Cow genome map

Conread name: Ss1.1-Thy1-THY010205G02.5

Conread position: 72-293
Cow position: chr14:20745841-20745616 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 147

Conread position: 73-405
Cow position: chr14:45018222-45018573 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 29, 156

Conread position: 101-521
Cow position: chr14:44772440-44772038 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 284
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 94

Conread position: 105-293
Cow position: chr14:26628060-26627870 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 24

Conread position: 105-299
Cow position: chr14:33337256-33337452 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 24

Conread position: 105-373
Cow position: chr14:37884188-37884453 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 26

Conread position: 105-379
Cow position: chr14:37678776-37679052 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 25

Conread position: 105-407
Cow position: chr14:23527159-23526862 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 162, 24

Conread position: 105-415
Cow position: chr14:40721702-40722007 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 150, 25

Conread position: 106-407
Cow position: chr14:14834904-14835212 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 44, 23

Conread position: 108-266
Cow position: chr14:38355412-38355251 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 96

Conread position: 109-255
Cow position: chr14:21018340-21018188 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 109-267
Cow position: chr14:34221282-34221117 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 112

Conread position: 109-272
Cow position: chr14:29606008-29606174 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 72

Conread position: 109-293
Cow position: chr14:31888478-31888666 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 44

Conread position: 109-363
Cow position: chr14:18448781-18449042 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 209

Conread position: 109-363
Cow position: chr14:47974207-47973951 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 150

Conread position: 109-389
Cow position: chr14:46782166-46782454 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 20, 217

Conread position: 109-407
Cow position: chr14:3437219-3436912 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 211

Conread position: 109-407
Cow position: chr14:3588217-3588517 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 58

Conread position: 109-407
Cow position: chr14:12643525-12643832 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 22, 222

Conread position: 109-407
Cow position: chr14:21863802-21864108 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 100

Conread position: 109-407
Cow position: chr14:37983162-37983481 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 66, 25

Conread position: 109-475
Cow position: chr14:21691052-21691408 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 240
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 19

Conread position: 110-267
Cow position: chr14:37333918-37333758 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 141

Conread position: 111-262
Cow position: chr14:9875615-9875461 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 111-269
Cow position: chr14:12488476-12488639 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 111-278
Cow position: chr14:37624262-37624434 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 34

Conread position: 111-285
Cow position: chr14:17899710-17899532 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 70, 130

Conread position: 111-491
Cow position: chr14:14182568-14182184 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 248
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 68

Conread position: 112-406
Cow position: chr14:32581157-32581455 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 51

Conread position: 114-389
Cow position: chr14:47043660-47043926 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 51

Conread position: 115-407
Cow position: chr14:9255085-9255382 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 81

Conread position: 116-280
Cow position: chr14:22952777-22952940 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 85

Conread position: 116-379
Cow position: chr14:19863219-19863482 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 25

Conread position: 117-300
Cow position: chr14:39770019-39770204 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 12

Conread position: 117-300
Cow position: chr14:39821378-39821191 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 12

Conread position: 117-315
Cow position: chr14:18904397-18904594 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 12

Conread position: 117-574
Cow position: chr14:27578574-27579038 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 322
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 25

Conread position: 119-277
Cow position: chr14:26108846-26108687 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 91

Conread position: 123-277
Cow position: chr14:8101998-8101845 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 78

Conread position: 123-277
Cow position: chr14:43046356-43046204 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 31

Conread position: 123-364
Cow position: chr14:43865722-43865958 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 149, 54

Conread position: 123-389
Cow position: chr14:40737460-40737720 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 50, 134

Conread position: 123-389
Cow position: chr14:44482855-44483116 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 109, 54

Conread position: 127-235
Cow position: chr14:20666819-20666928 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 72

Conread position: 127-257
Cow position: chr14:35819407-35819535 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 127-259
Cow position: chr14:1645987-1646120 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 72

Conread position: 127-261
Cow position: chr14:40433124-40432989 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 18

Conread position: 127-266
Cow position: chr14:16256971-16256834 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 72

Conread position: 127-267
Cow position: chr14:26442137-26442278 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 120, 70

Conread position: 127-269
Cow position: chr14:42154759-42154904 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 69

Conread position: 127-271
Cow position: chr14:41211058-41210913 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 69

Conread position: 127-284
Cow position: chr14:20640422-20640578 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 73

Conread position: 127-288
Cow position: chr14:23107534-23107370 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 127

Conread position: 128-267
Cow position: chr14:35711974-35712117 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 128-277
Cow position: chr14:34777376-34777524 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 66

Conread position: 128-277
Cow position: chr14:36554951-36555100 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 61, 112

Conread position: 128-295
Cow position: chr14:32452457-32452286 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 53, 73

Conread position: 128-300
Cow position: chr14:10906919-10906744 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 84

Conread position: 128-300
Cow position: chr14:45605295-45605124 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 72

Conread position: 128-319
Cow position: chr14:14221976-14221780 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 154

Conread position: 128-319
Cow position: chr14:37138128-37138320 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 70

Conread position: 128-363
Cow position: chr14:25378290-25378529 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 146

Conread position: 128-366
Cow position: chr14:19618548-19618788 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 131, 109

Conread position: 128-372
Cow position: chr14:23729526-23729758 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 45

Conread position: 128-398
Cow position: chr14:39302162-39302425 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 132, 88

Conread position: 128-402
Cow position: chr14:27988854-27988583 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 189

Conread position: 128-403
Cow position: chr14:28007809-28007541 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 75

Conread position: 128-404
Cow position: chr14:25362548-25362272 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 49, 37

Conread position: 128-407
Cow position: chr14:15011257-15011541 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 120

Conread position: 128-407
Cow position: chr14:35605108-35605393 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 51, 92

Conread position: 128-407
Cow position: chr14:39807258-39807535 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 182, 49

Conread position: 128-477
Cow position: chr14:41654195-41654547 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 80

Conread position: 128-530
Cow position: chr14:46545797-46546205 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 277
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 67, 45

Conread position: 130-297
Cow position: chr14:19394562-19394396 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 71

Conread position: 130-305
Cow position: chr14:15514218-15514038 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 153

Conread position: 130-357
Cow position: chr14:8488383-8488161 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 118, 47

Conread position: 130-407
Cow position: chr14:18984701-18984971 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 11

Conread position: 130-475
Cow position: chr14:35700629-35700296 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 227
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 202

Conread position: 136-383
Cow position: chr14:42694124-42693881 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 41

Conread position: 153-407
Cow position: chr14:9051411-9051163 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 163, 24

Conread position: 155-576
Cow position: chr14:40244337-40243912 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 24

Conread position: 172-407
Cow position: chr14:25993817-25994035 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 24

Conread position: 192-380
Cow position: chr14:8903479-8903664 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 120

Conread position: 194-360
Cow position: chr14:47908182-47908012 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 50

Conread position: 196-407
Cow position: chr14:24989270-24989049 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 61

Conread position: 199-407
Cow position: chr14:39616761-39616971 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 58, 113

Conread position: 406-574
Cow position: chr14:42693548-42693389 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 406-574
Cow position: chr14:45185248-45185082 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 434-571
Cow position: chr14:42258835-42258698 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 111, 18

Conread position: 435-573
Cow position: chr14:24739129-24738988 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 110, 20

Show alignments to all cow chromosomes.