
| Cow position: | chr13:46458792-46458490 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 227 |
| Conread position: | 109-406 |
| Cow position: | chr13:48626919-48626640 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 109-407 |
| Cow position: | chr13:55406494-55406792 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 73 |
| Conread position: | 109-482 |
| Cow position: | chr13:19188469-19188100 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 109-482 |
| Cow position: | chr13:54094976-54094613 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 140, 36 |
| Conread position: | 109-483 |
| Cow position: | chr13:11767872-11768242 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 109-574 |
| Cow position: | chr13:37497586-37498041 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 333 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 223, 64 |
| Conread position: | 110-270 |
| Cow position: | chr13:9803236-9803069 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 73 |
| Conread position: | 110-299 |
| Cow position: | chr13:55843652-55843453 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 187 |
| Conread position: | 110-373 |
| Cow position: | chr13:35653923-35654190 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 110-407 |
| Cow position: | chr13:56842724-56843021 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 116-377 |
| Cow position: | chr13:15192731-15192991 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 117-252 |
| Cow position: | chr13:4423326-4423466 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 117-265 |
| Cow position: | chr13:37558437-37558288 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 125, 110 |
| Conread position: | 117-268 |
| Cow position: | chr13:15869278-15869128 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 117-277 |
| Cow position: | chr13:6759636-6759799 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 13 |
| Conread position: | 117-374 |
| Cow position: | chr13:17622438-17622187 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 117-407 |
| Cow position: | chr13:12324947-12325237 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 118-300 |
| Cow position: | chr13:9593667-9593478 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 123-240 |
| Cow position: | chr13:22025557-22025675 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 123-277 |
| Cow position: | chr13:1839534-1839382 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 54, 126 |
| Conread position: | 123-300 |
| Cow position: | chr13:17568947-17569129 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 123-364 |
| Cow position: | chr13:6178195-6178439 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 164 |
| Conread position: | 123-407 |
| Cow position: | chr13:46636979-46637253 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 123, 63 |
| Conread position: | 123-483 |
| Cow position: | chr13:21276007-21275641 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 231, 54 |
| Conread position: | 124-254 |
| Cow position: | chr13:18696993-18696863 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 124-300 |
| Cow position: | chr13:41154881-41155061 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 75 |
| Conread position: | 124-374 |
| Cow position: | chr13:26698346-26698599 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 182 |
| Conread position: | 126-268 |
| Cow position: | chr13:37521231-37521374 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 127-254 |
| Cow position: | chr13:53566743-53566615 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 127-266 |
| Cow position: | chr13:5082798-5082661 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 127-266 |
| Cow position: | chr13:12618965-12619106 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 79 |
| Conread position: | 127-267 |
| Cow position: | chr13:45023064-45023204 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 127-272 |
| Cow position: | chr13:48037769-48037622 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 127-280 |
| Cow position: | chr13:311578-311427 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 127-284 |
| Cow position: | chr13:19022423-19022266 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 127-294 |
| Cow position: | chr13:12202513-12202350 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 127-300 |
| Cow position: | chr13:20706058-20706232 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 127-401 |
| Cow position: | chr13:4604439-4604162 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 69, 48 |
| Conread position: | 128-265 |
| Cow position: | chr13:21235540-21235677 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 128-268 |
| Cow position: | chr13:17800219-17800078 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 128-272 |
| Cow position: | chr13:24369727-24369580 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 128-275 |
| Cow position: | chr13:562996-563148 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 128-282 |
| Cow position: | chr13:6153636-6153789 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 13 |
| Conread position: | 128-299 |
| Cow position: | chr13:6945515-6945345 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 130 |
| Conread position: | 128-300 |
| Cow position: | chr13:9125817-9125638 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 128-300 |
| Cow position: | chr13:50739313-50739137 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 65 |
| Conread position: | 128-300 |
| Cow position: | chr13:55583342-55583169 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 128-363 |
| Cow position: | chr13:14717190-14717430 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 128-374 |
| Cow position: | chr13:4208671-4208914 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 121, 76 |
| Conread position: | 128-379 |
| Cow position: | chr13:47188590-47188332 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 128-389 |
| Cow position: | chr13:1636152-1635890 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 128-407 |
| Cow position: | chr13:1368161-1367883 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 128-407 |
| Cow position: | chr13:22277023-22277315 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 128-407 |
| Cow position: | chr13:24373545-24373289 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 205, 47 |
| Conread position: | 128-407 |
| Cow position: | chr13:47590999-47591265 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 128-483 |
| Cow position: | chr13:1959154-1958811 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 128-574 |
| Cow position: | chr13:39487199-39487632 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 48 |
| Conread position: | 129-268 |
| Cow position: | chr13:24280388-24280251 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 129-374 |
| Cow position: | chr13:16343830-16343593 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 129-378 |
| Cow position: | chr13:29631000-29630749 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 128, 16 |
| Conread position: | 130-288 |
| Cow position: | chr13:60487315-60487479 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 130-296 |
| Cow position: | chr13:33975562-33975398 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 45, 83 |
| Conread position: | 130-317 |
| Cow position: | chr13:42071158-42070972 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 129, 14 |
| Conread position: | 130-379 |
| Cow position: | chr13:52251652-52251907 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 154-369 |
| Cow position: | chr13:46465087-46464870 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 161-407 |
| Cow position: | chr13:1846012-1845769 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 16 |
| Conread position: | 212-407 |
| Cow position: | chr13:25956584-25956389 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 79, 108 |
| Conread position: | 238-407 |
| Cow position: | chr13:46349464-46349634 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 273-574 |
| Cow position: | chr13:34265092-34264781 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 406-567 |
| Cow position: | chr13:38362129-38361972 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 46 |
| Conread position: | 406-574 |
| Cow position: | chr13:47325754-47325584 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 80, 46 |
| Conread position: | 406-574 |
| Cow position: | chr13:55406815-55406977 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 139, 29 |
| Conread position: | 416-574 |
| Cow position: | chr13:44144255-44144097 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 132, 38 |
| Conread position: | 429-574 |
| Cow position: | chr13:15489590-15489736 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 26 |
Show alignments to all cow chromosomes.